Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_C12
         (775 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT028805-1|ABI34186.1|  475|Drosophila melanogaster RE65147p pro...    29   5.4  
AY071507-1|AAL49129.1|  493|Drosophila melanogaster RE56074p pro...    29   5.4  
AE014134-960|AAN10553.1|  493|Drosophila melanogaster CG11149-PB...    29   5.4  
AE014134-959|AAF52281.1|  493|Drosophila melanogaster CG11149-PA...    29   5.4  

>BT028805-1|ABI34186.1|  475|Drosophila melanogaster RE65147p
           protein.
          Length = 475

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 163 ILPYIRFIDKFLLVVARKHVYHLPDVKRTRRIF 261
           + P + F+D+FL +VAR H     D ++ RR++
Sbjct: 274 LYPSVGFVDQFLDMVARNHSVLALDPRQRRRVY 306


>AY071507-1|AAL49129.1|  493|Drosophila melanogaster RE56074p
           protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 163 ILPYIRFIDKFLLVVARKHVYHLPDVKRTRRIF 261
           + P + F+D+FL +VAR H     D ++ RR++
Sbjct: 274 LYPSVGFVDQFLDMVARNHSVLALDPRQRRRVY 306


>AE014134-960|AAN10553.1|  493|Drosophila melanogaster CG11149-PB,
           isoform B protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 163 ILPYIRFIDKFLLVVARKHVYHLPDVKRTRRIF 261
           + P + F+D+FL +VAR H     D ++ RR++
Sbjct: 274 LYPSVGFVDQFLDMVARNHSVLALDPRQRRRVY 306


>AE014134-959|AAF52281.1|  493|Drosophila melanogaster CG11149-PA,
           isoform A protein.
          Length = 493

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 163 ILPYIRFIDKFLLVVARKHVYHLPDVKRTRRIF 261
           + P + F+D+FL +VAR H     D ++ RR++
Sbjct: 274 LYPSVGFVDQFLDMVARNHSVLALDPRQRRRVY 306


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,107,284
Number of Sequences: 53049
Number of extensions: 565281
Number of successful extensions: 1198
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1198
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)