Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_B20
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014645-1|AAT27269.1|  138|Drosophila melanogaster RE40543p pro...   127   2e-29
AE014134-2692|AAF53517.2|  138|Drosophila melanogaster CG5869-PA...   127   2e-29
AY118642-1|AAM50011.1|   65|Drosophila melanogaster SD03793p pro...    76   4e-14

>BT014645-1|AAT27269.1|  138|Drosophila melanogaster RE40543p
           protein.
          Length = 138

 Score =  127 bits (306), Expect = 2e-29
 Identities = 59/110 (53%), Positives = 74/110 (67%)
 Frame = +3

Query: 66  FRFQXHTSNSALILKVNREKQXXXXXXXXXXXXXXXXQDILPSHQPRFIVYSYKMEHSDG 245
           FRF    +N+ALILKV+REKQ                QD LP HQPR+++Y+YKM H D 
Sbjct: 20  FRFSKSKNNAALILKVDREKQTVVLDEFIDDISVDELQDTLPGHQPRYVIYTYKMVHDDQ 79

Query: 246 RTSFPMCFIFYTPRDAHMELQVMYAGTQRALAATVGAPRLLEVREIDELT 395
           R S+PMCFIFYTPRD+ +ELQ+MYA T+ AL   V   R+ E+RE+DELT
Sbjct: 80  RISYPMCFIFYTPRDSQIELQMMYACTKSALQREVDLTRVYEIRELDELT 129


>AE014134-2692|AAF53517.2|  138|Drosophila melanogaster CG5869-PA
           protein.
          Length = 138

 Score =  127 bits (306), Expect = 2e-29
 Identities = 59/110 (53%), Positives = 74/110 (67%)
 Frame = +3

Query: 66  FRFQXHTSNSALILKVNREKQXXXXXXXXXXXXXXXXQDILPSHQPRFIVYSYKMEHSDG 245
           FRF    +N+ALILKV+REKQ                QD LP HQPR+++Y+YKM H D 
Sbjct: 20  FRFSKSKNNAALILKVDREKQTVVLDEFIDDISVDELQDTLPGHQPRYVIYTYKMVHDDQ 79

Query: 246 RTSFPMCFIFYTPRDAHMELQVMYAGTQRALAATVGAPRLLEVREIDELT 395
           R S+PMCFIFYTPRD+ +ELQ+MYA T+ AL   V   R+ E+RE+DELT
Sbjct: 80  RISYPMCFIFYTPRDSQIELQMMYACTKSALQREVDLTRVYEIRELDELT 129


>AY118642-1|AAM50011.1|   65|Drosophila melanogaster SD03793p
           protein.
          Length = 65

 Score = 76.2 bits (179), Expect = 4e-14
 Identities = 34/56 (60%), Positives = 42/56 (75%)
 Frame = +3

Query: 228 MEHSDGRTSFPMCFIFYTPRDAHMELQVMYAGTQRALAATVGAPRLLEVREIDELT 395
           M H D R S+PMCFIFYTPRD+ +ELQ+MYA T+ AL   V   R+ E+RE+DELT
Sbjct: 1   MVHDDQRISYPMCFIFYTPRDSQIELQMMYACTKSALQREVDLTRVYEIRELDELT 56


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,173,381
Number of Sequences: 53049
Number of extensions: 556717
Number of successful extensions: 1434
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)