Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_C11
         (792 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.66 
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    25   2.7  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         25   2.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         24   4.7  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         24   4.7  
AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding pr...    23   8.2  
AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding pr...    23   8.2  
AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    23   8.2  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 27.1 bits (57), Expect = 0.66
 Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
 Frame = -2

Query: 725 ISTCAQSPATTL*LVD--AKESSLRDKSNKPRLCLGDMLES-TEPLSSPRICSLSDPNSI 555
           I+T A S   +L   D  +   S R K+ KP   LG +L + T P+ S RI S S PN +
Sbjct: 155 IATGATSSTVSLTYEDELSPGGSARRKT-KPNSPLGSLLAAVTSPVLS-RISSASSPN-L 211

Query: 554 LCGGETCGTLCSSSPS*FPYKFLVCNAKSPAGVISKSPGKI 432
              G T      SSPS    ++L+ + + P G   +  G I
Sbjct: 212 SSNGSTL-----SSPSGSRMEYLLPHQQHPPGAGVQGAGPI 247


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 490 NLYGNQEGEEEQRVPQVSPPHSMEFGSDNE 579
           +L  +Q  +E+Q   Q  PPHSM    D E
Sbjct: 858 HLADSQVKKEQQITSQALPPHSMHTDCDYE 887


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
 Frame = -2

Query: 608 TEPLSSPRICS-LSDPNSILCGGETCGTLCSSSP 510
           T P      CS LS  +S  C     G+LC +SP
Sbjct: 229 TAPAIPVSSCSPLSTASSASCSSSAAGSLCPTSP 262


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 502 NQEGEEEQRVPQVSPPHSMEFGSDN 576
           +Q   ++Q  PQ SPP S+ F   N
Sbjct: 109 HQHHPQQQPSPQTSPPASISFSITN 133


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 502 NQEGEEEQRVPQVSPPHSMEFGSDN 576
           +Q   ++Q  PQ SPP S+ F   N
Sbjct: 109 HQHHPQQQPSPQTSPPASISFSITN 133


>AY146760-1|AAO12075.1|  313|Anopheles gambiae odorant-binding
           protein AgamOBP31 protein.
          Length = 313

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 263 SNCCNAFETF 234
           +NCC A+ETF
Sbjct: 122 NNCCQAYETF 131


>AF393487-1|AAL60412.1|  304|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 263 SNCCNAFETF 234
           +NCC A+ETF
Sbjct: 122 NNCCQAYETF 131


>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 8.2
 Identities = 10/24 (41%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
 Frame = -2

Query: 572 SDPNSILCGG--ETCGTLCSSSPS 507
           SDP  I+CGG       +C   PS
Sbjct: 328 SDPKCIVCGGPHRIAAPMCKGPPS 351


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 820,368
Number of Sequences: 2352
Number of extensions: 16533
Number of successful extensions: 37
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)