Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_C13
(885 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein glycotr... 90 3e-19
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 29 1.2
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 28 2.0
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.7
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 4.7
SPBC1604.07 |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|c... 27 4.7
SPAC17G8.08c |||human TMEM165 homolog|Schizosaccharomyces pombe|... 27 4.7
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch... 26 6.2
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 6.2
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 26 6.2
SPAC922.05c |||membrane transporter |Schizosaccharomyces pombe|c... 26 6.2
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 26 6.2
SPCC4B3.17 |cbp3||ubiquinol cytochrome-c reductase assembly prot... 26 6.2
SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit S... 26 8.2
>SPCC338.15 |||dolichyl-di-phosphooligosaccharide-protein
glycotransferase subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 437
Score = 90.2 bits (214), Expect = 3e-19
Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 4/251 (1%)
Frame = +3
Query: 144 HSQFFKSLQXRGYGLTFKLADDANLVLSKYGEYLYKNLIVFAPSVLEFGGQVDSEAITKF 323
+S F +SL R + + D + L +YGE LY NLI+ + G +++ +F
Sbjct: 35 YSTFLQSLTDRDFDVKTSYIKDESAKLFEYGERLYDNLILLSSQSKSLGPVFSPKSLLEF 94
Query: 324 IDDXXXXXXXXXXXXXDVYREIASECGFEMDEESAAVIDHFNYDVTDEGDHTRIVVSPKN 503
+ + RE+ + + E + V+DHFN+ EG I++
Sbjct: 95 VQSGGNLFVVAGSQLPEGIRELGRQLDMFLAERQSVVVDHFNH---AEGSDDIILLD--G 149
Query: 504 LIKAPTIVGEQN--TQPLLFEGTGLIVDKDNSLVLPILSADSTAYSYNPK--SQVKEYPH 671
+ + P I+ ++ P+L++G G + N PIL + T+Y YN K ++V + P
Sbjct: 150 ISENPYIISDETRAAGPILYKGIGHYLG-PNPQTQPILRGNPTSYIYNTKTEAEVSKNPW 208
Query: 672 AVGRKTVLIAALQARNNARIVFSGSLFFFSDEAFNSPVTKVHGDKTKSDVSGNKILAIRL 851
A G + L++ LQ+ R+ SGS+ DE + SP ++ S N + A L
Sbjct: 209 AAGTQLFLVSVLQSSTGERVGLSGSIDMLKDE-YLSP-------QSPSFSKSNFLFARDL 260
Query: 852 TEWVFGXRGRL 884
T WVF +G L
Sbjct: 261 TNWVFQRKGVL 271
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.7 bits (61), Expect = 1.2
Identities = 28/133 (21%), Positives = 57/133 (42%)
Frame = -3
Query: 586 SLSTISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSIS 407
S ++ S S++ S +I + + T+ + S S+ +S L S T + +S+
Sbjct: 113 SATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTSATP 172
Query: 406 NPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANTMRFLYKYSPYF 227
+ + SL ++ A+ SS+N ++ +T SST +N+ S
Sbjct: 173 TSSATSSSLSSTAASNSATSSSLASSSLNSTTSATATSSSLSSTAASNSATSSSLASSSL 232
Query: 226 DRTRFASSASLKV 188
+ T A++ S +
Sbjct: 233 NSTTSATATSSSI 245
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = -3
Query: 817 SDFVLSPCTFVTGELKASSEKKNNDPLKTI 728
+DF+L C + +L SS NN+P++++
Sbjct: 1123 TDFLLQECDKIASQLYLSSRMVNNEPVESL 1152
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 2.7
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Frame = -3
Query: 583 LSTISPVPSNSRGCVFCSPTIVGALIRF--LGDTTMRVWSPSSVTS*LKWSMTAADSSSI 410
LS+ S V S+S S T+ + + + T+ S SS S S TA+ SSS
Sbjct: 210 LSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSS 269
Query: 409 SNPHSEAISLYTSPAAALPAI------RRFPPSSMNLVMASLSTCPPNSSTEGANTM--R 254
S+ S + S +SP + I P S+ + + +S S+ SST +++M
Sbjct: 270 SSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSS 329
Query: 253 FLYKYSPYFDRTRFASSAS 197
+ SP + +SS+S
Sbjct: 330 SSFSSSPTSSSSTISSSSS 348
Score = 26.2 bits (55), Expect = 6.2
Identities = 26/109 (23%), Positives = 51/109 (46%)
Frame = -3
Query: 586 SLSTISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSIS 407
S S+ S P+++ + S + + L ++M S SS S S ++ SSS S
Sbjct: 292 SSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSM---SSSSSFSSSPTSSSSTISSSSS 348
Query: 406 NPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANT 260
+P S + S TS + + + SS + ++L++ +SS +++
Sbjct: 349 SPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSSSRPASSS 397
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -3
Query: 358 LPAIRRFPPSSMNLVMASLSTCPPNSST 275
+P++ + PPSS+ A ST PP+ S+
Sbjct: 1498 IPSVAQQPPSSVAPATAPSSTLPPSQSS 1525
>SPBC1604.07 |atp4||F0-ATPase subunit|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Frame = -3
Query: 856 SVRRIA--RILLPDTSDFVLSPCTF-VTGELKASSEKKNNDPLKTIRALFLACRAAISTV 686
SV+R A R++LP T F L+P TF T + ++K + + ++ + L ++ + TV
Sbjct: 13 SVQRTAWQRLVLPSTRKFSLTPTTFDKTPSGRIPPDQKAANIISSVPSTSLLTKSGVLTV 72
>SPAC17G8.08c |||human TMEM165 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 287
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 675 VGRKTVLIAALQARNNARI-VFSGS 746
+G KT ++AAL A N+R+ VF+GS
Sbjct: 62 IGDKTFIVAALLAFENSRLTVFAGS 86
>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 463
Score = 26.2 bits (55), Expect = 6.2
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Frame = -3
Query: 616 ADRIGKTKLLSLSTISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS-*LKW 440
A + T+ +++T + V + + T G+ I G +T+ PS+VTS K
Sbjct: 199 ASTVTSTEATTVTTTTAVTVTATETYTVTATNGGSTITSTGASTVTSTQPSTVTSTQRKN 258
Query: 439 SMTAADSSSISNPHSEAISL--YTSPAAALPAI 347
+ T +++ P A S+ YT+ +P I
Sbjct: 259 TATTTKTTTYVGPSPSASSVVAYTTKCIVVPVI 291
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1334
Score = 26.2 bits (55), Expect = 6.2
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 471 DHTRIVVSPKNLIKAPTIVGEQNTQPLLFEGTGLIVDKDNSLVLPILSADSTA---YSYN 641
DH ++V PK + K + Q PLL L + DN L +P S A + N
Sbjct: 872 DHALLIVKPKTINKRELLKVFQRPIPLLL--LQLFLVDDNGLRIPYSSKQQLAAVSKAAN 929
Query: 642 PKSQVKEYPHAV 677
K + YP ++
Sbjct: 930 GKPPSRFYPFSL 941
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 6.2
Identities = 24/107 (22%), Positives = 46/107 (42%)
Frame = -3
Query: 580 STISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSISNP 401
S++ P G + C + ++ S SSV+S SSS S+P
Sbjct: 92 SSLCTTPCPGYGSLMCGGDLYWSVYLTGNGVLQTTVSSSSVSS-------TTSSSSSSSP 144
Query: 400 HSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANT 260
S + + TSP+++ + SS + +S S+ +SS+ +++
Sbjct: 145 SSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 191
>SPAC922.05c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 504
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 114 LXXNLNXKATHSQFFKSLQXRGYGLTFKLADDANLVLSKY 233
L + N A + F+KSLQ G +T+++ D N+ Y
Sbjct: 414 LSNDTNKLAVYMGFYKSLQSAGAAITYRM-DTLNIPYMNY 452
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 26.2 bits (55), Expect = 6.2
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Frame = -3
Query: 598 TKLLSLSTISPVPSNSRGCVFCSPTIVGALIRFLG-DTTMRVWSPSSVTS*LKWSMTAAD 422
T LL S+I S+S + PT+ + L TT VW T L T
Sbjct: 429 TSLLRRSSIDGSASSSSASL-AVPTVSSSTTGSLHYKTTTTVWVTEVFTRYLGDDSTPVT 487
Query: 421 SSSISNPHSEAISLYTSPAAAL-PAIRRFPPSSMNLVMASLSTCPPNSSTEGANTMRFLY 245
SSSI + +EA ++A+ + S + V AS ST +S++ ++T
Sbjct: 488 SSSIFSTATEATDTSVQTSSAIYDSSSTSNIQSSSSVYAS-STGALSSNSLSSSTSSVST 546
Query: 244 KYSPYFDRTRFASS 203
Y P + +ASS
Sbjct: 547 SYIPNASSSVYASS 560
>SPCC4B3.17 |cbp3||ubiquinol cytochrome-c reductase assembly protein
Cbp3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 283
Score = 26.2 bits (55), Expect = 6.2
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 754 SSLMRPSILLLQKYMVTKQSQMYQATRFSRF 846
+S ++ L+ QKY+ KQ+ Y+AT +R+
Sbjct: 74 NSFLKKISLIYQKYISPKQNLYYEATGTARY 104
>SPBC1778.04 |spo6||Spo4-Spo6 kinase complex regulatory subunit
Spo6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -3
Query: 835 ILLPDTSDFVLSPCTFVTGELKASSEKKNNDPLKTIRALFLAC 707
IL P + C F TG + K+N P IR L+C
Sbjct: 281 ILWPSLAITAQGRCPFNTGRRRELKITKHNHPAHEIRKQLLSC 323
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,434,343
Number of Sequences: 5004
Number of extensions: 67826
Number of successful extensions: 212
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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