Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_C06
(791 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9BWJ5 Cluster: Splicing factor 3B subunit 5; n=16; Euk... 164 3e-39
UniRef50_Q9LW64 Cluster: Uncharacterized protein At3g23325; n=14... 119 7e-26
UniRef50_Q5KKD6 Cluster: Putative uncharacterized protein; n=2; ... 113 5e-24
UniRef50_UPI0000499A91 Cluster: splicing factor 3B subunit 10; n... 106 6e-22
UniRef50_A5K2G5 Cluster: Splicing factor, putative; n=3; Plasmod... 106 7e-22
UniRef50_Q9P7R6 Cluster: Uncharacterized protein C211.05; n=11; ... 102 9e-21
UniRef50_Q7R9T6 Cluster: Putative uncharacterized protein PY0677... 97 3e-19
UniRef50_A0DS79 Cluster: Chromosome undetermined scaffold_61, wh... 95 2e-18
UniRef50_A7ANA1 Cluster: Splicing factor 3B subunit 10 (SF3b10),... 94 3e-18
UniRef50_Q5B5U0 Cluster: Putative uncharacterized protein; n=3; ... 85 2e-15
UniRef50_Q2H468 Cluster: Putative uncharacterized protein; n=1; ... 83 8e-15
UniRef50_Q8MVJ5 Cluster: CG11985-like protein; n=1; Boltenia vil... 77 4e-13
UniRef50_A7TD36 Cluster: Predicted protein; n=2; Eumetazoa|Rep: ... 70 8e-11
UniRef50_A3FQN7 Cluster: Putative uncharacterized protein; n=1; ... 69 2e-10
UniRef50_Q6CGS7 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 61 3e-08
UniRef50_A2DPN8 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_Q6BLV4 Cluster: Similar to ca|CA1331|IPF11714 Candida a... 56 8e-07
UniRef50_Q5EFD3 Cluster: Sf3b complex subunit; n=5; Trypanosomat... 50 5e-05
UniRef50_Q754L3 Cluster: AFR059Wp; n=1; Eremothecium gossypii|Re... 50 5e-05
UniRef50_A7TNC3 Cluster: Putative uncharacterized protein; n=1; ... 49 2e-04
UniRef50_A5DSL9 Cluster: Predicted protein; n=1; Lodderomyces el... 41 0.041
UniRef50_Q3LWL8 Cluster: MRNA splicing factor 3b5; n=1; Bigelowi... 37 0.67
UniRef50_P0C074 Cluster: RDS3 complex subunit 10; n=2; Saccharom... 36 0.88
UniRef50_Q09215 Cluster: Uncharacterized protein B0495.6; n=1; C... 36 1.5
UniRef50_Q5DUQ9 Cluster: Putative uncharacterized protein; n=1; ... 34 4.7
>UniRef50_Q9BWJ5 Cluster: Splicing factor 3B subunit 5; n=16;
Eukaryota|Rep: Splicing factor 3B subunit 5 - Homo
sapiens (Human)
Length = 86
Score = 164 bits (398), Expect = 3e-39
Identities = 71/85 (83%), Positives = 79/85 (92%)
Frame = +2
Query: 119 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 298
M +RY IHSQLEHLQSKYIGTGHADTTK+EWL+NQHRDS CSYMGH DLL+YFAI ENES
Sbjct: 1 MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENES 60
Query: 299 KARVKFNLMERMLQPCGPPPEKPED 373
KARV+FNLME+MLQPCGPP +KPE+
Sbjct: 61 KARVRFNLMEKMLQPCGPPADKPEE 85
>UniRef50_Q9LW64 Cluster: Uncharacterized protein At3g23325; n=14;
Eukaryota|Rep: Uncharacterized protein At3g23325 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 119 bits (287), Expect = 7e-26
Identities = 49/83 (59%), Positives = 67/83 (80%)
Frame = +2
Query: 125 ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKA 304
+R+NI+SQLEHLQ+KY+GTGHAD +++EW +N RDS SY+GH +LSYFAI ENES
Sbjct: 5 DRFNINSQLEHLQAKYVGTGHADLSRFEWTVNIQRDSYASYIGHYPMLSYFAIAENESIG 64
Query: 305 RVKFNLMERMLQPCGPPPEKPED 373
R ++N M++ML PCG PPE+ ++
Sbjct: 65 RERYNFMQKMLLPCGLPPEREDE 87
>UniRef50_Q5KKD6 Cluster: Putative uncharacterized protein; n=2;
Basidiomycota|Rep: Putative uncharacterized protein -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 87
Score = 113 bits (272), Expect = 5e-24
Identities = 46/82 (56%), Positives = 62/82 (75%)
Frame = +2
Query: 128 RYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKAR 307
RY ++QLE L ++Y GTGHADTTKYEWL +QHRD+ S +GHP LL+Y ++ + E +AR
Sbjct: 6 RYTANTQLEQLHARYTGTGHADTTKYEWLTHQHRDTLASIVGHPPLLAYLSVADGECQAR 65
Query: 308 VKFNLMERMLQPCGPPPEKPED 373
+F + E+MLQPCG PP K E+
Sbjct: 66 ERFEVTEKMLQPCGKPPGKTEE 87
>UniRef50_UPI0000499A91 Cluster: splicing factor 3B subunit 10; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: splicing factor 3B
subunit 10 - Entamoeba histolytica HM-1:IMSS
Length = 100
Score = 106 bits (255), Expect = 6e-22
Identities = 43/77 (55%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +2
Query: 137 IHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKF 316
+ +QLEH+Q KY+GTGH D +KYEW+ NQ RDS SY+GH L++Y A+ EN+S R ++
Sbjct: 9 LQTQLEHMQLKYVGTGHPDISKYEWICNQQRDSYASYIGHHSLMAYIAVAENQSIGRTRY 68
Query: 317 NLMERMLQPCG-PPPEK 364
+ERM PCG PPPEK
Sbjct: 69 QFLERMCDPCGKPPPEK 85
>UniRef50_A5K2G5 Cluster: Splicing factor, putative; n=3;
Plasmodium|Rep: Splicing factor, putative - Plasmodium
vivax
Length = 88
Score = 106 bits (254), Expect = 7e-22
Identities = 44/80 (55%), Positives = 62/80 (77%)
Frame = +2
Query: 125 ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKA 304
+R+NIH+QLEHLQSKY G+GH+DTT++EWL N HRD+ S++GH L+YFAIVENE A
Sbjct: 5 DRFNIHAQLEHLQSKYQGSGHSDTTRWEWLTNIHRDTLASHVGHYSRLAYFAIVENEPIA 64
Query: 305 RVKFNLMERMLQPCGPPPEK 364
++++ ++ M P P P+K
Sbjct: 65 KIRYRCLQNMSLPVVPKPKK 84
>UniRef50_Q9P7R6 Cluster: Uncharacterized protein C211.05; n=11;
Ascomycota|Rep: Uncharacterized protein C211.05 -
Schizosaccharomyces pombe (Fission yeast)
Length = 85
Score = 102 bits (245), Expect = 9e-21
Identities = 41/80 (51%), Positives = 59/80 (73%)
Frame = +2
Query: 119 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 298
M +R ++LE LQ++Y+G G+A TTKYEW++NQHRD+ S +GHP LL+Y A E
Sbjct: 1 MADRLRSQAKLEQLQARYVGVGNAFTTKYEWMVNQHRDTLSSVVGHPPLLAYMATALGEP 60
Query: 299 KARVKFNLMERMLQPCGPPP 358
+ +V+ NL+E+M+ PCGPPP
Sbjct: 61 RVQVRKNLLEKMIMPCGPPP 80
>UniRef50_Q7R9T6 Cluster: Putative uncharacterized protein PY06774;
n=4; Aconoidasida|Rep: Putative uncharacterized protein
PY06774 - Plasmodium yoelii yoelii
Length = 103
Score = 97.5 bits (232), Expect = 3e-19
Identities = 42/76 (55%), Positives = 58/76 (76%), Gaps = 2/76 (2%)
Frame = +2
Query: 107 FKNKMG--ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFA 280
F KM +R+NIH+QLEHLQSKY G+GHADTT++EWL N HRD+ S++GH L+YFA
Sbjct: 24 FTEKMSTFDRFNIHAQLEHLQSKYQGSGHADTTRWEWLTNIHRDTLASHVGHYSRLAYFA 83
Query: 281 IVENESKARVKFNLME 328
I ENE A++++ ++
Sbjct: 84 IAENEPIAKIRYRCLQ 99
>UniRef50_A0DS79 Cluster: Chromosome undetermined scaffold_61, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_61,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 88
Score = 95.1 bits (226), Expect = 2e-18
Identities = 36/80 (45%), Positives = 54/80 (67%)
Frame = +2
Query: 119 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 298
M +R+N +Q EHL ++Y+GTG+ DT KY W + HRD+ S++GH + YF ENE
Sbjct: 1 MQDRFNFQTQTEHLHARYVGTGNPDTPKYVWNNHIHRDTLASHIGHHSRMVYFCTAENEP 60
Query: 299 KARVKFNLMERMLQPCGPPP 358
R+++ + +M+QPCGPPP
Sbjct: 61 MCRLRYKFLTKMIQPCGPPP 80
>UniRef50_A7ANA1 Cluster: Splicing factor 3B subunit 10 (SF3b10),
putative; n=3; Eukaryota|Rep: Splicing factor 3B subunit
10 (SF3b10), putative - Babesia bovis
Length = 87
Score = 94.3 bits (224), Expect = 3e-18
Identities = 39/73 (53%), Positives = 55/73 (75%)
Frame = +2
Query: 125 ERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKA 304
+R+NIH+QLEHLQSKY GTGH + TK+EW +N RD+ S+ GH L+YFAI ENES +
Sbjct: 5 DRFNIHAQLEHLQSKYQGTGHVNNTKWEWALNIQRDTLASHAGHYTRLAYFAICENESIS 64
Query: 305 RVKFNLMERMLQP 343
R++ ++ M++P
Sbjct: 65 RIRHRCLQNMVKP 77
>UniRef50_Q5B5U0 Cluster: Putative uncharacterized protein; n=3;
Pezizomycotina|Rep: Putative uncharacterized protein -
Emericella nidulans (Aspergillus nidulans)
Length = 111
Score = 85.0 bits (201), Expect = 2e-15
Identities = 39/81 (48%), Positives = 55/81 (67%)
Frame = +2
Query: 119 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 298
M ++ LE Q++YIGTGHADTTK+E+L N RDS SY+GHP LL Y A+ ES
Sbjct: 1 MADKLRTLQNLEAQQARYIGTGHADTTKHEFLNNIVRDSYASYIGHPPLLGYMALGMGES 60
Query: 299 KARVKFNLMERMLQPCGPPPE 361
+ +V+ ++E+M++ G PPE
Sbjct: 61 REKVRAMMVEKMVRGVGAPPE 81
>UniRef50_Q2H468 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 121
Score = 83.0 bits (196), Expect = 8e-15
Identities = 37/76 (48%), Positives = 50/76 (65%)
Frame = +2
Query: 119 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 298
M ++ +LE LQ+K+IGTGH DTT +EW N HRD+ S GHP LLSY A+ ENE
Sbjct: 1 MADKLRNQQELERLQAKFIGTGHPDTTSWEWKTNIHRDTYSSIAGHPPLLSYIALAENEP 60
Query: 299 KARVKFNLMERMLQPC 346
A+V+ ++ R+ PC
Sbjct: 61 VAKVRVQMI-RVWNPC 75
>UniRef50_Q8MVJ5 Cluster: CG11985-like protein; n=1; Boltenia
villosa|Rep: CG11985-like protein - Boltenia villosa
Length = 49
Score = 77.4 bits (182), Expect = 4e-13
Identities = 30/41 (73%), Positives = 37/41 (90%)
Frame = +2
Query: 245 YMGHPDLLSYFAIVENESKARVKFNLMERMLQPCGPPPEKP 367
Y+GHPDLLSY +I ENE+KARV+FNL+ RM QPCGPPP++P
Sbjct: 6 YIGHPDLLSYISIAENEAKARVRFNLLXRMFQPCGPPPDRP 46
>UniRef50_A7TD36 Cluster: Predicted protein; n=2; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 53
Score = 69.7 bits (163), Expect = 8e-11
Identities = 28/41 (68%), Positives = 36/41 (87%)
Frame = +2
Query: 206 EWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNLME 328
EWL+NQHRDS +Y+GH +LL YFA+ ENE+KARV+FNL+E
Sbjct: 1 EWLVNQHRDSASAYIGHGNLLDYFALAENETKARVRFNLLE 41
>UniRef50_A3FQN7 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 85
Score = 68.5 bits (160), Expect = 2e-10
Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Frame = +2
Query: 128 RYNIHSQLEHLQSKYIGTGHADTTKY-EWLMNQHRDSCCSYMGHPDLLSYFAIVENESKA 304
R I+ QLE L SKY GTGH +T + EW N RD+ S + H +SYFAI EN SKA
Sbjct: 6 RSTIYFQLEQLHSKYQGTGHINTKRSSEWGDNILRDTASSNIMHQSRISYFAIAENTSKA 65
Query: 305 RVKFNLMERML 337
R+ F ++E M+
Sbjct: 66 RISFRMLESMI 76
>UniRef50_Q6CGS7 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 122
Score = 61.3 bits (142), Expect = 3e-08
Identities = 25/71 (35%), Positives = 43/71 (60%)
Frame = +2
Query: 161 QSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNLMERMLQ 340
QS+Y+G G+ DTTK EW N RDS SY+GHP +LS+ ++ +++A + ++++ +
Sbjct: 51 QSRYLGVGNPDTTKQEWQTNVARDSYASYIGHPGVLSHMSLALGQTEAETRIQFLDKLAK 110
Query: 341 PCGPPPEKPED 373
P + D
Sbjct: 111 VGTQPKHENGD 121
>UniRef50_A2DPN8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 100
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +2
Query: 152 EHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNLMER 331
E Q + TG DT K EW NQ R+S + + P LSY ++ + + VK NL+++
Sbjct: 15 EQQQLQNEDTGTPDTGKREWRENQVRESLATILLLPGFLSYQSMGLGQPEIVVKTNLIDK 74
Query: 332 MLQPCGPPPEKPED 373
M+QPCGP P P D
Sbjct: 75 MVQPCGPAPPAPVD 88
>UniRef50_Q6BLV4 Cluster: Similar to ca|CA1331|IPF11714 Candida
albicans IPF11714 unknown function; n=2;
Saccharomycetaceae|Rep: Similar to ca|CA1331|IPF11714
Candida albicans IPF11714 unknown function -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 85
Score = 56.4 bits (130), Expect = 8e-07
Identities = 27/85 (31%), Positives = 49/85 (57%)
Frame = +2
Query: 119 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 298
M ++ +Q L+SKYIG G+AD T+ E++ N +RD S H ++L Y +++ NE
Sbjct: 1 MADKVKDINQYNQLKSKYIGLGNADITREEFMTNVNRDIYSSLAQHDNILYYNSVIINEP 60
Query: 299 KARVKFNLMERMLQPCGPPPEKPED 373
++ ++++M P +KPE+
Sbjct: 61 MELLRQKMIKKMASPIQNNAKKPEN 85
>UniRef50_Q5EFD3 Cluster: Sf3b complex subunit; n=5;
Trypanosomatidae|Rep: Sf3b complex subunit - Trypanosoma
cruzi
Length = 89
Score = 50.4 bits (115), Expect = 5e-05
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +2
Query: 122 GERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESK 301
G Y H +E + + GT +++K +WL QHRD+ S + H D L Y ++VEN +
Sbjct: 9 GLTYQPH--IEQVLLRNEGTLTLESSKDDWLRYQHRDTLASLILHRDRLEYLSLVENVAP 66
Query: 302 ARVKFNLMERMLQP 343
AR++ L+ER + P
Sbjct: 67 ARMERILLERAVDP 80
>UniRef50_Q754L3 Cluster: AFR059Wp; n=1; Eremothecium gossypii|Rep:
AFR059Wp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 84
Score = 50.4 bits (115), Expect = 5e-05
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +2
Query: 119 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIV-ENE 295
M ++ + ++ K+IG G DT++ EWL HRD+ S +GH LL Y A+
Sbjct: 1 MSDKIREERLFQAMKQKHIGLGTDDTSRDEWLTQVHRDTYNSLLGHSALLQYAALSGPTR 60
Query: 296 SKARVKFNLMERMLQPCGPP 355
+KA + ++ RM CG P
Sbjct: 61 NKAETRLAMVSRM---CGGP 77
>UniRef50_A7TNC3 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 87
Score = 48.8 bits (111), Expect = 2e-04
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 119 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 298
M ++ + L+ KY+G G+ TTK EWL N +RD+ S GH L Y + + S
Sbjct: 1 MSDKVRQQQLYQVLKQKYVGLGNEKTTKEEWLTNVNRDTYNSLQGHSASLEYITLGKRAS 60
Query: 299 KAR-VKFNLMERM 334
R K +L+ +M
Sbjct: 61 SKRDTKVDLINKM 73
>UniRef50_A5DSL9 Cluster: Predicted protein; n=1; Lodderomyces
elongisporus NRRL YB-4239|Rep: Predicted protein -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 80
Score = 40.7 bits (91), Expect = 0.041
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +2
Query: 119 MGERYNIHSQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENES 298
M ++ Q L+SKY G G++DTT E+ + D+ S H LL + A++ NE
Sbjct: 1 MADKIREKHQYALLKSKYDGIGNSDTTSKEFQTTIYNDTFASLAHHKHLLLHNAVIRNEH 60
Query: 299 KARVKFNLMERM 334
V+ ++++
Sbjct: 61 PELVRQEYLKKL 72
>UniRef50_Q3LWL8 Cluster: MRNA splicing factor 3b5; n=1;
Bigelowiella natans|Rep: MRNA splicing factor 3b5 -
Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 72
Score = 36.7 bits (81), Expect = 0.67
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +2
Query: 143 SQLEHLQSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKARVKFNL 322
+QL+ L KY GTG+ T++ EW+ HRD+ + + LL ++ N + + +K L
Sbjct: 6 NQLDFLFWKYEGTGNRRTSEKEWISQIHRDNISFILENYGLLKALSLKYNVTVSTLKLFL 65
Query: 323 M 325
+
Sbjct: 66 L 66
>UniRef50_P0C074 Cluster: RDS3 complex subunit 10; n=2;
Saccharomyces cerevisiae|Rep: RDS3 complex subunit 10 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 85
Score = 36.3 bits (80), Expect = 0.88
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +2
Query: 161 QSKYIGTGHADTTKYEWLMNQHRDSCCSYMGHPDLLSYFAIVENESKAR-VKFNLMERM 334
+ KYIG G TT+ +W N D+ + GH L Y ++ + R + +L++ M
Sbjct: 15 KQKYIGLGDESTTREQWQRNVRNDTLNTLQGHSASLEYVSLSRGDLSIRDTRIHLLKSM 73
>UniRef50_Q09215 Cluster: Uncharacterized protein B0495.6; n=1;
Caenorhabditis elegans|Rep: Uncharacterized protein
B0495.6 - Caenorhabditis elegans
Length = 87
Score = 35.5 bits (78), Expect = 1.5
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 122 GERYNIHSQLEHLQSKYIGT 181
GER+++ +QLEHLQSKY GT
Sbjct: 5 GERFHVLAQLEHLQSKYTGT 24
>UniRef50_Q5DUQ9 Cluster: Putative uncharacterized protein; n=1;
Bacillus mycoides|Rep: Putative uncharacterized protein
- Bacillus mycoides
Length = 240
Score = 33.9 bits (74), Expect = 4.7
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +2
Query: 29 YCYVISILAELEYKL*SLYDFNKHLAFKNKMGERYNIHSQLEHLQSKYIGTGHADTTKYE 208
YC + +L + K L N H K+ E I+S+L + Y G +T K+E
Sbjct: 119 YCLIAFLLIPKDIKTSDLKVINSHFYQKSDKREILYIYSKLTPFLANYSGDYSIETKKHE 178
Query: 209 WLMNQHRDS 235
++ HR+S
Sbjct: 179 INIHAHRNS 187
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,834,084
Number of Sequences: 1657284
Number of extensions: 12549465
Number of successful extensions: 27007
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26997
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67496806780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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