Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_C20
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC036741-1|AAH36741.1| 353|Homo sapiens brix domain containing ... 268 2e-71
BC001546-1|AAH01546.2| 353|Homo sapiens brix domain containing ... 268 2e-71
AY364244-1|AAQ76803.1| 353|Homo sapiens BRIX protein. 268 2e-71
AF347667-1|AAL83818.1| 354|Homo sapiens BRIX protein. 266 6e-71
BC006014-1|AAH06014.1| 335|Homo sapiens Unknown (protein for IM... 263 4e-70
AY364243-1|AAQ76802.1| 129|Homo sapiens BRIX protein. 117 4e-26
AK001962-1|BAA92003.1| 129|Homo sapiens protein ( Homo sapiens ... 117 4e-26
BX538061-1|CAD97992.1| 311|Homo sapiens hypothetical protein pr... 33 1.0
BC034033-1|AAH34033.1| 409|Homo sapiens chromosome 9 open readi... 33 1.0
AL158825-4|CAI12577.1| 409|Homo sapiens chromosome 9 open readi... 33 1.0
AK098661-1|BAC05369.1| 277|Homo sapiens protein ( Homo sapiens ... 33 1.0
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 31 5.6
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 31 5.6
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 31 5.6
>BC036741-1|AAH36741.1| 353|Homo sapiens brix domain containing 2
protein.
Length = 353
Score = 268 bits (656), Expect = 2e-71
Identities = 121/205 (59%), Positives = 150/205 (73%), Gaps = 3/205 (1%)
Frame = +1
Query: 124 VKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQV---KWINRQRVLVFAMRGINH 294
V+ KKP + + EP K D P V KW N++R+L+F+ RGIN
Sbjct: 14 VQAKKPKR-NEIDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIFSSRGINF 72
Query: 295 RHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISN 474
R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNKCI FE +K +DLYMW+SN
Sbjct: 73 RTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSN 132
Query: 475 IPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIFGVP 654
P+GPSAKFLV+NI+T+ ELKMTGNCL+GSRPLLSFDP F + PHY LLKELL+QIF P
Sbjct: 133 SPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELLIQIFSTP 192
Query: 655 NYHPKSQPFFDHVYTFMVLXNRIWF 729
YHPKSQPF DHV+TF +L NRIWF
Sbjct: 193 RYHPKSQPFVDHVFTFTILDNRIWF 217
>BC001546-1|AAH01546.2| 353|Homo sapiens brix domain containing 2
protein.
Length = 353
Score = 268 bits (656), Expect = 2e-71
Identities = 121/205 (59%), Positives = 150/205 (73%), Gaps = 3/205 (1%)
Frame = +1
Query: 124 VKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQV---KWINRQRVLVFAMRGINH 294
V+ KKP + + EP K D P V KW N++R+L+F+ RGIN
Sbjct: 14 VQAKKPKR-NEIDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIFSSRGINF 72
Query: 295 RHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISN 474
R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNKCI FE +K +DLYMW+SN
Sbjct: 73 RTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSN 132
Query: 475 IPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIFGVP 654
P+GPSAKFLV+NI+T+ ELKMTGNCL+GSRPLLSFDP F + PHY LLKELL+QIF P
Sbjct: 133 SPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELLIQIFSTP 192
Query: 655 NYHPKSQPFFDHVYTFMVLXNRIWF 729
YHPKSQPF DHV+TF +L NRIWF
Sbjct: 193 RYHPKSQPFVDHVFTFTILDNRIWF 217
>AY364244-1|AAQ76803.1| 353|Homo sapiens BRIX protein.
Length = 353
Score = 268 bits (656), Expect = 2e-71
Identities = 121/205 (59%), Positives = 150/205 (73%), Gaps = 3/205 (1%)
Frame = +1
Query: 124 VKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQV---KWINRQRVLVFAMRGINH 294
V+ KKP + + EP K D P V KW N++R+L+F+ RGIN
Sbjct: 14 VQAKKPKR-NEIDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIFSSRGINF 72
Query: 295 RHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISN 474
R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNKCI FE +K +DLYMW+SN
Sbjct: 73 RTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSN 132
Query: 475 IPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIFGVP 654
P+GPSAKFLV+NI+T+ ELKMTGNCL+GSRPLLSFDP F + PHY LLKELL+QIF P
Sbjct: 133 SPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELLIQIFSTP 192
Query: 655 NYHPKSQPFFDHVYTFMVLXNRIWF 729
YHPKSQPF DHV+TF +L NRIWF
Sbjct: 193 RYHPKSQPFVDHVFTFTILDNRIWF 217
>AF347667-1|AAL83818.1| 354|Homo sapiens BRIX protein.
Length = 354
Score = 266 bits (652), Expect = 6e-71
Identities = 111/163 (68%), Positives = 137/163 (84%)
Frame = +1
Query: 241 KWINRQRVLVFAMRGINHRHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNK 420
KW N++R+L+F+ RGIN R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNK
Sbjct: 55 KWKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNK 114
Query: 421 CILFEGRKMRDLYMWISNIPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTK 600
CI FE +K +DLYMW+SN P+GPSAKFLV+NI+T+ ELKMTGNCL+GSRPLLSFDP F +
Sbjct: 115 CIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDE 174
Query: 601 DPHYCLLKELLVQIFGVPNYHPKSQPFFDHVYTFMVLXNRIWF 729
PHY LLKELL+QIF P YHPKSQPF DHV+TF +L NRIWF
Sbjct: 175 LPHYALLKELLIQIFSTPRYHPKSQPFVDHVFTFTILDNRIWF 217
>BC006014-1|AAH06014.1| 335|Homo sapiens Unknown (protein for
IMAGE:3683425) protein.
Length = 335
Score = 263 bits (645), Expect = 4e-70
Identities = 120/205 (58%), Positives = 149/205 (72%), Gaps = 3/205 (1%)
Frame = +1
Query: 124 VKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQV---KWINRQRVLVFAMRGINH 294
V+ KKP + + EP K D P V KW N++R+L+F+ RGIN
Sbjct: 14 VQAKKPKR-NEIDAEPPAKRHATAEEVKEEERDRIPGPVCKGKWKNKERILIFSSRGINF 72
Query: 295 RHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMWISN 474
R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNKCI FE +K +DLYMW+SN
Sbjct: 73 RTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSN 132
Query: 475 IPNGPSAKFLVENIYTMGELKMTGNCLRGSRPLLSFDPQFTKDPHYCLLKELLVQIFGVP 654
P+GPSAKFLV+NI+T+ ELKMTGNCL+GSRPLLSFDP F + PHY LLKELL+QIF P
Sbjct: 133 SPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELLIQIFSTP 192
Query: 655 NYHPKSQPFFDHVYTFMVLXNRIWF 729
YHPKSQPF D V+TF +L NRIWF
Sbjct: 193 RYHPKSQPFVDLVFTFTILDNRIWF 217
>AY364243-1|AAQ76802.1| 129|Homo sapiens BRIX protein.
Length = 129
Score = 117 bits (282), Expect = 4e-26
Identities = 55/117 (47%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Frame = +1
Query: 124 VKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQV---KWINRQRVLVFAMRGINH 294
V+ KKP + + EP K D P V KW N++R+L+F+ RGIN
Sbjct: 14 VQAKKPKR-NEIDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIFSSRGINF 72
Query: 295 RHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMW 465
R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNKCI FE +K +DLYMW
Sbjct: 73 RTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMW 129
>AK001962-1|BAA92003.1| 129|Homo sapiens protein ( Homo sapiens
cDNA FLJ11100 fis, clone PLACE1005550. ).
Length = 129
Score = 117 bits (282), Expect = 4e-26
Identities = 55/117 (47%), Positives = 74/117 (63%), Gaps = 3/117 (2%)
Frame = +1
Query: 124 VKVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQV---KWINRQRVLVFAMRGINH 294
V+ KKP + + EP K D P V KW N++R+L+F+ RGIN
Sbjct: 14 VQAKKPKR-NEIDAEPPAKRHATAEEVEEEERDRIPGPVCKGKWKNKERILIFSSRGINF 72
Query: 295 RHRHLMEDIKKLMPHHKTESKMERSKNLYVVNEISEMKNCNKCILFEGRKMRDLYMW 465
R RHLM+D++ LMPH K ++KM+R L+V+NE+ EMKNCNKCI FE +K +DLYMW
Sbjct: 73 RTRHLMQDLRMLMPHSKADTKMDRKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMW 129
>BX538061-1|CAD97992.1| 311|Homo sapiens hypothetical protein
protein.
Length = 311
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 244 WINRQRVLVFAMRGINHRHRHLM-EDIKKLMPHH--KTESKMERSKNLYVVNEISEMKNC 414
WIN +L N L EDIK ++ + K E + E + Y VN++S MK
Sbjct: 240 WINLGPLLYHFENLANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDLSMMKYY 299
Query: 415 NKCILFEGRK 444
+C+LF RK
Sbjct: 300 YECVLFVVRK 309
>BC034033-1|AAH34033.1| 409|Homo sapiens chromosome 9 open reading
frame 41 protein.
Length = 409
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 244 WINRQRVLVFAMRGINHRHRHLM-EDIKKLMPHH--KTESKMERSKNLYVVNEISEMKNC 414
WIN +L N L EDIK ++ + K E + E + Y VN++S MK
Sbjct: 338 WINLGPLLYHFENLANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDLSMMKYY 397
Query: 415 NKCILFEGRK 444
+C+LF RK
Sbjct: 398 YECVLFVVRK 407
>AL158825-4|CAI12577.1| 409|Homo sapiens chromosome 9 open reading
frame 41 protein.
Length = 409
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 244 WINRQRVLVFAMRGINHRHRHLM-EDIKKLMPHH--KTESKMERSKNLYVVNEISEMKNC 414
WIN +L N L EDIK ++ + K E + E + Y VN++S MK
Sbjct: 338 WINLGPLLYHFENLANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDLSMMKYY 397
Query: 415 NKCILFEGRK 444
+C+LF RK
Sbjct: 398 YECVLFVVRK 407
>AK098661-1|BAC05369.1| 277|Homo sapiens protein ( Homo sapiens
cDNA FLJ25795 fis, clone TST07031. ).
Length = 277
Score = 33.1 bits (72), Expect = 1.0
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +1
Query: 244 WINRQRVLVFAMRGINHRHRHLM-EDIKKLMPHH--KTESKMERSKNLYVVNEISEMKNC 414
WIN +L N L EDIK ++ + K E + E + Y VN++S MK
Sbjct: 206 WINLGPLLYHFENLANELSIELSYEDIKNVVLQYGFKVEVEKESVLSTYTVNDLSMMKYY 265
Query: 415 NKCILFEGRK 444
+C+LF RK
Sbjct: 266 YECVLFVVRK 275
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 30.7 bits (66), Expect = 5.6
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 127 KVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQ 258
++K+ K++++I EP+ + PLP DP + +K I +
Sbjct: 441 ELKEKEKLEEKIKEPIKEPSEEPLPMETEEEDPKEEPIKEIKEE 484
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 30.7 bits (66), Expect = 5.6
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 127 KVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQ 258
++K+ K++++I EP+ + PLP DP + +K I +
Sbjct: 462 ELKEKEKLEEKIKEPIKEPSEEPLPMETEEEDPKEEPIKEIKEE 505
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 30.7 bits (66), Expect = 5.6
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +1
Query: 127 KVKKPSKVKQRITEPVTKDENVPLPPVRMSSDPAPKQVKWINRQ 258
++K+ K++++I EP+ + PLP DP + +K I +
Sbjct: 445 ELKEKEKLEEKIKEPIKEPSEEPLPMETEEEDPKEEPIKEIKEE 488
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,779,499
Number of Sequences: 237096
Number of extensions: 2285340
Number of successful extensions: 7922
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 7756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7922
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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