Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_D05
         (689 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    24   1.6  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   4.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   6.3  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   6.3  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.4  

>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = -2

Query: 619 IYSCGVTFILSIYESVCFKFVFSYSSEGFECFWFP*SQ 506
           +YS G  F+L I+ +   +   S     + C W+  S+
Sbjct: 164 LYSLGQVFMLCIFGNRLIEESSSVMEAAYSCHWYDGSE 201


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -2

Query: 436 NIVLLTSSRYSDIPKTFHVFFLKLSCFGCINQ 341
           N   L   RY  +P + +V   K+   GC+ Q
Sbjct: 78  NKTFLAVIRYDGVPSSLNVISEKIGNGGCLLQ 109


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 353 LHKPVLGEHFELQSNNNFV 297
           L + +LG +F+ Q+ NN +
Sbjct: 386 LARDILGYNFDFQNKNNLI 404


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 353 LHKPVLGEHFELQSNNNFV 297
           L + +LG +F+ Q+ NN +
Sbjct: 386 LARDILGYNFDFQNKNNLI 404


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 422 EQHNITLFSLREGLDRANIMLDRKSL 499
           E HN + FS+   L+R N++    SL
Sbjct: 469 ELHNSSPFSIYSFLERLNLIFMSSSL 494


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 422 EQHNITLFSLREGLDRANIMLDRKSL 499
           E HN + FS+   L+R N++    SL
Sbjct: 507 ELHNSSPFSIYSFLERLNLIFMSSSL 532


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,154
Number of Sequences: 438
Number of extensions: 4033
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)