Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_C03
         (532 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0592 + 4702327-4702416,4702510-4702568,4703900-4703994,470...   107   7e-24
12_01_0511 + 4049760-4049967,4050096-4050166,4051306-4051364,405...    60   1e-09
03_02_0222 + 6540095-6540099,6541215-6541339,6541440-6541766,654...    31   0.44 
12_02_0253 + 16443738-16443923,16444319-16444559,16444603-164446...    30   1.3  
02_05_0771 - 31628535-31629133,31629223-31629987,31630808-316309...    27   7.1  

>11_01_0592 +
           4702327-4702416,4702510-4702568,4703900-4703994,
           4704348-4704352
          Length = 82

 Score =  107 bits (256), Expect = 7e-24
 Identities = 55/81 (67%), Positives = 58/81 (71%), Gaps = 18/81 (22%)
 Frame = +2

Query: 251 MIIPVRCFTCGKV------------------IGNKWEAYLGLLQADYTEGDALDVLGLKR 376
           MIIPVRCFTCGKV                  IGNKW+ YL LLQADYTEGDALD LGL R
Sbjct: 1   MIIPVRCFTCGKVSLVSPSHASRLGDGRVLVIGNKWDLYLDLLQADYTEGDALDALGLVR 60

Query: 377 YCCRRMLLGHVDLIEKLLNYS 439
           YCCRRML+ HVDLIEKLLNY+
Sbjct: 61  YCCRRMLMTHVDLIEKLLNYN 81


>12_01_0511 +
           4049760-4049967,4050096-4050166,4051306-4051364,
           4052424-4052549,4052943-4053037,4053263-4053312
          Length = 202

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = +2

Query: 347 DALDVLGLKRYCCRRMLLGHVDLIEKLLNYS 439
           DALD LGL RYCCRRML+ HVDLIEKLLNY+
Sbjct: 156 DALDALGLVRYCCRRMLMTHVDLIEKLLNYN 186



 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 21/32 (65%), Positives = 24/32 (75%)
 Frame = +2

Query: 284 KVIGNKWEAYLGLLQADYTEGDALDVLGLKRY 379
           KVIGNKW+ YL LLQADYTEG +    G +RY
Sbjct: 93  KVIGNKWDLYLDLLQADYTEGGSGRQRGEERY 124


>03_02_0222 +
           6540095-6540099,6541215-6541339,6541440-6541766,
           6541815-6543215,6543268-6543357,6543800-6544515,
           6545549-6545707,6545877-6546186,6546794-6546861,
           6547354-6547896
          Length = 1247

 Score = 31.5 bits (68), Expect = 0.44
 Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
 Frame = +2

Query: 305 EAYLGLLQADYTEGDALDVLGLKRYCCRR-MLLGHV-DLIEKLLN 433
           +AY+GLL A +  GD   VL ++ YC RR  LLG + DL +++++
Sbjct: 841 DAYIGLLTAKFERGDEHGVL-IQEYCDRRDELLGSLYDLAKQIVD 884


>12_02_0253 +
           16443738-16443923,16444319-16444559,16444603-16444688,
           16444788-16444919,16445003-16445167,16445623-16445910
          Length = 365

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 17/34 (50%), Positives = 20/34 (58%)
 Frame = +3

Query: 6   GRCISALSLRVSKVFLSKSNHLVHCKASHCSVSS 107
           GRC S +SL  S  F SK +HLV C A   SV +
Sbjct: 125 GRCKSPISLICSVNFFSKMDHLV-CNAGIASVGA 157


>02_05_0771 -
           31628535-31629133,31629223-31629987,31630808-31630905,
           31631024-31631193,31631297-31631596,31632208-31632618
          Length = 780

 Score = 27.5 bits (58), Expect = 7.1
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +3

Query: 12  CISALSLRVSKVFLSKSNHLVHCKASHCSVSSL 110
           CIS   L+V + ++  +  L  C ++ C+VSS+
Sbjct: 447 CISVTPLQVLQGYVKDTRFLAGCNSAACNVSSI 479


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,590,452
Number of Sequences: 37544
Number of extensions: 238253
Number of successful extensions: 477
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1178343540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)