Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_D12
         (486 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2128|AAF49929.1|   95|Drosophila melanogaster CG10418-P...   163   1e-40
AY070862-1|AAL48484.2|  123|Drosophila melanogaster GM14851p pro...    69   3e-12
BT001620-1|AAN71375.1|  154|Drosophila melanogaster RE35747p pro...    48   9e-06
AE014134-1871|AAF52938.3|  154|Drosophila melanogaster CG17768-P...    48   9e-06

>AE014296-2128|AAF49929.1|   95|Drosophila melanogaster CG10418-PA
           protein.
          Length = 95

 Score =  163 bits (396), Expect = 1e-40
 Identities = 81/95 (85%), Positives = 83/95 (87%)
 Frame = +3

Query: 36  MLFSSFFKSLVGXAVVVXLXNALSICGPLHSVDQXLNIKLSDISVIDSEKYPHMLSVKNC 215
           MLF SFFKSLVG  VVV L N LSICG LHSVDQ LNIKL+DISV D +KYPHMLSVKNC
Sbjct: 1   MLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNC 60

Query: 216 FIRGSVVRYVQLPADEVDTQLLQDAARKEATVSTR 320
           FIRGSVVRYVQLP DEVDTQLLQDAARKEA VSTR
Sbjct: 61  FIRGSVVRYVQLPGDEVDTQLLQDAARKEAVVSTR 95


>AY070862-1|AAL48484.2|  123|Drosophila melanogaster GM14851p
           protein.
          Length = 123

 Score = 69.3 bits (162), Expect = 3e-12
 Identities = 38/100 (38%), Positives = 55/100 (55%)
 Frame = +2

Query: 35  NVVFLVFQIVSRXGCRRRAXKCPQHLWAVAFCGSXSQYKAFGYKRD*L*KVSSYVISEKL 214
           N + L+ Q+    G R    K PQH+W  A  GS  +++A GY+     +V  +   ++L
Sbjct: 13  NALLLLLQVAGGQGSRCGVEKRPQHMWHPALGGSVPEHQADGYQCHRSGQVPPHAERQEL 72

Query: 215 FYKRLRGSIRTTAG**GRHPASPGCR*KGGDRFNKIELNL 334
            +  LRG+IR  AG  G HPA+PGC  KGG   +KI + L
Sbjct: 73  LHPWLRGAIRAAAGRRGGHPAAPGCGAKGGCCEHKIRIPL 112


>BT001620-1|AAN71375.1|  154|Drosophila melanogaster RE35747p
           protein.
          Length = 154

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 29/88 (32%), Positives = 46/88 (52%)
 Frame = +3

Query: 36  MLFSSFFKSLVGXAVVVXLXNALSICGPLHSVDQXLNIKLSDISVIDSEKYPHMLSVKNC 215
           ML  S  K+     ++V L N  +  G L S D  +NI L D+ +  S+       +  C
Sbjct: 1   MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDV-ICTSKDGDRFWRMPEC 59

Query: 216 FIRGSVVRYVQLPADEVDTQLLQDAARK 299
           +IRGS ++Y+++P DEV   + +DA  K
Sbjct: 60  YIRGSTIKYLRIP-DEVIDMVKEDAQAK 86


>AE014134-1871|AAF52938.3|  154|Drosophila melanogaster CG17768-PA,
           isoform A protein.
          Length = 154

 Score = 47.6 bits (108), Expect = 9e-06
 Identities = 29/88 (32%), Positives = 46/88 (52%)
 Frame = +3

Query: 36  MLFSSFFKSLVGXAVVVXLXNALSICGPLHSVDQXLNIKLSDISVIDSEKYPHMLSVKNC 215
           ML  S  K+     ++V L N  +  G L S D  +NI L D+ +  S+       +  C
Sbjct: 1   MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDV-ICTSKDGDRFWRMPEC 59

Query: 216 FIRGSVVRYVQLPADEVDTQLLQDAARK 299
           +IRGS ++Y+++P DEV   + +DA  K
Sbjct: 60  YIRGSTIKYLRIP-DEVIDMVKEDAQAK 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,244,556
Number of Sequences: 53049
Number of extensions: 270405
Number of successful extensions: 618
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)