Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_C20
         (730 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    25   1.8  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   3.2  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   3.2  
U50474-1|AAA93476.1|   62|Anopheles gambiae protein ( Anopheles ...    24   5.5  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.3  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.3  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    23   9.7  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   9.7  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = -3

Query: 515 MFSTKNLALGPFGILDIHIYKSLIFLPSNKMHLLQFFIS-LISLTTYKFLLLSIL 354
           +F T NL +   GI  + +   + +LPS+    +   IS L+SLT +  LL  I+
Sbjct: 240 LFYTVNLIIPCVGISFLSVL--VFYLPSDSGEKISLCISILLSLTVFFLLLAEII 292


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = -3

Query: 515 MFSTKNLALGPFGILDIHIYKSLIFLPSNKMHLLQFFISLISLTTYKFLLLS 360
           +F T NL +   GI  + I   + +LPS+    +   IS++   T  FLLL+
Sbjct: 240 LFYTVNLIIPCMGISFLTIL--VFYLPSDSGEKVSLSISILLSLTVFFLLLA 289


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 621  ERITGTNFWCT*LSSKKSTIFR 686
            ERI G  F CT  SSK ST  R
Sbjct: 1332 ERIAGETFECTSTSSKFSTSSR 1353


>U50474-1|AAA93476.1|   62|Anopheles gambiae protein ( Anopheles
           gambiae putativetrypsin-like enzyme precursor, mRNA,
           partial cds. ).
          Length = 62

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 157 RITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQRVLV 270
           R+  P+T    +   P+R+        V+WI+R RV +
Sbjct: 14  RLNSPITFTARIQ--PIRLPGPLGYPPVRWIHRYRVRI 49


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 12/59 (20%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 199 PPVRMSSDPAPKQVKWINRQRVLVFAMRGINHRHRHLMEDIKKL-MPHHKTESKMERSK 372
           PP+ +      +Q        +++ +  G +H H  L+E+   L M HH+ + + ++ +
Sbjct: 690 PPIELHELQQQQQQNGGPTATIMMISTAGPHHPHDLLIEENNMLNMTHHQHQHQQQQQQ 748


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -2

Query: 504 QKFSTWSIWYIRYPHIQIPHLSSFK*NAFVAVFHL 400
           + + TW  W++ +   +I     +K N     FHL
Sbjct: 275 RNYGTWISWWVEFAKPKIKSFFRWKTNERFRSFHL 309


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 307 LMEDIKKLMPHHKTESKMERSKNL 378
           L ++++ ++PHH +    E  +NL
Sbjct: 350 LRKELRSILPHHDSPLTPENMRNL 373


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = +1

Query: 169 PVTKDENVPLPPVRMSSDPAPKQV 240
           P+    N PLPP  M   P P  V
Sbjct: 100 PLLMGPNGPLPPPMMGMRPPPMMV 123


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,600
Number of Sequences: 2352
Number of extensions: 16134
Number of successful extensions: 20
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)