Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_C12
         (775 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   2.4  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    22   5.5  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    22   5.5  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    22   5.5  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    22   5.5  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    22   5.5  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    22   5.5  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    22   5.5  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    22   5.5  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   5.5  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     22   5.5  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 575 LHKIGEMLYYLFILLGSQYTSQAK 646
           +H +G  L +LF L+G   T Q K
Sbjct: 332 IHTLGNTLVFLFDLIGRNPTVQNK 355


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 435 YIYNHYFATFKFLFQNLNIL 376
           Y YN+Y   +K L+ N+N +
Sbjct: 89  YNYNNYNNNYKPLYYNINYI 108


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 435 YIYNHYFATFKFLFQNLNIL 376
           Y YN+Y   +K L+ N+N +
Sbjct: 89  YNYNNYNNNYKPLYYNINYI 108


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 435 YIYNHYFATFKFLFQNLNIL 376
           Y YN+Y   +K L+ N+N +
Sbjct: 89  YNYNNYNNNYKPLYYNINYI 108


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 435 YIYNHYFATFKFLFQNLNIL 376
           Y YN+Y   +K L+ N+N +
Sbjct: 89  YNYNNYNNNYKPLYYNINYI 108


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 435 YIYNHYFATFKFLFQNLNIL 376
           Y YN+Y   +K L+ N+N +
Sbjct: 322 YNYNNYNNNYKPLYYNINYI 341


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 435 YIYNHYFATFKFLFQNLNIL 376
           Y YN+Y   +K L+ N+N +
Sbjct: 322 YNYNNYNNNYKPLYYNINYI 341


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 435 YIYNHYFATFKFLFQNLNIL 376
           Y YN+Y   +K L+ N+N +
Sbjct: 322 YNYNNYNNNYKPLYYNINYI 341


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -2

Query: 435 YIYNHYFATFKFLFQNLNIL 376
           Y YN+Y   +K L+ N+N +
Sbjct: 311 YNYNNYNNNYKPLYYNINYI 330


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 6/20 (30%), Positives = 15/20 (75%)
 Frame = -1

Query: 502 FRNLNFNSIKNRHFSLINLK 443
           + N N+N+ K  ++++IN++
Sbjct: 341 YNNNNYNNYKKLYYNIINIE 360


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +1

Query: 277 WNFWKMSYIKVKQEESSTQTQEIKNAPRKAKLRQD 381
           W+F + ++I V  +E  +   E      KAK  Q+
Sbjct: 116 WDFQECTFISVNGKEVHSGNIEAVTTKEKAKFPQE 150


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,179
Number of Sequences: 438
Number of extensions: 4389
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24275400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)