Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_C19
(784 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 312 2e-85
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 307 7e-84
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 288 3e-78
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 288 3e-78
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 288 3e-78
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 5.0
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 5.0
AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical ... 29 5.0
AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical... 28 6.6
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 6.6
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 28 8.7
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 28 8.7
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 8.7
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 312 bits (766), Expect = 2e-85
Identities = 148/213 (69%), Positives = 172/213 (80%)
Frame = +1
Query: 145 IVAPAKGLLAADXSTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHE 324
IV P KG+LAAD STG+M KRL IG+ENTEENRR+YRQLLF++ A L++ ISGVI+FHE
Sbjct: 23 IVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFTAGADLNKYISGVIMFHE 82
Query: 325 TLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDG 504
T YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+ E TTQGLDDL RCAQYKKDG
Sbjct: 83 TFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDG 142
Query: 505 CHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLXRA 684
FAKWRCV KI TPS A++E A+ LARYASICQ +VPIVEPE+LPDGEH L R
Sbjct: 143 AQFAKWRCVHKISSTTPSVTALKEIASNLARYASICQQNGLVPIVEPEILPDGEHCLARG 202
Query: 685 XKVTEVVLAAVYKALNDHHVYLEGTLLKPXMVT 783
K+TE VL+ VY ALN+HHV+LEGTLLKP MVT
Sbjct: 203 QKITETVLSYVYHALNEHHVFLEGTLLKPNMVT 235
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 307 bits (753), Expect = 7e-84
Identities = 147/214 (68%), Positives = 172/214 (80%), Gaps = 1/214 (0%)
Frame = +1
Query: 145 IVAPAKGLLAADXSTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHE 324
IV P KG+LAAD STG+M KRL IG+ENTEENRR+YRQLLF++ A L++ ISGVI+FHE
Sbjct: 23 IVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYRQLLFTAGADLNKYISGVIMFHE 82
Query: 325 TLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDG 504
T YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+ E TTQGLDDL RCAQYKKDG
Sbjct: 83 TFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTIGEGTTQGLDDLNARCAQYKKDG 142
Query: 505 CHFAKWRCVLKIGRNTPSYQAIQENA-NVLARYASICQSQRIVPIVEPEVLPDGEHDLXR 681
FAKWRCV KI TPS A++E A N+ +RYASICQ +VPIVEPE+LPDGEH L R
Sbjct: 143 AQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQQNGLVPIVEPEILPDGEHCLAR 202
Query: 682 AXKVTEVVLAAVYKALNDHHVYLEGTLLKPXMVT 783
K+TE VL+ VY ALN+HHV+LEGTLLKP MVT
Sbjct: 203 GQKITETVLSYVYHALNEHHVFLEGTLLKPNMVT 236
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 288 bits (706), Expect = 3e-78
Identities = 143/213 (67%), Positives = 166/213 (77%)
Frame = +1
Query: 145 IVAPAKGLLAADXSTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHE 324
IV KG+LAAD STGT+GKRL I +EN E NR++YRQLLF++ L+++ISGVIL+ E
Sbjct: 27 IVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN-LNQHISGVILYEE 85
Query: 325 TLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDG 504
T +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGLD LA+R A +KK G
Sbjct: 86 TFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGG 145
Query: 505 CHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLXRA 684
C FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVEPEVL DGEHDL RA
Sbjct: 146 CGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVEPEVLCDGEHDLARA 205
Query: 685 XKVTEVVLAAVYKALNDHHVYLEGTLLKPXMVT 783
KVTE VLA VYKAL DHHVYLEGTLLKP MVT
Sbjct: 206 QKVTEQVLAFVYKALADHHVYLEGTLLKPNMVT 238
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 288 bits (706), Expect = 3e-78
Identities = 143/213 (67%), Positives = 166/213 (77%)
Frame = +1
Query: 145 IVAPAKGLLAADXSTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHE 324
IV KG+LAAD STGT+GKRL I +EN E NR++YRQLLF++ L+++ISGVIL+ E
Sbjct: 27 IVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN-LNQHISGVILYEE 85
Query: 325 TLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDG 504
T +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGLD LA+R A +KK G
Sbjct: 86 TFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGG 145
Query: 505 CHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLXRA 684
C FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVEPEVL DGEHDL RA
Sbjct: 146 CGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVEPEVLCDGEHDLARA 205
Query: 685 XKVTEVVLAAVYKALNDHHVYLEGTLLKPXMVT 783
KVTE VLA VYKAL DHHVYLEGTLLKP MVT
Sbjct: 206 QKVTEQVLAFVYKALADHHVYLEGTLLKPNMVT 238
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 288 bits (706), Expect = 3e-78
Identities = 143/213 (67%), Positives = 166/213 (77%)
Frame = +1
Query: 145 IVAPAKGLLAADXSTGTMGKRLQDIGVENTEENRRRYRQLLFSSDAVLSENISGVILFHE 324
IV KG+LAAD STGT+GKRL I +EN E NR++YRQLLF++ L+++ISGVIL+ E
Sbjct: 27 IVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN-LNQHISGVILYEE 85
Query: 325 TLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDG 504
T +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGLD LA+R A +KK G
Sbjct: 86 TFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGLDKLAERAAAFKKGG 145
Query: 505 CHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDLXRA 684
C FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVEPEVL DGEHDL RA
Sbjct: 146 CGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVEPEVLCDGEHDLARA 205
Query: 685 XKVTEVVLAAVYKALNDHHVYLEGTLLKPXMVT 783
KVTE VLA VYKAL DHHVYLEGTLLKP MVT
Sbjct: 206 QKVTEQVLAFVYKALADHHVYLEGTLLKPNMVT 238
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 28.7 bits (61), Expect = 5.0
Identities = 47/201 (23%), Positives = 75/201 (37%), Gaps = 9/201 (4%)
Frame = +3
Query: 99 PTPVAAGGAQAAR----SSNCSSRKGSPRR*RIHRYNGKAFAGH-----RRGEHRGEPSS 251
PTP+ G Q + S +R+ S ++ R N A AG +G R + ++
Sbjct: 91 PTPIPEGSTQPQQRQQQQSQPQARQMSTQQAANLRKNAAA-AGTPPKQAMQGASREQGNA 149
Query: 252 LSPTPIQL*RCALREHLWCDPVPRDPLPEG*RWNASGLPAGEEGHHPRHQGRQGCRPAVR 431
PT Q+ + + + VPR P P P+ G HP Q Q R
Sbjct: 150 HQPTAGQIPQSSNQPAQQTHNVPRMPQP----LQQVPHPSPVRGSHPAAQQVQNAPQ--R 203
Query: 432 IGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPLVPSYPGKRQCSRPLRFHL 611
I + + P P ++ V+ + Q+ +A R + P R +P+ H
Sbjct: 204 IPQHVPMPQGVAPHQVIQQVRAPNIGASQMVQQAPSRGH---TGAAPASRMAQQPVPLHQ 260
Query: 612 SEPTHRADCRARSLT*WRARP 674
H+A + T R RP
Sbjct: 261 GVAPHQAAPQTIQQTPARGRP 281
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 28.7 bits (61), Expect = 5.0
Identities = 47/201 (23%), Positives = 75/201 (37%), Gaps = 9/201 (4%)
Frame = +3
Query: 99 PTPVAAGGAQAAR----SSNCSSRKGSPRR*RIHRYNGKAFAGH-----RRGEHRGEPSS 251
PTP+ G Q + S +R+ S ++ R N A AG +G R + ++
Sbjct: 91 PTPIPEGSTQPQQRQQQQSQPQARQMSTQQAANLRKNAAA-AGTPPKQAMQGASREQGNA 149
Query: 252 LSPTPIQL*RCALREHLWCDPVPRDPLPEG*RWNASGLPAGEEGHHPRHQGRQGCRPAVR 431
PT Q+ + + + VPR P P P+ G HP Q Q R
Sbjct: 150 HQPTAGQIPQSSNQPAQQTHNVPRMPQP----LQQVPHPSPVRGSHPAAQQVQNAPQ--R 203
Query: 432 IGRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPLVPSYPGKRQCSRPLRFHL 611
I + + P P ++ V+ + Q+ +A R + P R +P+ H
Sbjct: 204 IPQHVPMPQGVAPHQVIQQVRAPNIGASQMVQQAPSRGH---TGAAPASRMAQQPVPLHQ 260
Query: 612 SEPTHRADCRARSLT*WRARP 674
H+A + T R RP
Sbjct: 261 GVAPHQAAPQTIQQTPARGRP 281
>AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical
protein R02F11.2 protein.
Length = 721
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -1
Query: 544 GRSSARNATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 437
GR N G RPS +G AG RP GWC+++
Sbjct: 253 GRPRPGNGGGGGGVRPSNSGCDAGWRRFNRPSGGWCVKV 291
>AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical
protein Y51H4A.16 protein.
Length = 136
Score = 28.3 bits (60), Expect = 6.6
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +1
Query: 397 IKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQE 576
++V + V L + E T + L LAQ+ ++ +D W+C+ G +T + ++I+E
Sbjct: 22 VRVVERAVALHKNSKEKTNEKL--LAQKSGKWARDAESRNTWKCIRAPGAHTHTGESIKE 79
Query: 577 N 579
+
Sbjct: 80 S 80
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 346 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 450
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -1
Query: 526 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 437
N G RP+ G AG RP+ GWC+R+
Sbjct: 48 NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 226 ENTEENRRRYRQLLFSSDA 282
E TEEN +RY QL+ SD+
Sbjct: 798 EQTEENEKRYEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 226 ENTEENRRRYRQLLFSSDA 282
E TEEN +RY QL+ SD+
Sbjct: 784 EQTEENEKRYEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 226 ENTEENRRRYRQLLFSSDA 282
E TEEN +RY QL+ SD+
Sbjct: 784 EQTEENEKRYEQLVSESDS 802
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -3
Query: 500 SFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSA 339
S L +Q +S P VV SSS +S T ST+ P +S + PS++
Sbjct: 450 STLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTS 503
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,726,973
Number of Sequences: 27780
Number of extensions: 401978
Number of successful extensions: 1398
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1393
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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