Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_B20
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   3.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   6.7  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.7  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 271 YSTHPETHIWSCKLCTRA 324
           Y TH     + CK+C RA
Sbjct: 154 YRTHTGERPFKCKICGRA 171


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 277 THPETHIWSCKLCTRAHR 330
           TH +   +SC +C +A R
Sbjct: 101 THTDERPYSCDICGKAFR 118


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 354 LRRWPPAP 331
           LR WPPAP
Sbjct: 339 LRLWPPAP 346


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +3

Query: 231 EHSDGRTSFPMCFIFYTPRD 290
           E  D +   P  F+FY P D
Sbjct: 486 ERPDVKIFLPFRFLFYKPED 505


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,281
Number of Sequences: 336
Number of extensions: 2840
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)