Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_C09
(796 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 161 2e-38
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 157 4e-37
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 154 3e-36
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 135 1e-30
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 131 2e-29
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 129 9e-29
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 128 2e-28
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 128 2e-28
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 128 2e-28
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 128 2e-28
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 126 8e-28
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 122 1e-26
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 120 6e-26
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 118 2e-25
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 115 1e-24
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 115 1e-24
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 114 2e-24
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 110 3e-23
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 110 3e-23
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 108 1e-22
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 108 2e-22
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 107 3e-22
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 107 3e-22
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 105 1e-21
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 104 2e-21
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 103 5e-21
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 101 2e-20
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 101 3e-20
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 100 5e-20
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 100 5e-20
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 100 5e-20
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 100 5e-20
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 98 2e-19
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 93 6e-18
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 93 1e-17
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 91 2e-17
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 91 3e-17
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 89 9e-17
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 89 2e-16
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 87 4e-16
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 85 3e-15
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 83 1e-14
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 82 1e-14
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 79 1e-13
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 77 7e-13
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 77 7e-13
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 76 9e-13
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 74 4e-12
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 74 4e-12
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 74 5e-12
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 73 8e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 73 8e-12
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 73 8e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 73 1e-11
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 71 3e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 71 4e-11
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 71 4e-11
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 71 4e-11
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 70 8e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 69 2e-10
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 69 2e-10
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 66 1e-09
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 66 1e-09
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 66 1e-09
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 66 1e-09
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 65 2e-09
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 65 2e-09
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 65 2e-09
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 64 3e-09
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 64 3e-09
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 63 7e-09
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 62 1e-08
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 62 2e-08
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 62 2e-08
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 61 3e-08
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 61 3e-08
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 61 4e-08
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 60 5e-08
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 60 6e-08
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 60 6e-08
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 59 1e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 1e-07
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 59 1e-07
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 59 1e-07
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 59 1e-07
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 58 3e-07
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 58 3e-07
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 57 4e-07
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 57 6e-07
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 55 2e-06
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 55 2e-06
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 53 7e-06
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 53 1e-05
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 52 2e-05
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 50 9e-05
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 49 2e-04
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 48 2e-04
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 48 3e-04
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 46 8e-04
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 46 0.001
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 44 0.004
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 40 0.095
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 36 0.89
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 35 2.0
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 34 4.7
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 34 4.7
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 33 6.2
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 161 bits (390), Expect = 2e-38
Identities = 89/166 (53%), Positives = 101/166 (60%)
Frame = -1
Query: 547 TNKGN*SNDILFNRXXXXXXXXXXXXXIDEIPAKCSEKIARSTDLPLCAILDESGG*TVH 368
TN G S I +R I+E PAKC+EKI STD P CAI SGG TVH
Sbjct: 50 TNSGMRSMVIPADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVH 109
Query: 367 PVPAPFSTILLEINNIREGGRSQNLILFIRGNAISGAPSIRGTNQFPNPPXXXXXXXXXX 188
PVP P STI L + ++EGG +QNL+LFIRGNA+SGAP++ GTNQFPNPP
Sbjct: 110 PVPTPLSTIPLNKSKVKEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKI 169
Query: 187 XXKACAVTIVL*I*XAPINEPGLPNSARIKRLKDVPMMPXQRPKKK 50
KA AVT+ L I PI PG PNSARIK L DVP MP PK K
Sbjct: 170 ITKAWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMK 214
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/50 (70%), Positives = 41/50 (82%)
Frame = -3
Query: 698 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAQ 549
NKC + IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T Q
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQ 49
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 157 bits (380), Expect = 4e-37
Identities = 85/148 (57%), Positives = 90/148 (60%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
RAELG PGSLIG QIYNTIVTAHA N LVPL+LGAPD+AFPR+
Sbjct: 35 RAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRM 94
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 95 NNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISS 154
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
SFDQ+PLFV
Sbjct: 155 ILGAINFITTIINMRMNNLSFDQMPLFV 182
Score = 95.5 bits (227), Expect = 1e-18
Identities = 45/62 (72%), Positives = 48/62 (77%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P AVGITAF AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP
Sbjct: 179 PLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHP 238
Query: 718 EV 723
++
Sbjct: 239 KL 240
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 154 bits (373), Expect = 3e-36
Identities = 82/148 (55%), Positives = 89/148 (60%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R ELG PGSLIG QIYNTIVTAHA N L+PL+LGAPD+AFPR+
Sbjct: 11 RTELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRM 70
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAGISS
Sbjct: 71 NNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISS 130
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
SFDQ+PLF+
Sbjct: 131 ILGAINFITTIINMRINKMSFDQMPLFI 158
Score = 103 bits (247), Expect = 5e-21
Identities = 50/66 (75%), Positives = 51/66 (77%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P AVGITA AGAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF FFGHP
Sbjct: 155 PLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFWFFGHP 214
Query: 718 EVYILI 735
EVYILI
Sbjct: 215 EVYILI 220
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 135 bits (327), Expect = 1e-30
Identities = 76/150 (50%), Positives = 85/150 (56%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
RAELG PG+L+G QIYN IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 39 RAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRM 98
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAGISS
Sbjct: 99 NNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISS 158
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
S Q PLFV S
Sbjct: 159 ILGAINFITTAINMKPPAISQYQTPLFVWS 188
Score = 119 bits (286), Expect = 1e-25
Identities = 57/85 (67%), Positives = 63/85 (74%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 183 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 242
Query: 718 EVYILILPGFGIISHXISQERGKKE 792
EVYILILPGFG+ISH ++ GKKE
Sbjct: 243 EVYILILPGFGMISHVVTYYAGKKE 267
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 131 bits (317), Expect = 2e-29
Identities = 71/152 (46%), Positives = 82/152 (53%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R ELG PGS IG Q+YN +VTAHA N LVPL+LGAPD+AFPR+
Sbjct: 21 RVELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRL 80
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG+SS
Sbjct: 81 NNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSS 140
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFVLSCR 560
+ + LFV S +
Sbjct: 141 ILGAVNFITTVINMRWGAMKIELVSLFVWSVK 172
Score = 74.1 bits (174), Expect = 4e-12
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +1
Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 699
+V ITA AGAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 170 SVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 129 bits (311), Expect = 9e-29
Identities = 71/148 (47%), Positives = 81/148 (54%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
RAEL PG+L+G QIYN IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 38 RAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPILIGGFGNWLVPLMIGAPDMAFPRM 97
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 98 NNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
S Q PLFV
Sbjct: 158 ILGAINFITTTINMKPPTISQYQTPLFV 185
Score = 121 bits (291), Expect = 2e-26
Identities = 58/85 (68%), Positives = 63/85 (74%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P AV +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Query: 718 EVYILILPGFGIISHXISQERGKKE 792
EVYILILPGFGIISH ++ GKKE
Sbjct: 242 EVYILILPGFGIISHVVAYYAGKKE 266
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 128 bits (309), Expect = 2e-28
Identities = 70/148 (47%), Positives = 81/148 (54%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
RAEL PG+L+G QIYN IVTAHA N L+PL++GAPD+AFPR+
Sbjct: 27 RAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLIPLMIGAPDMAFPRM 86
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAGISS
Sbjct: 87 NNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISS 146
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
S Q PLFV
Sbjct: 147 ILGAINFITTIMNMKPPAISQYQTPLFV 174
Score = 41.5 bits (93), Expect = 0.024
Identities = 22/41 (53%), Positives = 24/41 (58%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP 660
P AV ITA A IT+LLTDRNLNT+FFDP
Sbjct: 171 PLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 128 bits (309), Expect = 2e-28
Identities = 71/150 (47%), Positives = 82/150 (54%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
RAEL PG+L+G QIYN IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 38 RAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMPVMIGGFGNWLVPLMIGAPDMAFPRM 97
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG+SS
Sbjct: 98 NNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSS 157
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
+ Q PLFV S
Sbjct: 158 ILGAINFITTIINMKPPAITQYQTPLFVWS 187
Score = 118 bits (285), Expect = 1e-25
Identities = 56/85 (65%), Positives = 63/85 (74%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P +V +TA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Query: 718 EVYILILPGFGIISHXISQERGKKE 792
EVYILILPGFG+ISH ++ GKKE
Sbjct: 242 EVYILILPGFGMISHVVTYYAGKKE 266
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 128 bits (309), Expect = 2e-28
Identities = 61/81 (75%), Positives = 65/81 (80%)
Frame = +1
Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 732
+V ITA AGAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGHPEVYIL
Sbjct: 171 SVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGHPEVYIL 230
Query: 733 ILPGFGIISHXISQERGKKET 795
ILPGFGIISH I E GKKET
Sbjct: 231 ILPGFGIISHMIFNESGKKET 251
Score = 116 bits (280), Expect = 5e-25
Identities = 63/147 (42%), Positives = 77/147 (52%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R ELG PGSLIG QIYN+IVT+HA N L+PL+LG+PD++FPR+
Sbjct: 22 RLELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPRM 81
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG SS
Sbjct: 82 NNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASS 141
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLF 545
+ D++ LF
Sbjct: 142 IMGAVNFITTILNMRSNLFNMDKMSLF 168
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 128 bits (308), Expect = 2e-28
Identities = 70/150 (46%), Positives = 82/150 (54%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
RAELG PG+L+G IYN IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 38 RAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRM 97
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG+SS
Sbjct: 98 NNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSS 157
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
+ Q PLFV S
Sbjct: 158 ILGAINFITTIINMKPPAMTQYQTPLFVWS 187
Score = 119 bits (286), Expect = 1e-25
Identities = 57/85 (67%), Positives = 63/85 (74%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P +V ITA A IT+LLTDRNLNT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHP 241
Query: 718 EVYILILPGFGIISHXISQERGKKE 792
EVYILILPGFG+ISH ++ GKKE
Sbjct: 242 EVYILILPGFGMISHIVTYYSGKKE 266
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 126 bits (303), Expect = 8e-28
Identities = 67/150 (44%), Positives = 82/150 (54%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R EL +PGS++G +YN IVTAHA N VPL++GAPD+AFPR+
Sbjct: 39 RLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMPTMIGGFGNWFVPLMIGAPDMAFPRL 98
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG+SS
Sbjct: 99 NNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSS 158
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
+ ++PLFV S
Sbjct: 159 ILGAMNFITTVMNMRTPGMTMSRIPLFVWS 188
Score = 74.9 bits (176), Expect = 2e-12
Identities = 37/58 (63%), Positives = 40/58 (68%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 711
P +V ITA AGAIT+LLTDR NT+FFDPAGGGDPILYQHLF FFG
Sbjct: 183 PLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFWFFG 240
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 122 bits (293), Expect = 1e-26
Identities = 58/83 (69%), Positives = 63/83 (75%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P +V +TAF AGAIT+LLTDRN NT+FFDPAGGGDPILYQHLF FFGHP
Sbjct: 185 PLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFWFFGHP 244
Query: 718 EVYILILPGFGIISHXISQERGK 786
EVYILILPGFGIISH +S GK
Sbjct: 245 EVYILILPGFGIISHIVSTFSGK 267
Score = 114 bits (274), Expect = 3e-24
Identities = 63/152 (41%), Positives = 79/152 (51%), Gaps = 2/152 (1%)
Frame = +3
Query: 105 RAELGNPGSLI--GAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL PG I G Q+YN ++TAHA N VP+++GAPD+AFP
Sbjct: 39 RMELARPGDQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGAPDMAFP 98
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
R+NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G+
Sbjct: 99 RLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGV 158
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
SS + +LPLFV S
Sbjct: 159 SSILGSINFITTIFNMRGPGMTMHRLPLFVWS 190
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 120 bits (288), Expect = 6e-26
Identities = 68/156 (43%), Positives = 81/156 (51%)
Frame = +3
Query: 246 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 425
L+LGAPD+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVD
Sbjct: 1 LMLGAPDMAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVD 60
Query: 426 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFVLSCRDYSXXXXXXTTCFSW 605
LAI+S I+ +F + + C +Y TCFS
Sbjct: 61 LAIYS---TVINMRSAGITLDRFFFTFSSNFLNF-SITFICMICCNYCYFITSFFTCFSS 116
Query: 606 SYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 713
S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 117 SHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 118 bits (284), Expect = 2e-25
Identities = 54/83 (65%), Positives = 62/83 (74%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF FFGHP
Sbjct: 182 PLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHP 241
Query: 718 EVYILILPGFGIISHXISQERGK 786
EVYILI+PGFG++SH +S GK
Sbjct: 242 EVYILIIPGFGMVSHIVSAFSGK 264
Score = 115 bits (277), Expect = 1e-24
Identities = 67/150 (44%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL PG L G Q+YN I+TAHA N LVP+++GAPD+AFP
Sbjct: 36 RMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFP 95
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
R+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GI
Sbjct: 96 RLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGI 155
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
SS + +LPLFV
Sbjct: 156 SSMLGAMNFITTVLNMRNPGMTLHKLPLFV 185
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 115 bits (277), Expect = 1e-24
Identities = 67/150 (44%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL PG L G Q+YN I+TAHA N LVP+++GAPD+AFP
Sbjct: 36 RMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFP 95
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
R+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GI
Sbjct: 96 RLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGI 155
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
SS + +LPLFV
Sbjct: 156 SSMLGAMNFITTVLNMRNPGMTLHKLPLFV 185
Score = 73.3 bits (172), Expect = 6e-12
Identities = 34/54 (62%), Positives = 38/54 (70%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 699
P A+ +TA AGAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 182 PLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 115 bits (277), Expect = 1e-24
Identities = 67/150 (44%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL PG L G Q+YN I+TAHA N LVP+++GAPD+AFP
Sbjct: 36 RMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFP 95
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
R+NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+GI
Sbjct: 96 RLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGI 155
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
SS + +LPLFV
Sbjct: 156 SSMLGAMNFITTVLNMRNPGMTLHKLPLFV 185
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 114 bits (275), Expect = 2e-24
Identities = 53/78 (67%), Positives = 60/78 (76%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P ++ +TAF AGAIT+LLTDRN NTSFFD +GGGDPILYQHLF FFGHP
Sbjct: 190 PLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFWFFGHP 249
Query: 718 EVYILILPGFGIISHXIS 771
EVYILILPGFG+ISH +S
Sbjct: 250 EVYILILPGFGMISHIVS 267
Score = 111 bits (267), Expect = 2e-23
Identities = 63/152 (41%), Positives = 80/152 (52%), Gaps = 2/152 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL P + L+G QIYN ++TAHA N LVP+++G+PD+AFP
Sbjct: 44 RMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMVMPVMIGGFGNWLVPIMIGSPDMAFP 103
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
R+NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 104 RLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGA 163
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
SS S ++PLFV S
Sbjct: 164 SSILGAVNFISTILNMRSPGQSMYRIPLFVWS 195
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 110 bits (265), Expect = 3e-23
Identities = 66/152 (43%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL PGS L G Q++N +V HA N L+PL++GA D AFP
Sbjct: 37 RLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFP 96
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
RINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL I
Sbjct: 97 RINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSI 156
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
SS + +LPLFV S
Sbjct: 157 SSLLGAINFIVTTLNMRTNGMTMHKLPLFVWS 188
Score = 105 bits (251), Expect = 2e-21
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFGHP
Sbjct: 183 PLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGHP 242
Query: 718 EVYILILPGFGIISHXIS 771
EVYILI+PGFGIISH +S
Sbjct: 243 EVYILIIPGFGIISHVVS 260
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 110 bits (265), Expect = 3e-23
Identities = 66/152 (43%), Positives = 77/152 (50%), Gaps = 2/152 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL PGS L G Q++N +V HA N L+PL++GA D AFP
Sbjct: 37 RLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGATDTAFP 96
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
RINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL I
Sbjct: 97 RINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSI 156
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
SS + +LPLFV S
Sbjct: 157 SSLLGAINFIVTTLNMRTNGMTMHKLPLFVWS 188
Score = 68.9 bits (161), Expect = 1e-10
Identities = 33/67 (49%), Positives = 42/67 (62%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P ++ ITAF + IT+LL DRN NTSFF+ +GGGDPILY+HLF FFG
Sbjct: 183 PLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFWFFGQT 242
Query: 718 EVYILIL 738
I++L
Sbjct: 243 VATIIML 249
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 108 bits (260), Expect = 1e-22
Identities = 53/78 (67%), Positives = 57/78 (73%)
Frame = +1
Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 732
AV ITA AG IT++LTDRN NTSFF+ AGGGDPILYQHLF FFGHPEVYIL
Sbjct: 188 AVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWFFGHPEVYIL 247
Query: 733 ILPGFGIISHXISQERGK 786
I+PGFGIIS IS K
Sbjct: 248 IIPGFGIISTTISANSNK 265
Score = 103 bits (247), Expect = 5e-21
Identities = 56/121 (46%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Frame = +3
Query: 105 RAELGNPG-SLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 281
R EL PG I Q+YN+I+TAHA N L+PL LG PD+ FPR
Sbjct: 38 RLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVMPALIGGFGNFLLPLGLGGPDMGFPR 97
Query: 282 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 461
+NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+GIS
Sbjct: 98 LNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGIS 157
Query: 462 S 464
S
Sbjct: 158 S 158
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 108 bits (259), Expect = 2e-22
Identities = 63/150 (42%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL PGS L G Q++N +V HA N ++PL++GA D++FP
Sbjct: 37 RMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLAMPALIGGFGNYMLPLMIGATDMSFP 96
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
RIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL I
Sbjct: 97 RINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSI 156
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
SS S ++PLFV
Sbjct: 157 SSLLGAINFIVTTLNMRTNGMSMHKMPLFV 186
Score = 104 bits (250), Expect = 2e-21
Identities = 48/78 (61%), Positives = 55/78 (70%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P A+ ITAF + IT+LL DRN NTSFF+ AGGGDPI YQH F FFGHP
Sbjct: 183 PLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFWFFGHP 242
Query: 718 EVYILILPGFGIISHXIS 771
EVYILI+PGFGI+SH +S
Sbjct: 243 EVYILIIPGFGIVSHIVS 260
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 107 bits (257), Expect = 3e-22
Identities = 47/73 (64%), Positives = 58/73 (79%)
Frame = +1
Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 732
+V +TA+ AGAIT+LLTDRN T+FFDPAGGGDPIL+QH+F FFGHPEVYI+
Sbjct: 293 SVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFWFFGHPEVYIV 352
Query: 733 ILPGFGIISHXIS 771
ILP FG+ISH ++
Sbjct: 353 ILPAFGVISHIVA 365
Score = 80.2 bits (189), Expect = 5e-14
Identities = 39/135 (28%), Positives = 63/135 (46%)
Frame = +3
Query: 150 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 329
++N ++T H N +PL++GAPD+AFPR+NN+ +
Sbjct: 159 LWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPRLNNLSYWMYVAGTCLA 218
Query: 330 XXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 509
+++ GAG G T YPP+S+ R+VD AIF++H++G SS
Sbjct: 219 FCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMR 278
Query: 510 XXXXSFDQLPLFVLS 554
+ ++PLF S
Sbjct: 279 APGMTLHKVPLFAWS 293
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 107 bits (257), Expect = 3e-22
Identities = 48/78 (61%), Positives = 57/78 (73%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P +V +T+F A AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGHP
Sbjct: 186 PLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGHP 245
Query: 718 EVYILILPGFGIISHXIS 771
EVYILILPGFG++SH I+
Sbjct: 246 EVYILILPGFGLVSHIIA 263
Score = 96.3 bits (229), Expect = 8e-19
Identities = 58/152 (38%), Positives = 65/152 (42%), Gaps = 2/152 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL PG L G YN I T H N VP+++GAPD++FP
Sbjct: 40 RLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVVMPILFGGFGNYFVPILIGAPDMSFP 99
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
R+NN F E G GTG TVYPPLSS +H G SVDL IFS HL GI
Sbjct: 100 RLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGI 159
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
S LPLFV S
Sbjct: 160 GSIVAAINFICTIFYYKNEAMFNKDLPLFVWS 191
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 105 bits (252), Expect = 1e-21
Identities = 53/78 (67%), Positives = 57/78 (73%)
Frame = +1
Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 732
AV ITA A AIT+LLTDRNLNTSF++ AGGGD ILYQHLF FFGHPEVYIL
Sbjct: 214 AVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFWFFGHPEVYIL 273
Query: 733 ILPGFGIISHXISQERGK 786
I+PGFGIIS IS K
Sbjct: 274 IIPGFGIISTVISANSNK 291
Score = 99 bits (238), Expect = 6e-20
Identities = 50/121 (41%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Frame = +3
Query: 105 RAELGNPG-SLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 281
R EL PG I Q+YN+I+T+H N L+P+++G PD+AFPR
Sbjct: 64 RLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVMPALIGGFGNFLLPILIGGPDMAFPR 123
Query: 282 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 461
+NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+GIS
Sbjct: 124 LNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGIS 183
Query: 462 S 464
S
Sbjct: 184 S 184
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 104 bits (250), Expect = 2e-21
Identities = 61/150 (40%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL PG L G Q++N +V HA N ++PL++GA D AFP
Sbjct: 37 RLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMVMPALIGGFGNYMLPLMIGATDTAFP 96
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
RINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+ I
Sbjct: 97 RINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSI 156
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
SS + +LPLFV
Sbjct: 157 SSLLGAINFIVTTLNMRTNGMTMHKLPLFV 186
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/58 (53%), Positives = 37/58 (63%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 711
P A+ ITA + +T+LL DRN NTSFF+ AGGGDPILY+HLF FFG
Sbjct: 183 PLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFWFFG 240
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 103 bits (247), Expect = 5e-21
Identities = 49/78 (62%), Positives = 56/78 (71%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P +V +TAF A AIT+LLTDRN T+F+D AGGGDP LYQHLF FFGHP
Sbjct: 225 PLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFGHP 284
Query: 718 EVYILILPGFGIISHXIS 771
EVYI+ILPGFGIIS +S
Sbjct: 285 EVYIMILPGFGIISQIVS 302
Score = 84.2 bits (199), Expect = 3e-15
Identities = 52/150 (34%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Frame = +3
Query: 117 GNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 296
G +L A ++N ++TAH N VP+++GAPD+AFPR+NNI
Sbjct: 82 GPSATLDQAYHLWNVLITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPRMNNIS 141
Query: 297 FXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
F V NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 142 FWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
+ ++PLFV S
Sbjct: 201 ILGAINFITTILNMRAPGMTLHKMPLFVWS 230
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 101 bits (242), Expect = 2e-20
Identities = 56/125 (44%), Positives = 70/125 (56%), Gaps = 5/125 (4%)
Frame = +3
Query: 105 RAELGNPG-SLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 281
R EL PG I Q+YN+I+TAHA N L+PL++G PD+AFPR
Sbjct: 66 RLELSGPGVQFIANNQLYNSIITAHAILMIFFMVMPALIGGFGNFLMPLMIGGPDMAFPR 125
Query: 282 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSLHL 449
+NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+LHL
Sbjct: 126 LNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHL 185
Query: 450 AGISS 464
+G+SS
Sbjct: 186 SGVSS 190
Score = 100 bits (239), Expect = 5e-20
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +1
Query: 610 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXISQERGK 786
IT++LTDRN NTSFF+ AGGGDPIL+QHLF FFGHPEVYILI+PGFGIIS IS K
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPILFQHLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 101 bits (241), Expect = 3e-20
Identities = 59/149 (39%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL N GS L G Q +N ++TAHA N L+PL+LGA D+AF
Sbjct: 42 RLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFA 101
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G
Sbjct: 102 RLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGF 161
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
SS ++ +PLF
Sbjct: 162 SSLLGAINFITTFINMRTIGMKYENVPLF 190
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/69 (47%), Positives = 41/69 (59%)
Frame = +1
Query: 532 NYPYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 711
N P AV TA A +T+ + DRN NTSFF+ AGGGD +LYQHLF ++
Sbjct: 186 NVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFYWWN 245
Query: 712 HPEVYILIL 738
HPEV I+ L
Sbjct: 246 HPEVKIICL 254
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 100 bits (239), Expect = 5e-20
Identities = 52/145 (35%), Positives = 74/145 (51%)
Frame = +3
Query: 120 NPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 299
NP L+ Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 300 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 479
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 480 XXXXXXXXXXXXXXSFDQLPLFVLS 554
+ +LPLFV S
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWS 205
Score = 89.4 bits (212), Expect = 9e-17
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHP
Sbjct: 200 PLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHP 259
Query: 718 EVYILILPGFGIISHXI 768
EVYILI+P FG++S +
Sbjct: 260 EVYILIVPVFGVVSQIV 276
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 100 bits (239), Expect = 5e-20
Identities = 52/145 (35%), Positives = 74/145 (51%)
Frame = +3
Query: 120 NPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 299
NP L+ Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 300 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 479
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 480 XXXXXXXXXXXXXXSFDQLPLFVLS 554
+ +LPLFV S
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWS 205
Score = 89.4 bits (212), Expect = 9e-17
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFGHP
Sbjct: 200 PLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFGHP 259
Query: 718 EVYILILPGFGIISHXI 768
EVYILI+P FG++S +
Sbjct: 260 EVYILIVPVFGVVSQIV 276
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 100 bits (239), Expect = 5e-20
Identities = 52/145 (35%), Positives = 74/145 (51%)
Frame = +3
Query: 120 NPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 299
NP L+ Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 300 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 479
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 480 XXXXXXXXXXXXXXSFDQLPLFVLS 554
+ +LPLFV S
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWS 205
Score = 62.9 bits (146), Expect = 9e-09
Identities = 35/84 (41%), Positives = 50/84 (59%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+F FFG
Sbjct: 200 PLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFWFFG-- 257
Query: 718 EVYILILPGFGIISHXISQERGKK 789
+++ +I+ II++ I + KK
Sbjct: 258 QIWPIIIIIIIIINYAICGKDFKK 281
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 100 bits (239), Expect = 5e-20
Identities = 52/145 (35%), Positives = 74/145 (51%)
Frame = +3
Query: 120 NPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF 299
NP L+ Q++N ++TAHA N LVPL +G+ D AFPRINN+ F
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPRINNLAF 120
Query: 300 XXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXX 479
+++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G+SS
Sbjct: 121 VVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAI 180
Query: 480 XXXXXXXXXXXXXXSFDQLPLFVLS 554
+ +LPLFV S
Sbjct: 181 NLMVTIINMRANGMDYSKLPLFVWS 205
Score = 55.2 bits (127), Expect = 2e-06
Identities = 33/72 (45%), Positives = 42/72 (58%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P +V ITA A +T+LL DRN NTSFF +GGGDP+LY+H+ F+ +P
Sbjct: 200 PLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI--FYKNP 257
Query: 718 EVYILILPGFGI 753
V ILI GI
Sbjct: 258 -VLILIWLTSGI 268
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 98.3 bits (234), Expect = 2e-19
Identities = 41/54 (75%), Positives = 48/54 (88%)
Frame = +1
Query: 601 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISH 762
A IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGHPEVY+LILPGFGI+SH
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGHPEVYVLILPGFGIVSH 346
Score = 50.8 bits (116), Expect = 4e-05
Identities = 36/120 (30%), Positives = 50/120 (41%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R L +P + + +YN +VT H N +P+ L D+ PR+
Sbjct: 136 RLNLCDPYYNLVSVDVYNYLVTNHGVAMIFFFLMPILIGGFGNYFLPIFLCLDDLLLPRL 195
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N++ G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 196 NSLSLWLMVPSIFYMELSLYY--GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 93.5 bits (222), Expect = 6e-18
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = +1
Query: 601 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXISQER 780
A +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFGHPEVYILILP FG+ISH + +
Sbjct: 206 AAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFGHPEVYILILPAFGVISHILCRSS 265
Query: 781 GK 786
K
Sbjct: 266 AK 267
Score = 77.0 bits (181), Expect = 5e-13
Identities = 39/120 (32%), Positives = 60/120 (50%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R EL +PG + +Y++I+T HA N +PL++ D++ PR+
Sbjct: 40 RIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMPTSIGGLGNWFIPLMIKIKDLSMPRL 99
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG+SS
Sbjct: 100 NNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSS 159
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 92.7 bits (220), Expect = 1e-17
Identities = 66/184 (35%), Positives = 77/184 (41%), Gaps = 1/184 (0%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R ELG PGSL+ Q+YN +VTAH N LVPL+LGAPD+AFPR+
Sbjct: 22 RTELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRM 81
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN+ F + G + PL G SVDLAIF LHLAG+SS
Sbjct: 82 NNMSFGFFPLHWHYYSFFTV--KGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSS 139
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFVLSCRDYSXXXXXXTTCFSWSYYNIINRS-KLK 641
S L Y TC S SYY IIN L
Sbjct: 140 ILGSYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLH 199
Query: 642 YIIF 653
YII+
Sbjct: 200 YIIW 203
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 91.5 bits (217), Expect = 2e-17
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +1
Query: 604 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXIS 771
G + +LL+D + NT FFDP GDPILYQHLF FFGHPEVYILILP FG+ISH IS
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFGHPEVYILILPAFGVISHVIS 265
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +3
Query: 150 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXX 329
+YN I T H N +P++ G+P++A+PRIN+I
Sbjct: 58 LYNMIFTIHGIIMIFFNIMPGLFGGFGNYFLPILCGSPELAYPRINSISLLLQPIAFVLV 117
Query: 330 XXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLAGISS 464
E G GTG T+YPPLS+++ +VD+ IF L ++G++S
Sbjct: 118 ILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVAS 163
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 91.1 bits (216), Expect = 3e-17
Identities = 40/53 (75%), Positives = 45/53 (84%)
Frame = +1
Query: 634 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXISQERGKKE 792
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILPGFG+ISH I+ GK+E
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKRE 243
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 89.4 bits (212), Expect = 9e-17
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +1
Query: 562 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 741
+T+F AG++ LL DRN NTSF+D GG+P+LYQHLF FFGHPEVY++ILP
Sbjct: 200 LTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWFFGHPEVYVIILP 259
Query: 742 GFGIISHXI 768
FGIIS +
Sbjct: 260 VFGIISEAV 268
Score = 75.4 bits (177), Expect = 2e-12
Identities = 44/150 (29%), Positives = 63/150 (42%), Gaps = 2/150 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL +PG G+ Q+YN+++T H N ++PL+LGAP++AFP
Sbjct: 47 RFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLVMPILIGGFGNWMLPLMLGAPEMAFP 106
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
R+N + F + G G+ T YPPLS S+D I LH GI
Sbjct: 107 RVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGI 165
Query: 459 SSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
S + DQ+ +FV
Sbjct: 166 GSLLGAINFMVTTQNMRSTAVTLDQISMFV 195
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 88.6 bits (210), Expect = 2e-16
Identities = 39/66 (59%), Positives = 48/66 (72%)
Frame = +1
Query: 562 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 741
ITA AG +T++L DRN NTSF+D GGGD IL+QH+F FFGHPEVYI++LP
Sbjct: 193 ITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFWFFGHPEVYIILLP 252
Query: 742 GFGIIS 759
FG+IS
Sbjct: 253 VFGLIS 258
Score = 70.9 bits (166), Expect = 3e-11
Identities = 36/113 (31%), Positives = 51/113 (45%)
Frame = +3
Query: 126 GSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 305
G L G Q YN ++T+H N +P++ G PD+ FPR+NN+ F
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPRLNNMSFWM 107
Query: 306 XXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
+ E G G G T+YP L H + D +F++HL GISS
Sbjct: 108 YLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISS 160
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 87.4 bits (207), Expect = 4e-16
Identities = 48/96 (50%), Positives = 56/96 (58%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
RAELG PG+L+G Q N IVTAHA N LVPL++GAPD+AFPR+
Sbjct: 39 RAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMPIMIGGFGNWLVPLMIGAPDMAFPRM 98
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 392
NN+ F VE GAGTG TVYPPL+
Sbjct: 99 NNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 84.6 bits (200), Expect = 3e-15
Identities = 48/101 (47%), Positives = 55/101 (54%)
Frame = +3
Query: 246 LILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVD 425
L LGAPD FPR N+ F VE GAGTG TV PPLS+NIAH G SVD
Sbjct: 4 LXLGAPDXXFPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVD 63
Query: 426 LAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
LAIFSLH+AG+ S + ++PLFV
Sbjct: 64 LAIFSLHMAGVXSILGAINFISTVLNMRPSGMTPXRMPLFV 104
Score = 82.6 bits (195), Expect = 1e-14
Identities = 40/59 (67%), Positives = 42/59 (71%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 714
P AV ITA AGAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F GH
Sbjct: 101 PLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWFXGH 159
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 82.6 bits (195), Expect = 1e-14
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = +1
Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 732
++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGHPEVYI+
Sbjct: 193 SIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGHPEVYIM 252
Query: 733 ILPGFGIISHXIS 771
ILPGFGIIS +S
Sbjct: 253 ILPGFGIISLLLS 265
Score = 60.5 bits (140), Expect = 5e-08
Identities = 34/106 (32%), Positives = 51/106 (48%)
Frame = +3
Query: 147 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 326
+IYN + T H N L P++LG D+ +PR+N
Sbjct: 60 EIYNLLFTLHGLIMVFFNIMTGLFGGIGNYLYPVLLGYCDVVYPRVNLYSLLFQPIGFVL 119
Query: 327 XXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 120 VVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 82.2 bits (194), Expect = 1e-14
Identities = 35/56 (62%), Positives = 44/56 (78%)
Frame = +1
Query: 601 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
A IT++LTD++L T F+D GGDP+LYQHLF FFGHPEVY++ILP FG+ S I
Sbjct: 187 AVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHPEVYVVILPVFGLFSSSI 242
Score = 55.2 bits (127), Expect = 2e-06
Identities = 39/120 (32%), Positives = 52/120 (43%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R +L P L +YN VT H N L+P PD+ FPR+
Sbjct: 35 RLQLAFPSIL--TSDVYNAFVTLHGLVMVFFAAMPTAIGFFANLLIPYHCNLPDLLFPRM 92
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N + F ++ + A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 93 NALSF-----WLMPFSLSLLLFSMASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 79.4 bits (187), Expect = 1e-13
Identities = 37/54 (68%), Positives = 38/54 (70%)
Frame = +3
Query: 633 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTRIWYNFSYXFTRKRKKRN 794
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSY F K KK N
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGN 60
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 76.6 bits (180), Expect = 7e-13
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILILPGFG+IS I
Sbjct: 224 ALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILILPGFGMISEVI 277
Score = 52.8 bits (121), Expect = 1e-05
Identities = 37/148 (25%), Positives = 55/148 (37%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R +L P + + +++N + T H N VPL++GA D+AFPR+
Sbjct: 58 RIQLAFPNNTFLSPEMFNQLFTMHGTTMVFLVGMPVLTGFA-NYFVPLMIGARDVAFPRL 116
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N+ F + + G Y PLSS + VD I L + GI S
Sbjct: 117 NSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWIIGLLIMGIGS 176
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
S ++PLFV
Sbjct: 177 VSGAINIFATIINLRAPGMSLQRVPLFV 204
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 76.6 bits (180), Expect = 7e-13
Identities = 35/61 (57%), Positives = 45/61 (73%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXISQERGK 786
A+ +LL DRN T+FF AGG DPI +QHLF FFGHPEVY+L+LP GI+S + + G+
Sbjct: 260 ALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHPEVYVLVLPPMGIVSLILPKFSGR 318
Query: 787 K 789
K
Sbjct: 319 K 319
Score = 50.0 bits (114), Expect = 7e-05
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R EL + + +YN ++T+H N +PL++ A D+AFPRI
Sbjct: 94 RTELATSSETLISPSLYNGLLTSHGITMLFLFGTPMIAAFG-NYFIPLLIDADDMAFPRI 152
Query: 285 NNIRFXXXXXXXXXXXXXXIVEN--GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGI 458
N I F ++ A T T+Y PLS ++ +VD+ + LHL G+
Sbjct: 153 NAIAFWLLPPGAILIWSGFLIPGIATAQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGV 210
Query: 459 SS 464
S+
Sbjct: 211 SA 212
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 76.2 bits (179), Expect = 9e-13
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +1
Query: 601 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
A A+ +L D TSFF+P GGGDP++YQHLF F+ HP VYI+ILP FG+IS I
Sbjct: 214 ASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVYIMILPFFGVISEVI 269
Score = 48.0 bits (109), Expect = 3e-04
Identities = 40/147 (27%), Positives = 52/147 (35%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R EL P ++YN ++T H N L+PL++G D+AFPR+
Sbjct: 53 RTELATPSPDFVQPEMYNQLMTLHGTIMIFLWIVPAGAAFA-NYLIPLMVGTEDMAFPRL 111
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N + F V G T YPPLS G +L I SL L G SS
Sbjct: 112 NAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWILSLLLVGTSS 168
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLF 545
+PLF
Sbjct: 169 ILGAINFVTTILKMRIKDMDLHSMPLF 195
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 74.1 bits (174), Expect = 4e-12
Identities = 48/120 (40%), Positives = 56/120 (46%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R L G +IG QI VTA A L PL +GAP +A PR+
Sbjct: 28 RXXLSXXGQVIGXGQIXXVGVTAXALVMIFFFVMPTLXGGFGXXLXPLXVGAPXMAXPRL 87
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N+ F + G G VYPP SS +AH +VDL IF LHLAGISS
Sbjct: 88 XNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISS 147
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 74.1 bits (174), Expect = 4e-12
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXISQERGK 786
AI +LL DRN TSFF AG G IL+QHLF FFGHPEVYI++LP GIIS+ + + G+
Sbjct: 292 AIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFFGHPEVYIIVLPPMGIISYILPRFSGR 349
Query: 787 K 789
+
Sbjct: 350 R 350
Score = 59.7 bits (138), Expect = 8e-08
Identities = 45/128 (35%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R EL +PG + + YN+++T+H N L+PL++GA D+AFPRI
Sbjct: 120 RIELADPGMTVISNTFYNSLLTSHGITMLFLFATPIIAAFS-NYLIPLLIGADDMAFPRI 178
Query: 285 NNIRFXXX--XXXXXXXXXXXIVE-NGAGTG*TVYPPLS-----SNIAHRGRSVDLAIFS 440
N I F I E A TG T+Y PLS N A+ G VDL +
Sbjct: 179 NAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG--VDLMLLG 236
Query: 441 LHLAGISS 464
LHL+G+S+
Sbjct: 237 LHLSGVSA 244
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 73.7 bits (173), Expect = 5e-12
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +1
Query: 601 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
AGA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+ +LP FG S I
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQVLPVFGFYSEII 214
Score = 53.2 bits (122), Expect = 7e-06
Identities = 38/142 (26%), Positives = 54/142 (38%)
Frame = +3
Query: 123 PGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFX 302
PG + + YN ++T H N L+PL++GA D+AFPR+N + +
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPRLNALSWW 61
Query: 303 XXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 482
I N T T YPP S N + L +F +HL G SS
Sbjct: 62 AFFAANVLFLMTLIPGNHIMTMWTGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVN 119
Query: 483 XXXXXXXXXXXXXSFDQLPLFV 548
+F + LFV
Sbjct: 120 FLVTYITMRAPGYTFFKTNLFV 141
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 72.9 bits (171), Expect = 8e-12
Identities = 33/70 (47%), Positives = 45/70 (64%)
Frame = +1
Query: 562 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 741
+T+F A T L+ DR + T FF+PA GGD +L+QHLF FFGHPEVYI+ LP
Sbjct: 206 VTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWFFGHPEVYIIFLP 265
Query: 742 GFGIISHXIS 771
G++S ++
Sbjct: 266 AVGMVSSIVA 275
Score = 44.4 bits (100), Expect = 0.003
Identities = 36/150 (24%), Positives = 50/150 (33%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R +L P + YN I T H LVPL++G IAFPR+
Sbjct: 55 RLQLAQPEARFIGPDRYNQIFTMHGSNMMFLFAVPVMQAMAIY-LVPLMVGTRHIAFPRL 113
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N + V+ G G Y PLS G+ D+ + +S+
Sbjct: 114 NAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSA 173
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
S D++PLFV S
Sbjct: 174 LAIAVEIVVTVFKQRAPGMSLDRIPLFVWS 203
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 72.9 bits (171), Expect = 8e-12
Identities = 33/51 (64%), Positives = 41/51 (80%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
AIT LL DRN+N++ +D G DP+LYQHLF FFGHPEVY++ILP FG+ S
Sbjct: 217 AITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPEVYVIILPVFGLTS 265
Score = 52.4 bits (120), Expect = 1e-05
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 150 IYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRF-XXXXXXXXX 326
IYN +T H N L+P+++G +++ PR+N I F
Sbjct: 63 IYNNWITIHGLIMLFVFIMPVGIGFYGNYLIPMLIGTSELSMPRMNGISFWMLIVGVVIF 122
Query: 327 XXXXXIVENGAGTG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 464
++ +G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 123 VISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 72.9 bits (171), Expect = 8e-12
Identities = 33/84 (39%), Positives = 50/84 (59%)
Frame = +1
Query: 538 PYLY*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 717
P++ ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 718 EVYILILPGFGIISHXISQERGKK 789
EVY+LI+P FG I+ + ++
Sbjct: 403 EVYVLIIPTFGFINMIVPHNNTRR 426
Score = 36.3 bits (80), Expect = 0.89
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 105 RAELGNPGSLI--GAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL +P S G Y +VTAH N L+P +G+ D+A+P
Sbjct: 86 RMELAHPESPFFKGDSLRYLQVVTAHGLIMVFFVVVPILFGGFANFLIPYHVGSKDVAYP 145
Query: 279 RINNIRF 299
R+N+I F
Sbjct: 146 RLNSIGF 152
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 72.5 bits (170), Expect = 1e-11
Identities = 30/52 (57%), Positives = 37/52 (71%)
Frame = +1
Query: 604 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
G +LL D + TSFF P GGGDP+L+QH F F+ HP VY+L+LP FGI S
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYSHPAVYVLVLPVFGIFS 281
Score = 47.6 bits (108), Expect = 4e-04
Identities = 39/151 (25%), Positives = 59/151 (39%), Gaps = 3/151 (1%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R EL P + + +YN + T H N L+P ++GAPD+AFP++
Sbjct: 62 RGELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPKL 120
Query: 285 NNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVDLAIFSLHLAG 455
N F G A +G YPP+S + + H L I ++ L+G
Sbjct: 121 NAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSG 180
Query: 456 ISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
ISS F ++P+FV
Sbjct: 181 ISSIMGAINFVTTIIRMRAPGMGFFRMPVFV 211
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 70.9 bits (166), Expect = 3e-11
Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 5/63 (7%)
Frame = +1
Query: 601 AGAITILLTDRNLNTSFF-----DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHX 765
AGAI +LL +R+L FF DPA GDP L+QH+F FFGHPEVYIL+LP G++S
Sbjct: 209 AGAIMLLL-ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFFGHPEVYILVLPAMGLVSEV 267
Query: 766 ISQ 774
I +
Sbjct: 268 IQR 270
Score = 47.6 bits (108), Expect = 4e-04
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +3
Query: 231 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAH 407
N LVP ++GAPD+ +PRIN + F + ++G G T+YPPLS+
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLST--IS 143
Query: 408 RGRSVDLAIFSLHLAGISS 464
+ VDL + + +AG SS
Sbjct: 144 KSIGVDLILLGIIIAGFSS 162
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 70.5 bits (165), Expect = 4e-11
Identities = 29/57 (50%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Frame = +1
Query: 604 GAITILLTDRNL-NTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXIS 771
G + +L+T NL FDPA GGDP+L+QHLF F+ HP VYI++LP FG++S ++
Sbjct: 229 GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLFWFYSHPAVYIMVLPSFGVMSEVVA 285
Score = 53.2 bits (122), Expect = 7e-06
Identities = 40/148 (27%), Positives = 55/148 (37%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R EL PG I YN T H N ++PL+LGA D+AFPR+
Sbjct: 68 RVELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPRL 127
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N + ++ G TG T Y P S AH +V +F + G SS
Sbjct: 128 NLLSL-YIYLAGAVLALWGMLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSS 183
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
++ ++PLFV
Sbjct: 184 IVTGINFIVTCHTMRAPGITWFKMPLFV 211
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +1
Query: 619 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
LL DR+ T FF P GGD +L+QHLF FFGHPEVYILILP GIIS +
Sbjct: 227 LLFDRHFGTRFFLPNLGGDAVLWQHLFWFFGHPEVYILILPTMGIISEVL 276
Score = 48.4 bits (110), Expect = 2e-04
Identities = 35/148 (23%), Positives = 53/148 (35%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R +LG P + +YN + T H N +VPL++GA D+AFPR+
Sbjct: 57 RIQLGVPDNTFLTPDVYNQMFTMHGTTMIFLGLMPLNVGLG-NYMVPLMIGARDMAFPRL 115
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N + V G Y PL+ VD I + L G++S
Sbjct: 116 NALSIWLFIFGGLMLYVSFFVGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVAS 175
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
+ +++PLFV
Sbjct: 176 IAGALNFIVTILNMRAPGMTLNRMPLFV 203
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 70.5 bits (165), Expect = 4e-11
Identities = 43/101 (42%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL PG L G Q+YN I+TAHA N LVP+++GAPD+AFP
Sbjct: 36 RMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFP 95
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 401
R+NNI F VE GAGTG TV LS I
Sbjct: 96 RLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 69.7 bits (163), Expect = 8e-11
Identities = 37/67 (55%), Positives = 42/67 (62%), Gaps = 10/67 (14%)
Frame = +1
Query: 616 ILLTDRNLNTSFFDPA----------GGGDPILYQHLF*FFGHPEVYILILPGFGIISHX 765
+LL DR L TSFF P GGG P+L+QHLF FFGHPEVYI+ LP FGI+S
Sbjct: 238 MLLLDRLLGTSFFMPTLVEMGQLSKYGGGSPLLFQHLFWFFGHPEVYIVALPAFGIVSDL 297
Query: 766 ISQERGK 786
IS K
Sbjct: 298 ISTHARK 304
Score = 44.8 bits (101), Expect = 0.003
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Frame = +3
Query: 105 RAELGNPG--SLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R +LG PG S I A Q Y +T H N L+PL++GA D+ FP
Sbjct: 64 RLQLGFPGTFSFIDANQ-YLQFITMHGMIMVIYLLTALFLGGFGNYLIPLMVGARDMVFP 122
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPP 386
+N + + V G G G T+YPP
Sbjct: 123 YVNMLSYWVYLLAVLVLASAFFVPGGPTGAGWTLYPP 159
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/75 (46%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Frame = +1
Query: 562 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF*FFGHPEVY 726
+TA A +LL DR+ T FF GGGDPIL+QHLF FGHPEVY
Sbjct: 223 LTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFWIFGHPEVY 282
Query: 727 ILILPGFGIISHXIS 771
I+ILP +GI+ +S
Sbjct: 283 IMILPAWGILGDVLS 297
Score = 56.8 bits (131), Expect = 6e-07
Identities = 35/133 (26%), Positives = 51/133 (38%), Gaps = 1/133 (0%)
Frame = +3
Query: 153 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 332
Y I T H N L+PL++GA D+AFPR+N F
Sbjct: 86 YQQIFTTHGLVMIFFAVTPVLIGTFGNLLIPLMIGARDMAFPRLNMYSFWTFLLSQLLVL 145
Query: 333 XXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXX 509
G AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 146 ASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLR 205
Query: 510 XXXXSFDQLPLFV 548
++ +LPL +
Sbjct: 206 APGMTYMRLPLTI 218
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 68.5 bits (160), Expect = 2e-10
Identities = 28/53 (52%), Positives = 39/53 (73%)
Frame = +1
Query: 610 ITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
+ +++ DR T+FF+P GG+ ++++HLF FGHPEVYILILP FGI S I
Sbjct: 215 LALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVYILILPAFGIFSEVI 267
Score = 46.4 bits (105), Expect = 8e-04
Identities = 32/147 (21%), Positives = 55/147 (37%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R +L P + + Q YN ++T H N +VPL +GA D++FP +
Sbjct: 50 RIQLAKPENAFLSAQAYNEVMTMHGTTMIFLAAMPLLFALM-NAVVPLQIGARDVSFPFL 108
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N + F + G T Y LS + +G +D + L ++G+ +
Sbjct: 109 NALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVLGLQISGLGT 166
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLF 545
++ +LPLF
Sbjct: 167 LIAGINFLATIINMRAPGMTYMRLPLF 193
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 66.1 bits (154), Expect = 1e-09
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Frame = +1
Query: 616 ILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXISQERGK 786
+LL DRNL T FF +PAGG +L+ HLF FFGHPEVYIL+ P G ++ IS GK
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEVYILLFPALGAMADVISTFSGK 272
Score = 50.8 bits (116), Expect = 4e-05
Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 1/151 (0%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R +L P S Y VT H N +VPL +GA D+AFPR+
Sbjct: 47 RVQLAIPKSNFLTGDAYYEAVTVHGLIMLLWFASPFAFGLA-NYIVPLQIGARDLAFPRL 105
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 461
N + + E+GA G T+Y PL++ I G +DLA ++ L +S
Sbjct: 106 NALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAALAIFLFSLS 165
Query: 462 SXXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
+ ++P+F S
Sbjct: 166 VTLGTINFLVTIAAMRAPGIGWFKMPMFTWS 196
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/54 (55%), Positives = 36/54 (66%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
A+ +L+ DR +FF+ GG + YQHLF FGHPEVYILILP GIIS I
Sbjct: 225 ALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFGHPEVYILILPAMGIISEVI 278
Score = 37.9 bits (84), Expect = 0.29
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R +L PG + + +N + T HA N +PL++GA D+AFPR+
Sbjct: 55 RLQLARPGLEVVTARTFNALFTMHATTMIFLGVMPLLSAFM-NYFLPLMIGARDVAFPRL 113
Query: 285 N 287
N
Sbjct: 114 N 114
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
A +L DRN T FFD A GG P+L+QHLF F HP VY+++LP GI+S +
Sbjct: 241 AFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVLPAMGIVSDAL 294
Score = 39.9 bits (89), Expect = 0.072
Identities = 33/148 (22%), Positives = 53/148 (35%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R +L P + + Y+++ T H N L PL+LG+ D+AFPR+
Sbjct: 75 RIQLARPNATVLTPAQYDSLFTMHGVTMIFLYALPVLSGFA-NYLWPLMLGSRDMAFPRL 133
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
+ + G Y PL+S G ++D+ + L GIS+
Sbjct: 134 TAFSYWSFLFAGLFLYASFPLGAVPDGGWFNYVPLTSLDYSAGANIDIYGLGMILLGIST 193
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
S D+LP+ V
Sbjct: 194 TGGAANFVVTLLRMRAHGMSIDRLPIIV 221
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/52 (55%), Positives = 38/52 (73%)
Frame = +1
Query: 601 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGII 756
A A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P G++
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIPAIGMM 256
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 65.3 bits (152), Expect = 2e-09
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +3
Query: 105 RAELGNPGSLI--GAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL PG+ I G Q+YN ++TAHA N VP+++G+PD+AFP
Sbjct: 40 RMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMVMPAMIGGFGNWFVPILIGSPDMAFP 99
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 377
R+NNI F +VE G G+G TV
Sbjct: 100 RLNNISFWLLPPSLLLLLSSALVEVGCGSGWTV 132
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/50 (60%), Positives = 36/50 (72%)
Frame = +1
Query: 619 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
+L DR L +DPA GG +L+QHLF FFGHPEVY+L LP FGI+S I
Sbjct: 235 VLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHPEVYVLALPFFGIVSEII 283
Score = 53.6 bits (123), Expect = 5e-06
Identities = 39/148 (26%), Positives = 56/148 (37%), Gaps = 1/148 (0%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
RAEL PG + + +N + T H N ++PL +GAPD+AFPR+
Sbjct: 64 RAELFTPGLQFLSNEQFNQLFTMHGTVMLLLYGTPIVWGFA-NYVLPLQIGAPDVAFPRL 122
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGT-G*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 461
N F + GA G T+Y PLS I G D+ I + GI
Sbjct: 123 NAFGFWITTVGGVAMLTGFLTPGGAADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIG 182
Query: 462 SXXXXXXXXXXXXXXXXXXXSFDQLPLF 545
S + ++P+F
Sbjct: 183 SVASAINMLTTILCLRAPGMTMFRMPIF 210
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/56 (55%), Positives = 38/56 (67%)
Frame = +1
Query: 601 AGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
AG + L +R T FFD A GG P+L+Q LF FFGHPEVYILILP G++S +
Sbjct: 202 AGLVFAYL-ERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYILILPAMGLVSELL 256
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/62 (48%), Positives = 41/62 (66%)
Frame = +1
Query: 604 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXISQERG 783
GA+ +L DR L+ FF GG+ ++Y +LF +GHPEVYIL+LP FGI S +S G
Sbjct: 249 GALAMLALDRYLDFHFFTAELGGNAMMYLNLFWAWGHPEVYILVLPAFGIFSEVVSTFAG 308
Query: 784 KK 789
K+
Sbjct: 309 KR 310
Score = 48.8 bits (111), Expect = 2e-04
Identities = 35/135 (25%), Positives = 51/135 (37%)
Frame = +3
Query: 153 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 332
Y+ I TAH N +VPL +GA D+AFP +N++ F
Sbjct: 100 YDQIFTAHGVIMIIFMAMPFMTGLM-NIVVPLQIGARDVAFPFLNSLSFWLLVSAVILVN 158
Query: 333 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 512
V N A TG YPPL+ VD I++L ++GI +
Sbjct: 159 LSLGVGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRA 218
Query: 513 XXXSFDQLPLFVLSC 557
+P+F +C
Sbjct: 219 PGMKLMDMPIFTWTC 233
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 64.5 bits (150), Expect = 3e-09
Identities = 40/101 (39%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL N GS L G Q +N ++TAHA N L+PL+LGA D+AF
Sbjct: 42 RLELANTGSPFLHGNTQAFNVVITAHAILMIFFFVMPALVGGFGNYLMPLMLGASDMAFA 101
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 401
R+NNI F +VE GAGTG TV SS +
Sbjct: 102 RLNNISFWLLVPSLILILTSALVEAGAGTGWTVKKICSSKM 142
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 63.3 bits (147), Expect = 7e-09
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+ LP G++S
Sbjct: 231 ATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIFLPAAGLVS 281
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 62.5 bits (145), Expect = 1e-08
Identities = 33/65 (50%), Positives = 39/65 (60%), Gaps = 11/65 (16%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAG-----------GGDPILYQHLF*FFGHPEVYILILPGFGI 753
A +L DR TSFF P+G GG +L+QHLF FFGHPEVYI ILP GI
Sbjct: 242 ACILLCLDRVAGTSFFIPSGLVFNDHVIPHGGGSALLWQHLFWFFGHPEVYIAILPAMGI 301
Query: 754 ISHXI 768
+SH +
Sbjct: 302 VSHIL 306
Score = 36.3 bits (80), Expect = 0.89
Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Frame = +3
Query: 117 GNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIR 296
G PG ++ + Y +++T H N +P+ +GA D+AFPR N +
Sbjct: 75 GAPGDVM-TPEYYLSLLTMHGTLMVFFVLTNAPFAAFGNYFLPIQIGAEDMAFPRFNMMS 133
Query: 297 FXXXXXXXXXXXXXXIVENGAG-TG*TVYPPLSS 395
F + +G +G T Y LS+
Sbjct: 134 FWTTFAAFCVLIAAFFIPDGPPISGWTAYATLSA 167
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXISQERGK 786
+L +R L FFD GGDP+L+QHLF FGHPEVYI+ LP G+++ + GK
Sbjct: 250 LLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIFLPAAGMVATMLPTFVGK 306
Score = 41.1 bits (92), Expect = 0.031
Identities = 30/148 (20%), Positives = 53/148 (35%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R +L P + + + YN + T H L+PL++GA D+ FPR+
Sbjct: 81 RLQLMVPENTFLSSETYNQLFTMHGTIMMFLFAIPMLEGFAVY-LIPLMIGARDLVFPRL 139
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
+ + + G +Y PLS++ G S D + + LA I+S
Sbjct: 140 GAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSADFWLIGITLAEIAS 199
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
S ++P+ +
Sbjct: 200 VTAAVEIIAAILCSRAPGMSLTKMPILM 227
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXISQERGK 786
A+ +L DR L+ F GG+P++Y +LF +GHPEVYILILP FG+ S S GK
Sbjct: 249 ALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGK 308
Query: 787 K 789
+
Sbjct: 309 R 309
Score = 48.4 bits (110), Expect = 2e-04
Identities = 35/135 (25%), Positives = 50/135 (37%)
Frame = +3
Query: 153 YNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXX 332
Y+ I TAH N VPL +GA D+AFP +N++ F
Sbjct: 99 YDQIFTAHGVIMIIFMAMPFFTGLM-NLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVN 157
Query: 333 XXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXX 512
V A TG YPPL+ G VD I++L L+G+ +
Sbjct: 158 ISLGVGEFAKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRA 217
Query: 513 XXXSFDQLPLFVLSC 557
+P+F +C
Sbjct: 218 PGMKLMDMPIFTWTC 232
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 61.3 bits (142), Expect = 3e-08
Identities = 29/54 (53%), Positives = 35/54 (64%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +P G++S I
Sbjct: 228 ASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFIPALGMVSSII 280
Score = 35.5 bits (78), Expect = 1.5
Identities = 22/104 (21%), Positives = 38/104 (36%)
Frame = +3
Query: 237 LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR 416
++PL+LG D+ FPR+N + ++ G YPPL+ G
Sbjct: 105 IIPLMLGTRDMTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGL 164
Query: 417 SVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
+D + IS+ S +++P+FV
Sbjct: 165 GLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFV 208
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 61.3 bits (142), Expect = 3e-08
Identities = 24/55 (43%), Positives = 38/55 (69%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXIS 771
A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY+++LP GI++ S
Sbjct: 215 ATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVYVMLLPYLGILAEVAS 269
Score = 49.2 bits (112), Expect = 1e-04
Identities = 38/151 (25%), Positives = 54/151 (35%), Gaps = 1/151 (0%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R +L P + + YN I+T H N +VPL+LGA D+A PR+
Sbjct: 50 RTQLAVPNNQFLTGEQYNQILTLHGATMLFFFIIQAGLTGFGNFVVPLMLGARDVALPRV 109
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 461
N + GA G T Y P S A VD + ++ L G S
Sbjct: 110 NAFSYWAFLGAIVLALMSYFFPGGAPSVGWTFYYPFS---AQSESGVDFYLAAILLLGFS 166
Query: 462 SXXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
S S ++P++V S
Sbjct: 167 SLLGNANFVATIYNLRAQGMSLWKMPIYVWS 197
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 60.9 bits (141), Expect = 4e-08
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP G++S
Sbjct: 290 ATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLPAAGMVS 340
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 60.5 bits (140), Expect = 5e-08
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
++ ++ + FDPA GGDP+L+QH F F+ HP VYI++LP +IS +
Sbjct: 224 SLLLVAVEHAFGWGIFDPARGGDPVLFQHFFWFYSHPAVYIMVLPAMAVISEVV 277
Score = 56.4 bits (130), Expect = 8e-07
Identities = 43/150 (28%), Positives = 58/150 (38%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R EL PG I YN + T H N L+P+++GA D+AFP++
Sbjct: 61 RLELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPKL 120
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
N + F +V+ GA TG T Y P S+ + V L F L G SS
Sbjct: 121 NLLSF-YVYLAGAVVALFGMVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFSS 176
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLFVLS 554
+ +LPLFV S
Sbjct: 177 ILTGLNFIVTTHTMRAPGMGWTRLPLFVWS 206
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 60.1 bits (139), Expect = 6e-08
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 628 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 741
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLP 291
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 60.1 bits (139), Expect = 6e-08
Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Frame = +1
Query: 562 ITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP----AG------GGDPILYQHLF*FFG 711
ITA A +L+ DR+L TSFF AG GG P+L+QHLF F G
Sbjct: 242 ITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHLFWFLG 301
Query: 712 HPEVYILILPGFGIISHXISQERGK 786
HPEVYI+++P GI S I+ K
Sbjct: 302 HPEVYIVLIPALGITSEVIATNARK 326
Score = 37.5 bits (83), Expect = 0.38
Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 4/138 (2%)
Frame = +3
Query: 147 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 326
+ Y +VT H N L+PL +GA D+A +N + +
Sbjct: 100 EFYLALVTMHGTIMVFFVLTAGLSGTFSNFLIPLQIGARDMASGFMNMLSYWFFFGSSVI 159
Query: 327 XXXXXIVENGAGTG-*TVYPPLSS---NIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXX 494
+E G +G +YPPLS+ ++ G + + + S+ L IS
Sbjct: 160 MFASIFLETGPASGSWVIYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITT 219
Query: 495 XXXXXXXXXSFDQLPLFV 548
SF +LPL +
Sbjct: 220 VINLRVKGMSFTRLPLTI 237
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 59.3 bits (137), Expect = 1e-07
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Frame = +1
Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDP-----------AGGGDPILYQHLF 699
A+ ITA A ++L DR + T FF P AGGG P+L+QHLF
Sbjct: 225 AMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLF 284
Query: 700 *FFGHPEVYILILPGFGIISHXIS 771
F+ HP VYI+ILP G++S ++
Sbjct: 285 WFYSHPAVYIMILPAMGMVSDILA 308
Score = 47.2 bits (107), Expect = 5e-04
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Frame = +3
Query: 141 AXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXX 320
A + Y +VT HA N L+PL++GA D+AFP +N + +
Sbjct: 84 APEFYTVLVTMHATVMIFLVIIPILAGAFGNFLIPLMIGADDMAFPTLNMLSYWFMWPAF 143
Query: 321 XXXXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAIFSLHLAGISS 464
+ +GA G T YPPLS ++ G + L + + G+SS
Sbjct: 144 FFFGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSS 195
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +3
Query: 342 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 58.8 bits (136), Expect = 1e-07
Identities = 23/55 (41%), Positives = 36/55 (65%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXIS 771
A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY++ LP ++ ++
Sbjct: 205 AVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYVIFLPFMAMVFEIVA 259
Score = 39.9 bits (89), Expect = 0.072
Identities = 35/149 (23%), Positives = 52/149 (34%), Gaps = 1/149 (0%)
Frame = +3
Query: 105 RAELGNPGSLIGAX-QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPR 281
R EL G I +YNT + H N +PL++GA D+AFPR
Sbjct: 40 RLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQIPALTGFFANYFIPLMIGAKDVAFPR 99
Query: 282 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 461
+N + + + T YPP S I H + FS+ L G +
Sbjct: 100 VNALSVWLFYAGVLVALTTFFIPDPPDIMWTGYPPYSI-ITHGNTA--FYTFSVLLLGFA 156
Query: 462 SXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
S +++L +FV
Sbjct: 157 SILGGVNFLTTVTFMRAPGIGWNKLNIFV 185
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/48 (54%), Positives = 32/48 (66%)
Frame = +1
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
+L +R + FF A GGD +L+QHLF FGHPEVYI+ LP G IS
Sbjct: 224 LLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEVYIIFLPAAGAIS 271
Score = 44.8 bits (101), Expect = 0.003
Identities = 33/147 (22%), Positives = 52/147 (35%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
RA+L P S + YN + T H L+P +LG+ D+AFPR+
Sbjct: 55 RAQLATPRSAFLGPEHYNQVFTMHGTIMMFLFAIPVFEGFAVY-LLPKLLGSRDLAFPRL 113
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
F + +G +YPPLSS + G + D + + IS+
Sbjct: 114 TAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWLIGITFVEISA 173
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLF 545
S ++P+F
Sbjct: 174 IAAAVEITVTVLRYRAPGMSLSKMPIF 200
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXIS 771
A+ +L DR FF GG P+L+ +LF +GHPEVYI+ILP FGI S IS
Sbjct: 245 ALALLSFDRLFGAHFFTLEAGGMPMLWANLFWIWGHPEVYIVILPAFGIFSEIIS 299
Score = 52.4 bits (120), Expect = 1e-05
Identities = 34/120 (28%), Positives = 48/120 (40%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
RA+L P + YN I T H N +VPL +GA D+AFP +
Sbjct: 79 RAQLALPNNSFLDSNHYNEIFTTHGTIMIIFMAMPFLIGLI-NVVVPLQIGARDVAFPYL 137
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
NN+ F ++ G T Y PL+SN G + + L +AGI +
Sbjct: 138 NNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGT 197
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 58.0 bits (134), Expect = 3e-07
Identities = 27/54 (50%), Positives = 35/54 (64%)
Frame = +1
Query: 607 AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXI 768
A+ +L DR L T FF GG+ +LY +LF +GHPEVY ++LP FG IS I
Sbjct: 268 ALAMLGADRYLGTHFFTAGLGGNLMLYTNLFWIWGHPEVYFVVLPAFGFISEII 321
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 57.6 bits (133), Expect = 3e-07
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3
Query: 105 RAELGNPGS--LIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFP 278
R EL PG+ L G Q++N +V HA N L+PL++GA D++F
Sbjct: 37 RLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLVMPALIGGFGNYLLPLMIGASDMSFA 96
Query: 279 RINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV 377
R+NNI F +VE+GAGTG TV
Sbjct: 97 RLNNISFWLLPPALVCLVTSTLVESGAGTGWTV 129
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/48 (54%), Positives = 31/48 (64%)
Frame = +1
Query: 616 ILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIIS 759
+L +R FF A GGD +L+QHLF FGHPEVYI+ LP G IS
Sbjct: 224 LLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEVYIIFLPAAGAIS 271
Score = 43.6 bits (98), Expect = 0.006
Identities = 30/147 (20%), Positives = 54/147 (36%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
RA+L +P S + Y + T H L+P +LG+ D+A+PR+
Sbjct: 55 RAQLASPRSAFVGAETYAQLFTMHGTIMMFLFAIPMFEGLTIY-LLPKMLGSRDLAYPRL 113
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 464
+ F + +G +YPPL+S + G + D + + IS+
Sbjct: 114 SAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWLLGITFVEISA 173
Query: 465 XXXXXXXXXXXXXXXXXXXSFDQLPLF 545
S D++P++
Sbjct: 174 IAAAVEIVVTVLRFRAPGMSLDRMPIY 200
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 56.8 bits (131), Expect = 6e-07
Identities = 27/51 (52%), Positives = 33/51 (64%)
Frame = +1
Query: 619 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXIS 771
+ DR L+T F+ GG +LY +L +GHPEVYILILP FGI S IS
Sbjct: 248 IFLDRTLSTHFYSSFYGGQQMLYINLIWAWGHPEVYILILPSFGIFSEIIS 298
Score = 46.8 bits (106), Expect = 6e-04
Identities = 27/109 (24%), Positives = 46/109 (42%)
Frame = +3
Query: 231 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 410
N ++PL +G+ D+AFP +N + F I+ A TG YPPLS
Sbjct: 119 NIIIPLQIGSKDVAFPSLNLLSFWLTFFSVLLINISLIIGEFAKTGWLGYPPLSEKTFSP 178
Query: 411 GRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFVLSC 557
VD +S+ ++GI + F+++ +F+ +C
Sbjct: 179 WVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKLFFNKISIFMWTC 227
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 55.2 bits (127), Expect = 2e-06
Identities = 27/56 (48%), Positives = 34/56 (60%)
Frame = +1
Query: 619 LLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXISQERGK 786
L DR L+ FF GG+ + + ++F FGHPEVYILILP FG+ S S GK
Sbjct: 273 LALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILILPAFGVYSEIFSTFSGK 328
Score = 44.0 bits (99), Expect = 0.004
Identities = 26/78 (33%), Positives = 38/78 (48%)
Frame = +3
Query: 231 N*LVPLILGAPDIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHR 410
N +VPL +GA D+AFP +N+I +V + G YPP + + +
Sbjct: 144 NYVVPLQIGARDVAFPILNSISLWLTAAGAALVMISLVVGAFSTGGWFGYPPYTETLYNP 203
Query: 411 GRSVDLAIFSLHLAGISS 464
G VD I+SL LA + S
Sbjct: 204 GIGVDYWIWSLTLASLGS 221
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +1
Query: 703 FFGHPEVYILILPGFGIISHXISQERGKKE 792
FFGHPEVYILILPGFG+ISH ++ GKKE
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKE 31
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 53.2 bits (122), Expect = 7e-06
Identities = 25/55 (45%), Positives = 33/55 (60%)
Frame = +3
Query: 384 PLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV 548
PL+S+IAH G SVD+AIFSLHLAG+SS + D++PLF+
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFI 126
Score = 35.5 bits (78), Expect = 1.5
Identities = 18/42 (42%), Positives = 19/42 (45%)
Frame = +2
Query: 218 WRIWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKN 343
W IWKL P NK YKILT PL Y K+N
Sbjct: 28 WWIWKLINSANVSGPWYGFPANKQYKILTSAPLTYTPINKRN 69
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 52.8 bits (121), Expect = 1e-05
Identities = 27/62 (43%), Positives = 35/62 (56%)
Frame = +1
Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 732
++ IT AG IT+LL+DRN N FF GG PIL+Q++ FGH +V L
Sbjct: 20 SISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLFGHTDVLFL 79
Query: 733 IL 738
IL
Sbjct: 80 IL 81
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 52.0 bits (119), Expect = 2e-05
Identities = 20/36 (55%), Positives = 28/36 (77%)
Frame = +1
Query: 664 GGGDPILYQHLF*FFGHPEVYILILPGFGIISHXIS 771
GGG P+L+QHLF F+ HP VYI++LP G++S +S
Sbjct: 276 GGGQPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLS 311
Score = 37.9 bits (84), Expect = 0.29
Identities = 21/82 (25%), Positives = 32/82 (39%)
Frame = +3
Query: 147 QIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXXXXXXXXX 326
+ Y + T HA N L+PL++GA D+AFP++N + +
Sbjct: 90 EFYTMLFTMHATVMIFLVIIPILAGMFGNFLIPLMIGADDMAFPKLNMLSYWFMWPAIAC 149
Query: 327 XXXXXIVENGAGTG*TVYPPLS 392
G G T YP L+
Sbjct: 150 FGMSFKYAGGPAAGWTSYPVLA 171
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 49.6 bits (113), Expect = 9e-05
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +1
Query: 637 LNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 753
L S F+P GG P+LYQ F F+ HP VY+++LP GI
Sbjct: 233 LGLSMFNPGIGGVPVLYQQFFWFYSHPAVYVMLLPYLGI 271
Score = 36.3 bits (80), Expect = 0.89
Identities = 28/117 (23%), Positives = 39/117 (33%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R +L P + YN ++T HA N +PL LG D+A PR+
Sbjct: 58 RVQLALPEQTLLVGTTYNQVLTMHAAIMLFFFLIPLGLFGFGNYFLPLQLGVRDVALPRL 117
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 455
N G T Y PL+ + G SV + L+ G
Sbjct: 118 NTFAVWLFIASLILVVLGLFNGGAPSVGWTFYYPLTMDGNQTGVSVFMVAVILNGLG 174
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +1
Query: 718 EVYILILPGFGIISHXISQERGKKE 792
EVYILILPGFG+ISH ISQE GKKE
Sbjct: 155 EVYILILPGFGMISHIISQESGKKE 179
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +3
Query: 546 VLSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 701
++ C +YS +TC WSYYN IN SKLKYI+F F+ST IL
Sbjct: 83 IMICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 48.0 bits (109), Expect = 3e-04
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Frame = +1
Query: 553 AVGITAFXXXXXXXXXAGAITILLTDRNLNTSFF-----------DPAGGGDPILYQHLF 699
++ +T + A+ IL +D L T++F D G +L+ HLF
Sbjct: 198 SINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASLLWAHLF 257
Query: 700 *FFGHPEVYILILPGFGIISHXISQERGKK 789
FFGHPEVYI+ P G+++ G++
Sbjct: 258 WFFGHPEVYIVFFPALGVMAECFQTFTGRR 287
Score = 35.1 bits (77), Expect = 2.0
Identities = 26/97 (26%), Positives = 38/97 (39%)
Frame = +3
Query: 105 RAELGNPGSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRI 284
R EL + G+ + YN V+ H N LVPL +GA D+AFPR+
Sbjct: 48 RLELISSGADLLGSMGYNQAVSTHGLLMVFWFISPFAFGFA-NYLVPLQIGADDLAFPRL 106
Query: 285 NNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSS 395
N + + G T+Y PL++
Sbjct: 107 NALSYWLYLFSGILMGVSFFQGTTFAGGWTMYAPLNT 143
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 46.4 bits (105), Expect = 8e-04
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +1
Query: 604 GAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGIISHXIS 771
G +LL ++ S++ GG +++++LF +FGHPEVY+L+LPG G + +S
Sbjct: 234 GLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEVYLLLLPGTGAMFDYLS 288
Score = 39.1 bits (87), Expect = 0.13
Identities = 36/142 (25%), Positives = 50/142 (35%), Gaps = 1/142 (0%)
Frame = +3
Query: 126 GSLIGAXQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPRINNIRFXX 305
G + A Q YN +VT H L+PL +G+ D+ +PR+N + +
Sbjct: 76 GRFLDALQ-YNQLVTIHGLTMLIWFLGPLGTGFGIY-LIPLAIGSRDMIYPRMNALGYWL 133
Query: 306 XXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISSXXXXXX 482
+ G TG TVY PLSS D A ++ L GI +
Sbjct: 134 FLFSGIMLWSGFFLPGGNLDTGWTVYEPLSSFKFTPYLGADTAAAAVVLRGIGTIIASTE 193
Query: 483 XXXXXXXXXXXXXSFDQLPLFV 548
LPLFV
Sbjct: 194 ILATIFKARAKGYRMMNLPLFV 215
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = +3
Query: 690 TFILIFWTS*SLYFNFTRIWYNFSYXFTRKRKK 788
+ ++IFW+S SLYFN IWYNF Y +T K K
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGK 34
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 44.0 bits (99), Expect = 0.004
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +1
Query: 703 FFGHPEVYILILPGFGIISH 762
FFGHPEVY+LILP FGI+SH
Sbjct: 1 FFGHPEVYVLILPVFGIVSH 20
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.5 bits (88), Expect = 0.095
Identities = 26/74 (35%), Positives = 30/74 (40%)
Frame = +2
Query: 224 IWKLXXXXXXXXXXXXXPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YR 403
I KL P NK +KIL TPL Y N C K C + +NSLP Y
Sbjct: 62 IRKLNTPSNIGSTSHGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYL 121
Query: 404 T*RKIRRSCYFFTT 445
T R +F T
Sbjct: 122 TLGPFRSYNHFCPT 135
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 36.3 bits (80), Expect = 0.89
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +1
Query: 646 SFFDPAGGGDPILYQHLF*FFGHPEVYILILPGFGI 753
S F G P+ Y F F HPEVY+ ILP F I
Sbjct: 311 SHFYTGPTGHPLAYLDQFWFLFHPEVYVFILPAFAI 346
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.1 bits (77), Expect = 2.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 667 GGDPILYQHLF*FFGHPEVYILILPGFGIISHXISQERG 783
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 33.9 bits (74), Expect = 4.7
Identities = 23/62 (37%), Positives = 30/62 (48%)
Frame = +3
Query: 561 DYSXXXXXXTTCFSWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 740
+Y+ TT S S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 741 RI 746
I
Sbjct: 154 SI 155
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 33.9 bits (74), Expect = 4.7
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 679 ILYQHLF*FFGHPEVYILILPGFGIISHXISQERGK 786
+L+ LF F+GHP VY + P FG + + I Q G+
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAGR 259
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 33.5 bits (73), Expect = 6.2
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +1
Query: 673 DPILYQHLF*FFGHPEVYILILPGF 747
+P+L + LF FFGHP VY +LP +
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAY 233
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 572,776,168
Number of Sequences: 1657284
Number of extensions: 9930491
Number of successful extensions: 19706
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 18905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19623
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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