BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_C08
(843 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein... 23 8.8
AY752909-1|AAV30083.1| 92|Anopheles gambiae peroxidase 14 prot... 23 8.8
AY645021-1|AAT92557.1| 163|Anopheles gambiae even-skipped protein. 23 8.8
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein. 23 8.8
AY193727-1|AAO24698.1| 492|Anopheles gambiae cytochrome P450 pr... 23 8.8
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 23 8.8
>Y08163-1|CAA69355.1| 192|Anopheles gambiae hypothetical protein
protein.
Length = 192
Score = 23.4 bits (48), Expect = 8.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = -3
Query: 253 WIFFTDPGANLLANLQRITPSLSTSSYAPFGSGSPKTSEIQVRTXCXWSLFTGRHCV 83
WI T+ GA+ L IT L + PF + K++ I + W+L R+C+
Sbjct: 125 WIGATNIGASNTNKLTWITTDLPVQTKPPFLNVVAKSTCIALTPTGSWTL---RNCL 178
>AY752909-1|AAV30083.1| 92|Anopheles gambiae peroxidase 14
protein.
Length = 92
Score = 23.4 bits (48), Expect = 8.8
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 195 RPLAHPRMRHLVAALPKHQRSK*EP 121
RPLAHP H + P R + +P
Sbjct: 39 RPLAHPEHVHAGGSAPPVHREQCQP 63
>AY645021-1|AAT92557.1| 163|Anopheles gambiae even-skipped protein.
Length = 163
Score = 23.4 bits (48), Expect = 8.8
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -3
Query: 241 TDPGANLLANLQRITPSLSTSSYAPFGSGSPKT 143
T PG N +T S+ S YAP +T
Sbjct: 28 TTPGVYSAPNSMLVTGSMPPSPYAPLSMSKSQT 60
>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
Length = 2259
Score = 23.4 bits (48), Expect = 8.8
Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 499 NFGPTTLNLT-SKWASIRAPPSPVMVASVT 585
N GP + +T +++ APPSP++ A++T
Sbjct: 1931 NDGPLSTGVTIAEYGHWVAPPSPMVRANIT 1960
>AY193727-1|AAO24698.1| 492|Anopheles gambiae cytochrome P450
protein.
Length = 492
Score = 23.4 bits (48), Expect = 8.8
Identities = 9/31 (29%), Positives = 14/31 (45%)
Frame = -3
Query: 247 FFTDPGANLLANLQRITPSLSTSSYAPFGSG 155
+F DP + T + +Y PFG+G
Sbjct: 404 YFPDPELHSPERFDEATKNYDADAYYPFGAG 434
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 23.4 bits (48), Expect = 8.8
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 617 EKFRSNLHVAGVTEATMTGLGGALIEAHLE 528
+ RSN+ VA +E + G+G LI+ +E
Sbjct: 164 QSLRSNVTVADGSENRVEGVGDCLIKCAVE 193
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 907,812
Number of Sequences: 2352
Number of extensions: 19719
Number of successful extensions: 33
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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