Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_D11
         (663 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    30   0.015
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    27   0.18 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    26   0.24 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.55 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   3.9  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    22   3.9  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   6.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   6.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   6.8  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   6.8  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   6.8  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   6.8  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   6.8  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   6.8  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   6.8  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    21   6.8  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   6.8  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   6.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.0  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 30.3 bits (65), Expect = 0.015
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 1/69 (1%)
 Frame = -3

Query: 223 SDDSVFDGVFEGQDTSFALCLVTYVRVLLSHTDHHAL-MAGPSDDRGEYGARSIXSCETG 47
           SD SV     +G  +S       Y      H DH  +    P+DDRG   A +    ET 
Sbjct: 131 SDPSV-SSCHQGFSSSTWCNYSAYSSASRHHVDHQPVPYLTPADDRGRVAAAAAMVAETA 189

Query: 46  LAHTGAIGY 20
             H  A GY
Sbjct: 190 SFHHDAAGY 198


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 11/37 (29%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +3

Query: 420 TRPVVPPVSCWTPATVSPTPYP-STRDTHSPTPSCVW 527
           T  + P ++CW+  +  P PY  S + T S +P+ ++
Sbjct: 314 TTVMSPTINCWSLTSSPPPPYQISAQPTPSQSPNQIY 350


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 26.2 bits (55), Expect = 0.24
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = +3

Query: 414 RCTRPVVPPVS-CWTPATVSPTPYPSTRDTHSP 509
           R  R VVPP   C  P+T+ P P     D++ P
Sbjct: 195 RSLRCVVPPTEDCDVPSTIPPPPPEEDDDSNIP 227


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.55
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +2

Query: 215 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 310
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 331 GQQREDDPDHVRNIQHARHVRRHPSRA 411
           GQ    DP+ V   +   H+  HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 453 TPATVSPTPYPSTRDTHSPTPSCVWTWPVA 542
           TP +V    YPS    HS +P+   T  +A
Sbjct: 314 TPTSVMTELYPSPVPGHSTSPNLPLTHNIA 343


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +1

Query: 184 PDPQIPHRTRNRH 222
           PD  +P RT NRH
Sbjct: 110 PDNFLPERTANRH 122


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -2

Query: 98  RRSRGIRREEHXLLRNRP 45
           +   G+R+  H L++N+P
Sbjct: 78  KHKEGVRKVLHHLIKNKP 95


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -2

Query: 299 RGVPRGRHAAHCRRYDAKSSP 237
           RG P    AA C +   KS P
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPP 53


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 253 MPNLLHVIPVSDDSVFD 203
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 253 MPNLLHVIPVSDDSVFD 203
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 253 MPNLLHVIPVSDDSVFD 203
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 253 MPNLLHVIPVSDDSVFD 203
           +P++  +IP  DD+  D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +3

Query: 381 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 518
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLSSPASS 172


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +3

Query: 381 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 518
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +3

Query: 381 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 518
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 655 ESDVAQLLLDITNDFP 608
           E++  ++LLD+ N FP
Sbjct: 470 EAEEVKILLDVINHFP 485


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +3

Query: 381 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 518
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +3

Query: 381 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 518
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +3

Query: 381 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 518
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 83  PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 128


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +3

Query: 381 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 518
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +3

Query: 381 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPYPSTRDTHSPTPS 518
           PP ++PS   +  +  +  P+S  T     P    ++++  SP  S
Sbjct: 127 PPLSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTASQNLSSPASS 172


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 116 PDGGAFRRSRGIRREEHXLLRNRPCT 39
           P G  F  ++  R+E      + PCT
Sbjct: 669 PSGDCFYENKFYRQEAQWTSSDNPCT 694


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,373
Number of Sequences: 336
Number of extensions: 4095
Number of successful extensions: 27
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)