Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_C12
         (775 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0DYC5 Cluster: Chromosome undetermined scaffold_7, who...    35   2.0  
UniRef50_A2DER5 Cluster: Putative uncharacterized protein; n=2; ...    34   3.4  
UniRef50_A0C142 Cluster: Chromosome undetermined scaffold_140, w...    34   4.5  
UniRef50_Q8IKX9 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_Q22MF4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_A0DI28 Cluster: Chromosome undetermined scaffold_51, wh...    33   7.9  

>UniRef50_A0DYC5 Cluster: Chromosome undetermined scaffold_7, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_7,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 232

 Score = 35.1 bits (77), Expect = 2.0
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
 Frame = +1

Query: 298 YIKVKQEESSTQTQEIKNAPRKAKLRQDVKVLKQKLKSR----EIVIVNIKSILDLLKK 462
           YIK K++ S  +T +IK  P+K K   D   +K  ++ R    E++ + IK I   + K
Sbjct: 150 YIKNKKQRSQKKTHQIKEMPQKMKKENDTSKIKPHIEIRAIFQELICIKIKLISKPISK 208


>UniRef50_A2DER5 Cluster: Putative uncharacterized protein; n=2;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1022

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 16/50 (32%), Positives = 30/50 (60%)
 Frame = +1

Query: 313 QEESSTQTQEIKNAPRKAKLRQDVKVLKQKLKSREIVIVNIKSILDLLKK 462
           ++ES+T  +E   +PR+A+L++ ++ LKQ+       I  IK  +D  K+
Sbjct: 5   EQESNTDGEEQTISPREAELQEQIETLKQEKLDLNAQIEQIKGFMDKYKQ 54


>UniRef50_A0C142 Cluster: Chromosome undetermined scaffold_140,
           whole genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_140,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 530

 Score = 33.9 bits (74), Expect = 4.5
 Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 2/51 (3%)
 Frame = +1

Query: 280 NFWKMSYIKVKQEESSTQTQEIKNAPRKAKLRQDVKVLKQK--LKSREIVI 426
           N +K  Y+KVKQ + + Q+++ K    K KL +  +V ++K  LK+++ VI
Sbjct: 453 NAYKNKYLKVKQNQKTLQSEQ-KYLEEKVKLMESERVFEEKEALKTKDYVI 502


>UniRef50_Q8IKX9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 504

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
 Frame = +1

Query: 304 KVKQEESSTQTQ--EIKNAPRKAKLRQDVKVLKQKLKSREIVIVNIKSILD 450
           K  +++SST  +  +I N     KL++D K LK++L  +E  I N+K ILD
Sbjct: 14  KENEKKSSTNDKKYDIANDENYKKLKEDKKRLKKELLYKENEISNLKKILD 64


>UniRef50_Q22MF4 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 690

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 15/58 (25%), Positives = 34/58 (58%)
 Frame = +1

Query: 292 MSYIKVKQEESSTQTQEIKNAPRKAKLRQDVKVLKQKLKSREIVIVNIKSILDLLKKN 465
           ++Y++  +E+     +E+KN   K    Q V+V+ Q+L++ +    N+K  ++++K N
Sbjct: 175 VNYLQKVREKLQVYFEELKNMEGKINRDQQVQVMMQQLENYQTFSENLKRDIEIMKVN 232


>UniRef50_A0DI28 Cluster: Chromosome undetermined scaffold_51, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_51,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 1335

 Score = 33.1 bits (72), Expect = 7.9
 Identities = 19/56 (33%), Positives = 33/56 (58%)
 Frame = +1

Query: 304 KVKQEESSTQTQEIKNAPRKAKLRQDVKVLKQKLKSREIVIVNIKSILDLLKKNGD 471
           K++QE S T  + IK    K   ++++ +LKQ+  + +  IV IKS+LD    +G+
Sbjct: 513 KLQQENSETTAEYIK---LKENTQREIHLLKQERTNLQNEIVEIKSLLDTYINSGE 565


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,459,951
Number of Sequences: 1657284
Number of extensions: 12869970
Number of successful extensions: 33588
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33571
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65027411410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)