Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_D14
(790 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC026184-1|AAH26184.2| 490|Homo sapiens C19orf2 protein protein. 67 6e-11
BC067259-1|AAH67259.1| 494|Homo sapiens chromosome 19 open read... 66 1e-10
AB006572-1|BAA34781.1| 508|Homo sapiens RPB5 meidating protein ... 66 1e-10
AF091095-1|AAD08679.1| 458|Homo sapiens NNX3 protein. 60 9e-09
Y17394-1|CAA76761.1| 197|Homo sapiens prefoldin subunit 3 protein. 33 1.6
U96759-1|AAC23907.1| 160|Homo sapiens von Hippel-Lindau binding... 33 1.6
U56833-1|AAC50617.1| 166|Homo sapiens VHL binding protein-1 pro... 33 1.6
CR541932-1|CAG46730.1| 160|Homo sapiens VBP1 protein. 33 1.6
BT019604-1|AAV38411.1| 197|Homo sapiens von Hippel-Lindau bindi... 33 1.6
BC046094-1|AAH46094.1| 197|Homo sapiens von Hippel-Lindau bindi... 33 1.6
AL356738-8|CAI41469.1| 197|Homo sapiens von Hippel-Lindau bindi... 32 2.7
Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease... 30 8.3
EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein. 30 8.3
AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disea... 30 8.3
AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disea... 30 8.3
AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disea... 30 8.3
>BC026184-1|AAH26184.2| 490|Homo sapiens C19orf2 protein protein.
Length = 490
Score = 67.3 bits (157), Expect = 6e-11
Identities = 47/166 (28%), Positives = 76/166 (45%), Gaps = 13/166 (7%)
Frame = +2
Query: 137 KHLQFWVNYLKXLRALD--LNVFADKLTVPTLVPIGNRILFRGEIIHTNEITVSLGADYF 310
+ +Q W AL L+ DKL+ +VP G G+++HTNE+TV LG ++F
Sbjct: 44 ERIQHWKKVDNDYNALRERLSTLPDKLSYNIMVPFGPFAFMPGKLVHTNEVTVLLGDNWF 103
Query: 311 AKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLKSQIAFSN--ENIYGTKAXXXXXXXXX 484
AKCS KQA L +HR + +D +K +S++ F+ + +
Sbjct: 104 AKCSAKQAVGLVEHRKEHVRKTIDDLKKVMKNFESRVEFTEDLQKMSDAAGDIVDIREEI 163
Query: 485 XXDKAWRIKHRQNVRKYKK---------DQQIQEKINNLISDEELW 595
D ++ KHR + + K D K +L++D+ELW
Sbjct: 164 KCDFEFKAKHRIAHKPHSKPKTSDIFEADIANDVKSKDLLADKELW 209
>BC067259-1|AAH67259.1| 494|Homo sapiens chromosome 19 open reading
frame 2 protein.
Length = 494
Score = 66.5 bits (155), Expect = 1e-10
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Frame = +2
Query: 188 LNVFADKLTVPTLVPIGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDA 367
L+ DKL+ +VP G G+++HTNE+TV LG ++FAKCS KQA L +HR +
Sbjct: 25 LSTLPDKLSYNIMVPFGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHV 84
Query: 368 ETKVDMYEKEYDYLKSQIAFSN--ENIYGTKAXXXXXXXXXXXDKAWRIKHRQNVRKYKK 541
+D +K +S++ F+ + + D ++ KHR + + K
Sbjct: 85 RKTIDDLKKVMKNFESRVEFTEDLQKMSDAAGDIVDIREEIKCDFEFKAKHRIAHKPHSK 144
Query: 542 ---------DQQIQEKINNLISDEELW 595
D K +L++D+ELW
Sbjct: 145 PKTSDIFEADIANDVKSKDLLADKELW 171
>AB006572-1|BAA34781.1| 508|Homo sapiens RPB5 meidating protein
protein.
Length = 508
Score = 66.5 bits (155), Expect = 1e-10
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Frame = +2
Query: 188 LNVFADKLTVPTLVPIGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDA 367
L+ DKL+ +VP G G+++HTNE+TV LG ++FAKCS KQA L +HR +
Sbjct: 39 LSTLPDKLSYNIMVPFGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHV 98
Query: 368 ETKVDMYEKEYDYLKSQIAFSN--ENIYGTKAXXXXXXXXXXXDKAWRIKHRQNVRKYKK 541
+D +K +S++ F+ + + D ++ KHR + + K
Sbjct: 99 RKTIDDLKKVMKNFESRVEFTEDLQKMSDAAGDIVDIREEIKCDFEFKAKHRIAHKPHSK 158
Query: 542 ---------DQQIQEKINNLISDEELW 595
D K +L++D+ELW
Sbjct: 159 PKTSDIFEADIANDVKSKDLLADKELW 185
>AF091095-1|AAD08679.1| 458|Homo sapiens NNX3 protein.
Length = 458
Score = 60.1 bits (139), Expect = 9e-09
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Frame = +2
Query: 224 LVPIGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYD 403
+VP G G+++HTNE+TV LG ++FAKCS KQA L +HR + +D +K
Sbjct: 1 MVPFGPFAFMPGKLVHTNEVTVLLGDNWFAKCSAKQAVGLVEHRKEHVRKTIDDLKKVMK 60
Query: 404 YLKSQIAFSN--ENIYGTKAXXXXXXXXXXXDKAWRIKHRQNVRKYKK---------DQQ 550
+S++ F+ + + D ++ KHR + + K D
Sbjct: 61 NFESRVEFTEDLQKMSDAAGDIVDIREEIKCDFEFKAKHRIAHKPHSKPKTSDIFEADIA 120
Query: 551 IQEKINNLISDEELW 595
K +L++D+ELW
Sbjct: 121 NDVKSKDLLADKELW 135
>Y17394-1|CAA76761.1| 197|Homo sapiens prefoldin subunit 3 protein.
Length = 197
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/70 (18%), Positives = 36/70 (51%)
Frame = +2
Query: 233 IGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLK 412
+ + + + + T+++ + LGA+ + + +A+ L + + A +D E++ D+L+
Sbjct: 107 LADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLR 166
Query: 413 SQIAFSNENI 442
Q + N+
Sbjct: 167 DQFTTTEVNM 176
>U96759-1|AAC23907.1| 160|Homo sapiens von Hippel-Lindau binding
protein protein.
Length = 160
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/70 (18%), Positives = 36/70 (51%)
Frame = +2
Query: 233 IGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLK 412
+ + + + + T+++ + LGA+ + + +A+ L + + A +D E++ D+L+
Sbjct: 70 LADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLR 129
Query: 413 SQIAFSNENI 442
Q + N+
Sbjct: 130 DQFTTTEVNM 139
>U56833-1|AAC50617.1| 166|Homo sapiens VHL binding protein-1
protein.
Length = 166
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/70 (18%), Positives = 36/70 (51%)
Frame = +2
Query: 233 IGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLK 412
+ + + + + T+++ + LGA+ + + +A+ L + + A +D E++ D+L+
Sbjct: 76 LADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLR 135
Query: 413 SQIAFSNENI 442
Q + N+
Sbjct: 136 DQFTTTEVNM 145
>CR541932-1|CAG46730.1| 160|Homo sapiens VBP1 protein.
Length = 160
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/70 (18%), Positives = 36/70 (51%)
Frame = +2
Query: 233 IGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLK 412
+ + + + + T+++ + LGA+ + + +A+ L + + A +D E++ D+L+
Sbjct: 70 LADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLR 129
Query: 413 SQIAFSNENI 442
Q + N+
Sbjct: 130 DQFTTTEVNM 139
>BT019604-1|AAV38411.1| 197|Homo sapiens von Hippel-Lindau binding
protein 1 protein.
Length = 197
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/70 (18%), Positives = 36/70 (51%)
Frame = +2
Query: 233 IGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLK 412
+ + + + + T+++ + LGA+ + + +A+ L + + A +D E++ D+L+
Sbjct: 107 LADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLR 166
Query: 413 SQIAFSNENI 442
Q + N+
Sbjct: 167 DQFTTTEVNM 176
>BC046094-1|AAH46094.1| 197|Homo sapiens von Hippel-Lindau binding
protein 1 protein.
Length = 197
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/70 (18%), Positives = 36/70 (51%)
Frame = +2
Query: 233 IGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLK 412
+ + + + + T+++ + LGA+ + + +A+ L + + A +D E++ D+L+
Sbjct: 107 LADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLR 166
Query: 413 SQIAFSNENI 442
Q + N+
Sbjct: 167 DQFTTTEVNM 176
>AL356738-8|CAI41469.1| 197|Homo sapiens von Hippel-Lindau binding
protein 1 protein.
Length = 197
Score = 31.9 bits (69), Expect = 2.7
Identities = 13/70 (18%), Positives = 36/70 (51%)
Frame = +2
Query: 233 IGNRILFRGEIIHTNEITVSLGADYFAKCSLKQAEILKQHRIKDAETKVDMYEKEYDYLK 412
+ + + + + T+++ + LGA+ + + +A+ L + + A +D E++ D+L+
Sbjct: 107 LADNLYCKASVPPTDKMCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLR 166
Query: 413 SQIAFSNENI 442
Q + N+
Sbjct: 167 DQFTTTEVNM 176
>Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 424 CYLTFQIIIFFFVHIYFGFSIFYSMLF*YLGLFQRT 317
C++ F + ++FFV++ FG+ +F + Y L T
Sbjct: 2090 CHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHST 2125
>EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.
Length = 2255
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 424 CYLTFQIIIFFFVHIYFGFSIFYSMLF*YLGLFQRT 317
C++ F + ++FFV++ FG+ +F + Y L T
Sbjct: 2092 CHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHST 2127
>AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 424 CYLTFQIIIFFFVHIYFGFSIFYSMLF*YLGLFQRT 317
C++ F + ++FFV++ FG+ +F + Y L T
Sbjct: 2090 CHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHST 2125
>AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disease
(polycystin) and REJ homolog (sperm receptor for egg
protein.
Length = 2253
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 424 CYLTFQIIIFFFVHIYFGFSIFYSMLF*YLGLFQRT 317
C++ F + ++FFV++ FG+ +F + Y L T
Sbjct: 2090 CHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHST 2125
>AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disease
and receptor for egg jelly related protein protein.
Length = 2253
Score = 30.3 bits (65), Expect = 8.3
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 424 CYLTFQIIIFFFVHIYFGFSIFYSMLF*YLGLFQRT 317
C++ F + ++FFV++ FG+ +F + Y L T
Sbjct: 2090 CHMAFVVSVYFFVYMAFGYLVFGQHEWNYSNLIHST 2125
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,348,526
Number of Sequences: 237096
Number of extensions: 1526634
Number of successful extensions: 3194
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3192
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9646050614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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