Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_D08
(547 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0871 - 20441689-20441756,20442220-20442349,20442422-204425... 184 4e-47
02_04_0100 - 19730137-19730237,19731215-19731344,19731419-197315... 171 2e-43
02_01_0469 - 3359156-3359500,3359595-3359680,3359766-3359811,335... 161 3e-40
02_01_0045 + 307058-307552,308670-308716,308779-308866,309664-30... 50 1e-06
08_02_0250 + 14772746-14773037,14773141-14773203,14773458-147736... 30 1.4
05_05_0375 + 24486056-24487333 28 4.2
04_01_0173 + 1958281-1958802 28 4.2
12_01_0916 + 8959866-8959958,8960429-8960583,8960676-8961055,896... 28 5.6
09_03_0201 - 13466189-13466422,13466508-13467280,13467490-134676... 28 5.6
06_03_0265 - 18923597-18924367,18924459-18924704 28 5.6
09_04_0520 + 18286435-18287279,18287818-18288697 27 7.4
09_04_0006 - 13632902-13633026,13634013-13634179,13634286-136344... 27 7.4
08_02_1092 + 24267737-24268641,24269005-24269884 27 7.4
07_03_0562 + 19535801-19535865,19535972-19536017,19536125-195362... 27 7.4
05_03_0656 - 16676406-16676654 27 7.4
12_01_0418 - 3304741-3304904,3305579-3305762,3307254-3307347,330... 27 9.8
06_03_0263 - 18910447-18911217,18911311-18911556 27 9.8
05_03_0175 + 9222749-9222819,9223045-9223116,9223426-9223497,922... 27 9.8
02_03_0016 + 13962086-13962326,13962529-13962614,13962652-139627... 27 9.8
02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,879... 27 9.8
>04_03_0871 -
20441689-20441756,20442220-20442349,20442422-20442507,
20444271-20444316,20444425-20444547,20445302-20445370
Length = 173
Score = 184 bits (448), Expect = 4e-47
Identities = 94/138 (68%), Positives = 103/138 (74%)
Frame = +3
Query: 48 RVKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 227
R K + KEE VTLGP GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGMKV
Sbjct: 26 RKKTREPKEE-NVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 84
Query: 228 KADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXX 407
KADRDE+SPYAAMLA+QDVA++CK LGITALHIKLRA AQ
Sbjct: 85 KADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 144
Query: 408 XMKIGRIEDVTPVPSDST 461
MKIGRIEDVTPVP+DST
Sbjct: 145 GMKIGRIEDVTPVPTDST 162
>02_04_0100 -
19730137-19730237,19731215-19731344,19731419-19731504,
19732410-19732455,19732558-19732680,19732779-19732781
Length = 162
Score = 171 bits (417), Expect = 2e-43
Identities = 94/149 (63%), Positives = 103/149 (69%), Gaps = 11/149 (7%)
Frame = +3
Query: 48 RVKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKV 227
R K + KEE VTLGP GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGMKV
Sbjct: 4 RKKTREPKEE-NVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKV 62
Query: 228 KADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXX 407
KADRDE+SPYAAMLA+QDVA++CK LGITALHIKLRA AQ
Sbjct: 63 KADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARS 122
Query: 408 XMKIGRI-----------EDVTPVPSDST 461
MKIGRI EDVTPVP+DST
Sbjct: 123 GMKIGRIADDVLSIFCHTEDVTPVPTDST 151
>02_01_0469 -
3359156-3359500,3359595-3359680,3359766-3359811,
3359897-3360016,3360622-3360624
Length = 199
Score = 161 bits (391), Expect = 3e-40
Identities = 83/125 (66%), Positives = 91/125 (72%)
Frame = +3
Query: 54 KNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKA 233
K + KEE VTLGP GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGMKVKA
Sbjct: 5 KTREPKEE-NVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKA 63
Query: 234 DRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRAXXXXXXXXXXXXAQXXXXXXXXXXM 413
DRDE+SPYAAMLA+QDVA++CK LGITALHIKLRA AQ M
Sbjct: 64 DRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGM 123
Query: 414 KIGRI 428
KIGRI
Sbjct: 124 KIGRI 128
>02_01_0045 +
307058-307552,308670-308716,308779-308866,309664-309756,
309788-309950,310554-310627,310889-310927
Length = 332
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 207 VTGGMKVKADRDEASPYAAMLAAQDVAEKCK 299
V GGMK+KAD DE+SPYAAML +QDVA CK
Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCK 241
Score = 29.5 bits (63), Expect = 1.8
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 207 VTGGMKVKADRDEASPYAAMLAAQDVA 287
V GGM +K+D DE SP+ + + D++
Sbjct: 166 VGGGMNIKSDCDEPSPHCSCVGQTDIS 192
>08_02_0250 +
14772746-14773037,14773141-14773203,14773458-14773621,
14774126-14774220,14774517-14774728,14774972-14775009,
14775131-14775424,14775510-14775617
Length = 421
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = +2
Query: 314 GLAHKAPCYWWKQNKDPWSWCSVCTSGSCSFKYEDWP 424
G H PC+ W + W WC SG C + WP
Sbjct: 345 GKPHGWPCWGW-DGAEMWLWCQSKNSGHC---HIGWP 377
>05_05_0375 + 24486056-24487333
Length = 425
Score = 28.3 bits (60), Expect = 4.2
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +3
Query: 30 KAEPWPRVKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLS 185
+A PW R + V + V L P H G T A + A + VHV DLS
Sbjct: 108 RAPPWGRAMS-VTELADYVDLTPWHRFGFTASNAAILRAVAGASAVHVVDLS 158
>04_01_0173 + 1958281-1958802
Length = 173
Score = 28.3 bits (60), Expect = 4.2
Identities = 29/80 (36%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Frame = +3
Query: 33 AEPWPRVKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTD-LSGRETIARV 209
AEPWPR + VAK V LG L +G S TFV T SG T R
Sbjct: 89 AEPWPRCRG-VAK----VDLGTGELAAVHEYGEGRF--SGEPTFVPATSATSGTGTGGRE 141
Query: 210 TGGMKVKADRDEASPYAAML 269
G V DEA+ A ++
Sbjct: 142 DDGHVVVMVHDEAAGTAELV 161
>12_01_0916 +
8959866-8959958,8960429-8960583,8960676-8961055,
8961142-8962122,8962699-8962829
Length = 579
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 96 PQHLVGETVFGVAHIFASFNDTF----VHVTDLSGRETIARVTGGMKV 227
P HL G F +A F ++N+T ++ D R T+A TGG V
Sbjct: 481 PMHLHGFNFFVLAQGFGNYNETTDPAKFNLVDPQERNTVAVPTGGWAV 528
>09_03_0201 -
13466189-13466422,13466508-13467280,13467490-13467637,
13468176-13468313
Length = 430
Score = 27.9 bits (59), Expect = 5.6
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 327 LCARPLCQEFCISLLHPV 274
LC R LC+EFC+ + P+
Sbjct: 51 LCTRDLCEEFCLLRISPL 68
>06_03_0265 - 18923597-18924367,18924459-18924704
Length = 338
Score = 27.9 bits (59), Expect = 5.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 182 IRPGNYRPCHWWHEGEG*P**SVTLRCYVGGT 277
++ GN RP HWW E V L+C V T
Sbjct: 311 VKMGNIRPKHWWTPAE------VRLKCSVANT 336
>09_04_0520 + 18286435-18287279,18287818-18288697
Length = 574
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 136 CATPNTVSPTKCWGPR 89
C P+ V+PT C+GPR
Sbjct: 364 CIQPSCVAPTTCFGPR 379
>09_04_0006 -
13632902-13633026,13634013-13634179,13634286-13634437,
13634564-13634672,13635096-13635280,13635372-13635687,
13635796-13635903,13635994-13636139,13636223-13636237
Length = 440
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +2
Query: 299 NSWHNGLAHKAPCYWWKQNKDPWSWC 376
+ W GL +P Y + N D + WC
Sbjct: 305 DGWQEGLITFSPTYKYHPNSDQYYWC 330
>08_02_1092 + 24267737-24268641,24269005-24269884
Length = 594
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -1
Query: 136 CATPNTVSPTKCWGPR 89
C P+ V+PT C+GPR
Sbjct: 384 CIQPSCVAPTTCFGPR 399
>07_03_0562 + 19535801-19535865,19535972-19536017,19536125-19536223,
19536588-19536674,19537545-19537613,19537702-19538710,
19539217-19539365,19539453-19540487,19540488-19541003
Length = 1024
Score = 27.5 bits (58), Expect = 7.4
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = -1
Query: 253 GDASSRSAFTFMPPVTRAIVSRPDKSVT*TNVSLNEAKMCATPNTVSPT 107
G SSR+ F+ PP R S P V + +S A + P VSPT
Sbjct: 860 GPDSSRNIFSAFPPAVRENQSIPSAPVAQSWISFG-ASSESKPTIVSPT 907
>05_03_0656 - 16676406-16676654
Length = 82
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 269 GGTGCSREMQNSWHNGLAHKAPCYWWKQNKD 361
GG G + + H+GLA A +WW D
Sbjct: 33 GGGGGEAASRRAGHSGLASGARGWWWNSGDD 63
>12_01_0418 -
3304741-3304904,3305579-3305762,3307254-3307347,
3308530-3308882,3309140-3309274,3309354-3309392,
3309587-3309652,3309739-3309834,3310291-3310527,
3310602-3310722,3310854-3310889,3313062-3313159,
3313298-3313591,3313842-3313904,3314280-3314438,
3314557-3314655
Length = 745
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 132 AHIFASFNDTFVHVTDLSGRETIARVT 212
+H+++ D V++TDLS RE++ T
Sbjct: 280 SHVYSGGRDQSVYLTDLSNRESVLLCT 306
>06_03_0263 - 18910447-18911217,18911311-18911556
Length = 338
Score = 27.1 bits (57), Expect = 9.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 182 IRPGNYRPCHWWHEGEG*P**SVTLRCYVGGT 277
++ GN RP HWW E V L+C V T
Sbjct: 311 VKMGNIRPKHWWTPTE------VRLKCSVANT 336
>05_03_0175 +
9222749-9222819,9223045-9223116,9223426-9223497,
9223609-9223680,9223765-9223836,9224408-9224482,
9224587-9224658,9224912-9224977,9225051-9225095,
9225220-9225724,9225807-9226005,9226080-9226238,
9226316-9226434,9226556-9226766,9226905-9227136,
9227219-9227369,9227458-9227781
Length = 838
Score = 27.1 bits (57), Expect = 9.8
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 9 ILTALKLKAEPWPRVKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASF 152
+++AL + P V+N V K +V L+G ++ G+A +F F
Sbjct: 432 MISALSVSPNFTPTVRNGVPKRRSKVHTIAGILIGASILGLAALFGIF 479
>02_03_0016 +
13962086-13962326,13962529-13962614,13962652-13962750,
13963022-13963131,13964024-13964083,13964220-13964304
Length = 226
Score = 27.1 bits (57), Expect = 9.8
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 416 DWPH*RCHPRTIRLDP 463
D PH RC+ R +RLDP
Sbjct: 10 DLPHVRCYTRHLRLDP 25
>02_01_0014 - 87215-87280,87358-87495,87593-87721,87801-87869,
87962-88042,88133-88237,88338-88568,88665-90197,
90660-90752,91477-92887,93184-93305,93479-93718,
94521-94682,94770-94937,95025-95141,95266-95376,
95919-96506
Length = 1787
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 160 HSFMLLIYPAGKLSPVSLVA*R*RLTVMKRHPT 258
H+F + A +L P L A +LT++++HP+
Sbjct: 1691 HAFCQFVTGAPRLPPGGLAALNPKLTIVRKHPS 1723
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,193,835
Number of Sequences: 37544
Number of extensions: 326227
Number of successful extensions: 829
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1222086348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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