Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_B18
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    24   1.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   2.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.6  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   6.1  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   6.1  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   6.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   8.1  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   8.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   8.1  

>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -3

Query: 450 RGCSGPTFSSIYTSLCENVLNSLLK 376
           +G + P F+ +Y   C+N  N  L+
Sbjct: 148 QGLTSPIFNLVYVYCCDNNFNVFLR 172


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +2

Query: 278 IEAPNRQIIYQQEKMQYDSHQFTALASGDYKVCFSNE 388
           I A  +++   + K++YD    T+++SG Y     NE
Sbjct: 876 INAMRQELEGYKVKLEYDGPYETSISSGQYTTKDPNE 912


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 7/21 (33%), Positives = 8/21 (38%)
 Frame = +1

Query: 412 CVYGTKCWTGAASSWCRRSCN 474
           C   T+CW       C   CN
Sbjct: 528 CTASTRCWEVFMDGICNEDCN 548


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +3

Query: 129 LMVFFRKVSS*RLNFLIVPKXVFIKQWTRIRLL 227
           +++FF++ S    N+ ++    F K+ T  RLL
Sbjct: 66  VLMFFKEASLYCFNYYVIVVTTFYKRRTWTRLL 98


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = -2

Query: 484 CKNSCMISYTRKRLLRSNI*FHIHKFM*KCTKL 386
           C N+   ++T K+L      FH +K++ +  ++
Sbjct: 252 CLNTGRTNFTNKQLTELEKEFHFNKYLTRARRI 284


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = -2

Query: 484 CKNSCMISYTRKRLLRSNI*FHIHKFM*KCTKL 386
           C N+   ++T K+L      FH +K++ +  ++
Sbjct: 41  CLNTGRTNFTNKQLTELEKEFHFNKYLTRARRI 73


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/33 (24%), Positives = 18/33 (54%)
 Frame = -2

Query: 484 CKNSCMISYTRKRLLRSNI*FHIHKFM*KCTKL 386
           C N+   ++T K+L      FH +K++ +  ++
Sbjct: 41  CLNTGRTNFTNKQLTELEKEFHFNKYLTRARRI 73


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = -2

Query: 463 SYTRKRLLRSNI*FHIHKFM*KCTKLITKTHFVITRRQ 350
           +YT  +LL     FH +K++ +  ++       +T RQ
Sbjct: 10  AYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 47


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -1

Query: 260 TVLQKLLGTPMKQPY 216
           TVL  +L TP K PY
Sbjct: 96  TVLAGILTTPFKLPY 110


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = -2

Query: 463 SYTRKRLLRSNI*FHIHKFM*KCTKLITKTHFVITRRQ 350
           +YT  +LL     FH +K++ +  ++       +T RQ
Sbjct: 141 AYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQ 178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,427
Number of Sequences: 336
Number of extensions: 3678
Number of successful extensions: 23
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)