Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_C13
         (885 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   4.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   7.4  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.7  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 555 FEGTGLIVDKDNSLVLPI 608
           FE TG  +DK  S+++PI
Sbjct: 376 FEETGFTLDKGVSIMVPI 393


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 470 SLISHIIVEVVYDCC 426
           SL  + I+ V++DCC
Sbjct: 239 SLFGYQIILVIFDCC 253


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 16/70 (22%), Positives = 30/70 (42%)
 Frame = -2

Query: 437 YDCCRFLVHLKSTF*SDFSIYVSGRGVTSHKKVSAIVYEFGYGLTVYLSTKLEHGRCEYY 258
           + C R +V  K++F    S     +  T   K+S I  +    L  +++T        + 
Sbjct: 297 FACLRAIVLFKTSFEKPSSSSNQEKTTTESAKISVIQDDAQMRLNKHVTTTYPKQPLRFG 356

Query: 257 EILV*IFSVF 228
           +IL+ + S F
Sbjct: 357 KILLLVSSTF 366


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 589 TAWFCLFYQ 615
           T +FCLFYQ
Sbjct: 93  TVFFCLFYQ 101


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,157
Number of Sequences: 336
Number of extensions: 4090
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24513621
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)