Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_C20
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 24 1.3
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 24 1.3
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 2.9
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 22 5.2
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 22 5.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 22 6.8
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 22 6.8
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 6.8
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 9.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 21 9.0
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.0
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 9.0
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 515 MFSTKNLALGPFGILDIHIYKSLIFLPSNKMHLLQFFISLISLTTYKFLLLS 360
+F T NL + GI + + + +LPS+ + IS++ T FLLL+
Sbjct: 241 LFYTVNLIIPCMGISFLTVL--VFYLPSDSGEKVSLSISILLSLTVFFLLLA 290
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 24.2 bits (50), Expect = 1.3
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 515 MFSTKNLALGPFGILDIHIYKSLIFLPSNKMHLLQFFISLISLTTYKFLLLS 360
+F T NL + GI + + + +LPS+ + IS++ T FLLL+
Sbjct: 237 LFYTVNLIIPCVGISFLSVL--VFYLPSDSGEKVSLSISILLSLTVFFLLLA 286
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 556 RGSRPLLSFDPQFTKDPHYCLLKE 627
R RP +F+P+ T HY KE
Sbjct: 158 RYKRPRTTFEPRATDSRHYDRYKE 181
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -2
Query: 546 ASHFQFPHSINVFHQKFSTWS 484
A H + P++ FH K W+
Sbjct: 788 AGHVRLPYTFEQFHNKELLWT 808
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -2
Query: 546 ASHFQFPHSINVFHQKFSTWS 484
A H + P++ FH K W+
Sbjct: 826 AGHVRLPYTFEQFHNKELLWT 846
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.8 bits (44), Expect = 6.8
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 243 MDKQTEGTRLCDERYQSSSQAFNG 314
+ K T LC RYQ A+NG
Sbjct: 1419 VQKYTLENLLCGSRYQIYVTAYNG 1442
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.8 bits (44), Expect = 6.8
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 463 WISNIPNGPSAKFLVEN 513
W++N+PNG ++ N
Sbjct: 336 WVANVPNGSVTNWVSGN 352
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 6.8
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = +1
Query: 229 PKQVKWINRQR 261
P+ +KW NR+R
Sbjct: 475 PRYIKWTNRER 485
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.4 bits (43), Expect = 9.0
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +2
Query: 626 NYWYKFLVYLIIIQKVNHFSI 688
N W+ L + I+ Q H+S+
Sbjct: 4 NIWWLILYFSIVCQAKAHYSL 24
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 301 RHLMEDIKKLMPHHKTESKME 363
R ++EDIK + H T++ M+
Sbjct: 215 RIILEDIKHINTRHNTKNGMK 235
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +1
Query: 658 YHPKSQPFFDHVYTFMV 708
YHP+ PF +Y ++
Sbjct: 347 YHPEDLPFIKDIYETVI 363
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +1
Query: 658 YHPKSQPFFDHVYTFMV 708
YHP+ PF +Y ++
Sbjct: 53 YHPEDLPFIKDIYETVI 69
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,253
Number of Sequences: 438
Number of extensions: 4382
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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