Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_D10
(769 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 410 e-114
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 410 e-114
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 410 e-114
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 409 e-114
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 409 e-114
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 409 e-114
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 409 e-114
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 409 e-114
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 344 2e-94
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 215 2e-55
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 42 0.002
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 42 0.003
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 42 0.003
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 39 0.017
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 30 7.9
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 410 bits (1009), Expect = e-114
Identities = 188/240 (78%), Positives = 209/240 (87%)
Frame = +1
Query: 49 MGRVIRAQRQGAGSVFVSHTHXRXGAPKLRSLAYAERHGYIKGVVKDIIHDPGRGAPLAV 228
MGRVIR QR+GAGSVF +H R GA +LR++ +AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 229 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 408
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 409 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 588
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 589 KAGRAYHKYKVKRNCWPYVRGVAMNPVXHPHGGGNHQHIGKASTVXRGTSAGRKVGLIAA 768
KAGRAYHKYK KRNCWP VRGVAMNPV HP GGGNHQHIGK ST+ R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 410 bits (1009), Expect = e-114
Identities = 188/240 (78%), Positives = 209/240 (87%)
Frame = +1
Query: 49 MGRVIRAQRQGAGSVFVSHTHXRXGAPKLRSLAYAERHGYIKGVVKDIIHDPGRGAPLAV 228
MGRVIR QR+GAGSVF +H R GA +LR++ +AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 229 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 408
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 409 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 588
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 589 KAGRAYHKYKVKRNCWPYVRGVAMNPVXHPHGGGNHQHIGKASTVXRGTSAGRKVGLIAA 768
KAGRAYHKYK KRNCWP VRGVAMNPV HP GGGNHQHIGK ST+ R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 410 bits (1009), Expect = e-114
Identities = 188/240 (78%), Positives = 209/240 (87%)
Frame = +1
Query: 49 MGRVIRAQRQGAGSVFVSHTHXRXGAPKLRSLAYAERHGYIKGVVKDIIHDPGRGAPLAV 228
MGRVIR QR+GAGSVF +H R GA +LR++ +AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 229 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 408
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKP 120
Query: 409 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 588
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 589 KAGRAYHKYKVKRNCWPYVRGVAMNPVXHPHGGGNHQHIGKASTVXRGTSAGRKVGLIAA 768
KAGRAYHKYK KRNCWP VRGVAMNPV HP GGGNHQHIGK ST+ R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 409 bits (1008), Expect = e-114
Identities = 187/240 (77%), Positives = 209/240 (87%)
Frame = +1
Query: 49 MGRVIRAQRQGAGSVFVSHTHXRXGAPKLRSLAYAERHGYIKGVVKDIIHDPGRGAPLAV 228
MGRVIR QR+GAGSVF +H R GA +LR++ +AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 229 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 408
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 409 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 588
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 589 KAGRAYHKYKVKRNCWPYVRGVAMNPVXHPHGGGNHQHIGKASTVXRGTSAGRKVGLIAA 768
KAGRAYHKYK KRNCWP VRGVAMNPV HP GGGNHQHIGK ST+ R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 409 bits (1008), Expect = e-114
Identities = 187/240 (77%), Positives = 209/240 (87%)
Frame = +1
Query: 49 MGRVIRAQRQGAGSVFVSHTHXRXGAPKLRSLAYAERHGYIKGVVKDIIHDPGRGAPLAV 228
MGRVIR QR+GAGSVF +H R GA +LR++ +AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 229 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 408
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 409 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 588
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 589 KAGRAYHKYKVKRNCWPYVRGVAMNPVXHPHGGGNHQHIGKASTVXRGTSAGRKVGLIAA 768
KAGRAYHKYK KRNCWP VRGVAMNPV HP GGGNHQHIGK ST+ R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 409 bits (1008), Expect = e-114
Identities = 187/240 (77%), Positives = 209/240 (87%)
Frame = +1
Query: 49 MGRVIRAQRQGAGSVFVSHTHXRXGAPKLRSLAYAERHGYIKGVVKDIIHDPGRGAPLAV 228
MGRVIR QR+GAGSVF +H R GA +LR++ +AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 229 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 408
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 409 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 588
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 589 KAGRAYHKYKVKRNCWPYVRGVAMNPVXHPHGGGNHQHIGKASTVXRGTSAGRKVGLIAA 768
KAGRAYHKYK KRNCWP VRGVAMNPV HP GGGNHQHIGK ST+ R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 409 bits (1008), Expect = e-114
Identities = 187/240 (77%), Positives = 209/240 (87%)
Frame = +1
Query: 49 MGRVIRAQRQGAGSVFVSHTHXRXGAPKLRSLAYAERHGYIKGVVKDIIHDPGRGAPLAV 228
MGRVIR QR+GAGSVF +H R GA +LR++ +AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 229 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 408
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 409 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 588
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 589 KAGRAYHKYKVKRNCWPYVRGVAMNPVXHPHGGGNHQHIGKASTVXRGTSAGRKVGLIAA 768
KAGRAYHKYK KRNCWP VRGVAMNPV HP GGGNHQHIGK ST+ R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 409 bits (1008), Expect = e-114
Identities = 187/240 (77%), Positives = 209/240 (87%)
Frame = +1
Query: 49 MGRVIRAQRQGAGSVFVSHTHXRXGAPKLRSLAYAERHGYIKGVVKDIIHDPGRGAPLAV 228
MGRVIR QR+GAGSVF +H R GA +LR++ +AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 229 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 408
V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK
Sbjct: 61 VVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKP 120
Query: 409 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 588
GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPIL
Sbjct: 121 GDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPIL 180
Query: 589 KAGRAYHKYKVKRNCWPYVRGVAMNPVXHPHGGGNHQHIGKASTVXRGTSAGRKVGLIAA 768
KAGRAYHKYK KRNCWP VRGVAMNPV HP GGGNHQHIGK ST+ R AGRKVGLIAA
Sbjct: 181 KAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 344 bits (845), Expect = 2e-94
Identities = 156/194 (80%), Positives = 171/194 (88%)
Frame = +1
Query: 187 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 366
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 367 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 546
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +V
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVV 120
Query: 547 GIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVXHPHGGGNHQHIGKASTVX 726
G+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAMNPV HP GGGNHQHIGK ST+
Sbjct: 121 GVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIR 180
Query: 727 RGTSAGRKVGLIAA 768
R AGRKVGLIAA
Sbjct: 181 RDAPAGRKVGLIAA 194
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 215 bits (524), Expect = 2e-55
Identities = 98/130 (75%), Positives = 112/130 (86%)
Frame = +1
Query: 61 IRAQRQGAGSVFVSHTHXRXGAPKLRSLAYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 240
IR QR+GAGSVF +H R GA +LR++ +AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 241 DPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRG 420
DPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG
Sbjct: 61 DPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRG 120
Query: 421 RLARASGNFA 450
+LARASGN+A
Sbjct: 121 KLARASGNYA 130
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 42.3 bits (95), Expect = 0.002
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Frame = +1
Query: 157 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 324
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 325 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 501
A G+ P+GA+P GT++ N+E + G + RA+G ++ + ++LP
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGHSIIQLP 229
Query: 502 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 600
S + + + VG V+ + I KAGR
Sbjct: 230 SKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.003
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Frame = +1
Query: 157 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 324
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 325 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 501
A G+ P+GA+P GT++ N+E + G + RA+G ++ ++LP
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLP 229
Query: 502 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 600
S + + + VG V+ + I KAGR
Sbjct: 230 SKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.003
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Frame = +1
Query: 157 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 324
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 325 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 501
A G+ P+GA+P GT++ N+E + G + RA+G ++ ++LP
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLP 229
Query: 502 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 600
S + + + VG V+ + I KAGR
Sbjct: 230 SKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 39.1 bits (87), Expect = 0.017
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +1
Query: 259 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 423
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 424 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 600
RA+G ++ ++LPS + + + VG V+ + I KAGR
Sbjct: 203 YIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 259
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 30.3 bits (65), Expect = 7.9
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -3
Query: 629 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPL 534
L LT +L+ A P F++ +S+ PPP ++P P+
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,133,119
Number of Sequences: 237096
Number of extensions: 2878208
Number of successful extensions: 6272
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6271
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9255747988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -