Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_C12
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.22 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.7  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.7  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   3.6  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = -2

Query: 732 LYYYY*VQLIFCS---LISQILFLFICVFY 652
           +YY+Y + L+FC    + +  L   +C++Y
Sbjct: 258 IYYFYYMHLLFCCAFIIFTMHLLFLLCIYY 287



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 9/42 (21%), Positives = 19/42 (45%)
 Frame = -2

Query: 750 LFTKYWLYYYY*VQLIFCSLISQILFLFICVFYVSLACDVYC 625
           +FT + L+    +   +C+LI  +   + C  ++      YC
Sbjct: 274 IFTMHLLFLLC-IYYFYCALIILLCIYYFCRAFIIFPTHFYC 314



 Score = 21.8 bits (44), Expect = 6.3
 Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
 Frame = -2

Query: 750 LFTKYWL----YYYY*VQLIFCSLISQILFLFICVFYVSLACDVY 628
           +FT ++L    Y+YY   ++ C       F+   V  + L C  Y
Sbjct: 91  IFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYY 135


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 6/14 (42%), Positives = 13/14 (92%)
 Frame = -1

Query: 379 LVVILLFSGHFLFL 338
           L+++L+F+ HF+F+
Sbjct: 235 LILLLMFTSHFIFI 248


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 729 YYYY*VQLIFCSLISQILFLFICVFYVSLACDVYCEPNKI 610
           YY    QL+  +L+ Q+  L   +F + L   V  E NKI
Sbjct: 218 YYKDTAQLVSLALLMQLTQLVPALFVIYLCGRVMEEQNKI 257


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -2

Query: 735 WLYYYY*VQLIFCSLISQILFLFICVFYVSLACDVYCEPNKINK 604
           W   Y  + L   S +SQ++ +  C F V L    +C  N+  K
Sbjct: 161 WRCLYRWIVLYTLSKMSQVMLIQFCAFVVVLK-QKFCVVNQYIK 203


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,884
Number of Sequences: 336
Number of extensions: 3790
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)