Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_B19
         (437 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    48   4e-08
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    34   7e-04
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     20   9.0  

>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 48.0 bits (109), Expect = 4e-08
 Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +3

Query: 18  MSKFTLLFLVLACFXMAXAQLTFTSSWGGKRAAIAGTVSCRXXX-SLASIYKLIQNEAEK 194
           M +  L  L++    +  AQL FT +WG KRA    +  C+    ++  IYK+IQNEA+K
Sbjct: 1   MHRVLLTVLLITIVGLCAAQLNFTPNWG-KRAPEGESNRCKESVDTIMLIYKIIQNEAQK 59

Query: 195 LLLCQK 212
           L+ C+K
Sbjct: 60  LVDCEK 65


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 33.9 bits (74), Expect = 7e-04
 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
 Frame = +3

Query: 18  MSKFTLLFLVLACFXMAXAQLTFTSSWGGKRAAIAGT--VSCR-XXXSLASIYKLIQ 179
           MS+  L+ +++A   +  AQL F++ WG +  + AG+   +C+    ++  IYK+IQ
Sbjct: 1   MSRMFLIVVLIAFVGVCTAQLNFSTDWGKRSGSSAGSDANNCKEPVETIMLIYKIIQ 57


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 82  LSHPAGVEKGLPSPAL 129
           L HPA     L SPA+
Sbjct: 119 LPHPAAAHSALLSPAM 134



 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 194 TPAMPEALSRH 226
           +PAMP  L+RH
Sbjct: 131 SPAMPHNLTRH 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,343
Number of Sequences: 336
Number of extensions: 1494
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)