Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_C18
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28739-15|AAK68188.1| 537|Caenorhabditis elegans Hypothetical p... 189 2e-48
U28739-14|AAM54207.1| 535|Caenorhabditis elegans Hypothetical p... 189 2e-48
AF016674-3|AAB66128.1| 558|Caenorhabditis elegans Hypothetical ... 73 2e-13
Z75711-8|CAJ43907.1| 118|Caenorhabditis elegans Hypothetical pr... 33 0.18
U97403-9|AAB52469.1| 389|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL132847-2|CAB63372.1| 343|Caenorhabditis elegans Hypothetical ... 28 6.8
U80028-8|AAN73866.1| 378|Caenorhabditis elegans Serpentine rece... 28 9.0
>U28739-15|AAK68188.1| 537|Caenorhabditis elegans Hypothetical
protein C17G10.9a protein.
Length = 537
Score = 189 bits (460), Expect = 2e-48
Identities = 95/198 (47%), Positives = 129/198 (65%), Gaps = 5/198 (2%)
Frame = +2
Query: 224 MPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKYFENTPWPDEDEVSPIVDNDN- 400
+P+ V +LVYF M++E EIL LY+ FP LTE++F + WPDE+ V I+ N
Sbjct: 32 VPNEVADYLVYFSRMVDEQNVPEILTLYDQAFPDLTERFFRDRMWPDENVVERIIGPGNK 91
Query: 401 VFMILYKELYYRDIYARVPGGPKPEQRFHSFYNYCDLFNYIL-SVTPVPLELPDQWLWEL 577
+F+ILYKELYYR +YAR GP R+ SF NY +LF+ +L S P+PL LP+ WLW++
Sbjct: 92 LFIILYKELYYRQLYARNTRGPLLVHRYESFMNYQELFSELLSSKDPIPLSLPNVWLWDI 151
Query: 578 IDEFVYQFQSFAQYRSRTTKLSPAEIEAL-NTE--NKAWNVLCILNVLHSLVXKSNIKRQ 748
IDEFVYQFQ+F Y++ K + E+E L N E AWN+ +LN+L+SL+ KS I Q
Sbjct: 152 IDEFVYQFQAFCLYKANPGKRNADEVEDLINIEENQNAWNIYPVLNILYSLLSKSQIVEQ 211
Query: 749 LEVYASGGDPDXVAGEFG 802
L+ +PD VA EFG
Sbjct: 212 LKALKEKRNPDSVADEFG 229
>U28739-14|AAM54207.1| 535|Caenorhabditis elegans Hypothetical
protein C17G10.9b protein.
Length = 535
Score = 189 bits (460), Expect = 2e-48
Identities = 95/198 (47%), Positives = 129/198 (65%), Gaps = 5/198 (2%)
Frame = +2
Query: 224 MPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKYFENTPWPDEDEVSPIVDNDN- 400
+P+ V +LVYF M++E EIL LY+ FP LTE++F + WPDE+ V I+ N
Sbjct: 30 VPNEVADYLVYFSRMVDEQNVPEILTLYDQAFPDLTERFFRDRMWPDENVVERIIGPGNK 89
Query: 401 VFMILYKELYYRDIYARVPGGPKPEQRFHSFYNYCDLFNYIL-SVTPVPLELPDQWLWEL 577
+F+ILYKELYYR +YAR GP R+ SF NY +LF+ +L S P+PL LP+ WLW++
Sbjct: 90 LFIILYKELYYRQLYARNTRGPLLVHRYESFMNYQELFSELLSSKDPIPLSLPNVWLWDI 149
Query: 578 IDEFVYQFQSFAQYRSRTTKLSPAEIEAL-NTE--NKAWNVLCILNVLHSLVXKSNIKRQ 748
IDEFVYQFQ+F Y++ K + E+E L N E AWN+ +LN+L+SL+ KS I Q
Sbjct: 150 IDEFVYQFQAFCLYKANPGKRNADEVEDLINIEENQNAWNIYPVLNILYSLLSKSQIVEQ 209
Query: 749 LEVYASGGDPDXVAGEFG 802
L+ +PD VA EFG
Sbjct: 210 LKALKEKRNPDSVADEFG 227
>AF016674-3|AAB66128.1| 558|Caenorhabditis elegans Hypothetical
protein C03H5.5 protein.
Length = 558
Score = 73.3 bits (172), Expect = 2e-13
Identities = 44/130 (33%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +2
Query: 221 KMPDMVKKFLVYFRNMINEGVTYEILNLYENTFPTLTEKYFENTPWPDEDEVSPIVDNDN 400
K D+V ++L +F MI E EI N Y + T+ ++ + WPDE V + +N
Sbjct: 93 KATDIVLEYLAHFSKMIAENNLLEIQNCYYDRLETVQKQLPPSFTWPDEITVRKSISPEN 152
Query: 401 V-FMILYKELYYRDIYARVPGGPKPEQRFHSFYNYCDLFNYILSVTPVPLELPDQWLWEL 577
FM+LYKEL YR + A + Q NY +F S+ P L LPD W+ ++
Sbjct: 153 QDFMVLYKELKYRRLNA------EARQNKDMLENYQSIF----SILPGKLNLPDYWILDI 202
Query: 578 IDEFVYQFQS 607
++E+V+Q Q+
Sbjct: 203 MEEYVFQIQT 212
>Z75711-8|CAJ43907.1| 118|Caenorhabditis elegans Hypothetical
protein K02B12.9 protein.
Length = 118
Score = 33.5 bits (73), Expect = 0.18
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 146 YESYGDYEAQSTEHYEPEYDRSSY 217
YESYG Y+ HY+P Y SY
Sbjct: 43 YESYGKYDDHKDSHYQPSYYHDSY 66
>U97403-9|AAB52469.1| 389|Caenorhabditis elegans Hypothetical
protein T10E9.1 protein.
Length = 389
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 98 ILLTTMYSSDDYNEGGYESYGDYEAQSTEHYEPEYDRSSY 217
ILL + +DD +E ++Y DY+ +++P+YD Y
Sbjct: 330 ILLGLPHFADDSSEYD-DNYDDYDNDEDSNFDPDYDYERY 368
>AL132847-2|CAB63372.1| 343|Caenorhabditis elegans Hypothetical
protein Y48G10A.3 protein.
Length = 343
Score = 28.3 bits (60), Expect = 6.8
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 185 HYEPEYDRSSYYKMPDMVKKFLVYFRNMINEGVTYEILNLYENTFP 322
H+ YDR S PD+V+++ V+F+++ N E + Y P
Sbjct: 195 HFGRNYDRCS----PDIVRQYRVFFQHLPNPNSLAEFIESYIQRTP 236
>U80028-8|AAN73866.1| 378|Caenorhabditis elegans Serpentine
receptor, class w protein118 protein.
Length = 378
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 164 SRHRIRNLPHYNRRWNTWLLIESNSIHTL 78
+RH + L Y+RR +TWL++ I TL
Sbjct: 113 NRHLLHLLKDYSRRCSTWLMVFIALIRTL 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,886,878
Number of Sequences: 27780
Number of extensions: 379115
Number of successful extensions: 1117
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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