Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_D03
         (719 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.95 
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   3.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   5.1  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 24.6 bits (51), Expect = 0.95
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 71  FSREFRSPGLVDTSRLDFFNGIDW 142
           F  E  +PG V+ S  +F  GI+W
Sbjct: 33  FGAEANTPGWVEESFTNFDKGINW 56


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 231 LLKLNAPEWPLITVGSIAAFL 293
           +LK N PE+PL  +  I  FL
Sbjct: 195 MLKENMPEFPLYQLSCILFFL 215


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 431 YIHVSTKYNLYKRWL 475
           YI  ST+Y  +K WL
Sbjct: 108 YIDKSTEYRFFKPWL 122


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 554 EYGRRDLCEIER 589
           E G RDLC+++R
Sbjct: 303 EIGSRDLCDVQR 314


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,087
Number of Sequences: 438
Number of extensions: 3552
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22292145
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)