Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_C13
(885 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z36753-9|CAA85337.1| 445|Caenorhabditis elegans Hypothetical pr... 200 8e-52
U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical pr... 34 0.16
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 32 0.63
Z83125-1|CAB05620.2| 420|Caenorhabditis elegans Hypothetical pr... 31 1.1
AY037795-1|AAK94760.1| 420|Caenorhabditis elegans GLY-16 protein. 31 1.1
Z71262-10|CAA95816.4| 436|Caenorhabditis elegans Hypothetical p... 30 1.9
Z71262-9|CAA95817.2| 440|Caenorhabditis elegans Hypothetical pr... 30 1.9
AY037801-1|AAK94766.1| 436|Caenorhabditis elegans GLY-19 protein. 30 1.9
AY037799-1|AAK94764.1| 352|Caenorhabditis elegans GLY-19 protein. 30 1.9
AY037797-1|AAK94762.1| 412|Caenorhabditis elegans GLY-18 protein. 30 1.9
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 30 1.9
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 29 3.3
AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell... 29 5.8
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z36753-9|CAA85337.1| 445|Caenorhabditis elegans Hypothetical
protein T09A5.11 protein.
Length = 445
Score = 200 bits (489), Expect = 8e-52
Identities = 109/260 (41%), Positives = 145/260 (55%), Gaps = 2/260 (0%)
Frame = +3
Query: 111 VLXXNLNXKATHSQFFKSLQXRGYGLTFKLADDANLVLSKYGEYLYKNLIVFAPSVLEFG 290
VL K THS F S++ RG+ LT + ADD+ L L K+G+ ++ +L + AP V FG
Sbjct: 25 VLGETAAVKDTHSVFLNSVKERGHELTVRAADDSQLALFKHGQLIFDHLFILAPGVQVFG 84
Query: 291 GQVDSEAITKFIDDXXXXXXXXXXXXXDVYREIASECGFEMDEESAAVIDHFNYDVT-DE 467
G + I+KF+D D REIA+E GFE +E +VIDH NYD T D
Sbjct: 85 GSLSPSEISKFVDAGGNVLVAAGSNIGDALREIAAEHGFEFEEAGTSVIDHHNYDQTLDS 144
Query: 468 GDHTRIVVSPKNLIKAPTIVGEQ-NTQPLLFEGTGLIVDKDNSLVLPILSADSTAYSYNP 644
GDHT +VV LI A IVG P+LF+G GL+ K N+L L I+ A TAYSY+P
Sbjct: 145 GDHTTLVVGKDQLISAELIVGNSAKLHPVLFKGIGLVAGKTNNLALSIVRASGTAYSYDP 204
Query: 645 KSQVKEYPHAVGRKTVLIAALQARNNARIVFSGSLFFFSDEAFNSPVTKVHGDKTKSDVS 824
K+ P G +T+L+ LQ+RNNARIVF+GS FS+ F++ V+ + S
Sbjct: 205 KAVRATNPSIAGSRTLLVGGLQSRNNARIVFTGSSELFSNTFFSAKTNSVN-PSVQGAQS 263
Query: 825 GNKILAIRLTEWVFGXRGRL 884
GN A +T WV G L
Sbjct: 264 GNADFATAITRWVMKESGVL 283
>U21310-3|AAA62522.2| 1288|Caenorhabditis elegans Hypothetical
protein F40H6.5 protein.
Length = 1288
Score = 33.9 bits (74), Expect = 0.16
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAADSSSISNPHSEAISLYTSPAAALPAIRRFP-PSSMNLVMASLSTC 293
PS S SMT S S ++ S +S +PA + P I + PSS N S++T
Sbjct: 486 PSYAFSTTTSSMTTTASDSTTSDSSVIVSSSKNPAVSNPFITTYSLPSSPNNPFISITTT 545
Query: 292 PPNSSTEGANT 260
P ++S++ +T
Sbjct: 546 PDSASSQKIST 556
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 31.9 bits (69), Expect = 0.63
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS TS ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 181 PSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTT 240
Query: 295 CPPNSSTEGANT 260
P +STE ++
Sbjct: 241 APETTSTESPSS 252
Score = 31.9 bits (69), Expect = 0.63
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = -3
Query: 472 SPSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLS 299
SPSS T+ ++ + T A +++S P S + T+ A PPSS V + +
Sbjct: 525 SPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTT 584
Query: 298 TCPPNSSTE 272
T P +STE
Sbjct: 585 TAPETTSTE 593
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS T+ ++ + T A +++S +P S + T+ A PPSS V + +T
Sbjct: 227 PSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTT 286
Query: 295 CPPNSSTE 272
P +STE
Sbjct: 287 APETTSTE 294
Score = 31.5 bits (68), Expect = 0.83
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS T+ ++ + T A +++S +P S + T+ A PPSS V + +T
Sbjct: 503 PSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTT 562
Query: 295 CPPNSSTE 272
P +STE
Sbjct: 563 APETTSTE 570
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS TS ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 135 PSSSTSPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTT 194
Query: 295 CPPNSSTE 272
P +STE
Sbjct: 195 APETTSTE 202
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS TS ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 710 PSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTT 769
Query: 295 CPPNSSTE 272
P +STE
Sbjct: 770 APETTSTE 777
Score = 31.1 bits (67), Expect = 1.1
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS TS ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 848 PSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTT 907
Query: 295 CPPNSSTE 272
P +STE
Sbjct: 908 APETTSTE 915
Score = 30.7 bits (66), Expect = 1.4
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Frame = -3
Query: 598 TKLLSLSTISPVPSNSRGCVFCSPTIVGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADS 419
T + +TI+ + S S T V +TT SS T + TA ++
Sbjct: 415 TTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPET 474
Query: 418 SSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLSTCPPNSSTEGANT 260
+S P S + T+ A PPSS V + +T P +STE ++
Sbjct: 475 TSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTESPSS 528
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -3
Query: 469 PSSVTS*LKWS-MTAADSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS TS ++ + +TA +++S P S + T+ A PPSS V + +T
Sbjct: 802 PSSSTSPVQTTTITAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTT 861
Query: 295 CPPNSSTE 272
P +STE
Sbjct: 862 APETTSTE 869
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS T+ ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 89 PSSSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTT 148
Query: 295 CPPNSSTEGANT 260
P +STE ++
Sbjct: 149 APETTSTEAPSS 160
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS T+ ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 549 PSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTT 608
Query: 295 CPPNSSTE 272
P +STE
Sbjct: 609 APETTSTE 616
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS T+ ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 572 PSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTT 631
Query: 295 CPPNSSTE 272
P +STE
Sbjct: 632 APETTSTE 639
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS T+ ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 595 PSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTT 654
Query: 295 CPPNSSTE 272
P +STE
Sbjct: 655 APETTSTE 662
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS T+ ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 273 PSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTT 332
Query: 295 CPPNSSTE 272
P +STE
Sbjct: 333 APETTSTE 340
Score = 29.1 bits (62), Expect = 4.4
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 469 PSSVTS*LKWSMTAA-DSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNL-VMASLST 296
PSS T+ ++ + T A +++S P S + T+ A PPSS V + +T
Sbjct: 664 PSSSTTPVQTTTTTAPETTSTEPPSSSNTPVQTTTTTAPETTSTEPPSSSTSPVQTTTTT 723
Query: 295 CPPNSSTE 272
P +STE
Sbjct: 724 APETTSTE 731
>Z83125-1|CAB05620.2| 420|Caenorhabditis elegans Hypothetical
protein T15D6.2 protein.
Length = 420
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -2
Query: 461 SHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 366
S+ I+ VYDC +FL HLKS + + Y+SG
Sbjct: 164 SYEIINSVYDCLKFLSHLKSNW--KYFQYLSG 193
>AY037795-1|AAK94760.1| 420|Caenorhabditis elegans GLY-16 protein.
Length = 420
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -2
Query: 461 SHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 366
S+ I+ VYDC +FL HLKS + + Y+SG
Sbjct: 164 SYEIINSVYDCLKFLSHLKSNW--KYFQYLSG 193
>Z71262-10|CAA95816.4| 436|Caenorhabditis elegans Hypothetical
protein F22D6.12 protein.
Length = 436
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 473 VSLISHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 366
+S SH I++ VYDC FL HL++ + + Y+SG
Sbjct: 177 ISWGSHEIIDSVYDCLEFLSHLETDW--RYFQYLSG 210
>Z71262-9|CAA95817.2| 440|Caenorhabditis elegans Hypothetical
protein F22D6.11 protein.
Length = 440
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 461 SHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 366
SH I+ YDC FL HLKS + + Y+SG
Sbjct: 184 SHEIINSAYDCLEFLSHLKSDW--RYFQYLSG 213
>AY037801-1|AAK94766.1| 436|Caenorhabditis elegans GLY-19 protein.
Length = 436
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 473 VSLISHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 366
+S SH I++ VYDC FL HL++ + + Y+SG
Sbjct: 177 ISWGSHEIIDSVYDCLEFLSHLETDW--RYFQYLSG 210
>AY037799-1|AAK94764.1| 352|Caenorhabditis elegans GLY-19 protein.
Length = 352
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -2
Query: 473 VSLISHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 366
+S SH I++ VYDC FL HL++ + + Y+SG
Sbjct: 93 ISWGSHEIIDSVYDCLEFLSHLETDW--RYFQYLSG 126
>AY037797-1|AAK94762.1| 412|Caenorhabditis elegans GLY-18 protein.
Length = 412
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = -2
Query: 461 SHIIVEVVYDCCRFLVHLKSTF*SDFSIYVSG 366
SH I+ YDC FL HLKS + + Y+SG
Sbjct: 156 SHEIINSAYDCLEFLSHLKSDW--RYFQYLSG 185
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = -3
Query: 433 TAADSSSISNPHSEAISLYTSPAAALPAIRRFPPSSMNLVMASLSTCPPNSSTEGANT 260
T SS + S A + T+ + + P S +L M+SLST P+SST GA +
Sbjct: 424 TTGGSSPSTAGTSLASTAVTTETSIGSSSTPLPSQSTSLSMSSLSTYTPSSSTAGATS 481
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical
protein T16G12.5 protein.
Length = 1142
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 867 QTPIQ*GESRESCCLIHLTLFCHHVLL 787
Q P Q + CCLI LT+F H+LL
Sbjct: 150 QPPFQSCTNSPPCCLIILTIFLKHILL 176
>AC024201-2|AAK82924.1| 556|Caenorhabditis elegans Abnormal cell
lineage protein 17,isoform b protein.
Length = 556
Score = 28.7 bits (61), Expect = 5.8
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 182 WLNFQTCG*CKSCPVKIR 235
W NF CG C S PVK++
Sbjct: 502 WKNFIFCGMCSSAPVKVK 519
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.3 bits (60), Expect = 7.7
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Frame = -3
Query: 520 VGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSISNPHSEAI-SLYTSPAAALPAIR 344
+G+ T+ S SS L+ A +S ++ + + S YT AAA
Sbjct: 2324 IGSASGLSSQATIIASSSSSANESLQSRQAATSVTSANSGRTRGVRSYYTEEAAARARAF 2383
Query: 343 RFPPSSMNLVMASLSTCPPNSSTEGANTMRFLYKYSPYFDRTRFA 209
PP +L + +T ++ MR +K Y R+R A
Sbjct: 2384 GIPPEMASLSLRMETTQNAQTAFSAYQKMRREWKDRVYLARSRIA 2428
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 28.3 bits (60), Expect = 7.7
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Frame = -3
Query: 520 VGALIRFLGDTTMRVWSPSSVTS*LKWSMTAADSSSISNPHSEAI-SLYTSPAAALPAIR 344
+G+ T+ S SS L+ A +S ++ + + S YT AAA
Sbjct: 2324 IGSASGLSSQATIIASSSSSANESLQSRQAATSVTSANSGRTRGVRSYYTEEAAARARAF 2383
Query: 343 RFPPSSMNLVMASLSTCPPNSSTEGANTMRFLYKYSPYFDRTRFA 209
PP +L + +T ++ MR +K Y R+R A
Sbjct: 2384 GIPPEMASLSLRMETTQNAQTAFSAYQKMRREWKDRVYLARSRIA 2428
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,108,071
Number of Sequences: 27780
Number of extensions: 385997
Number of successful extensions: 1125
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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