Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_B18
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical ... 210 8e-55
AF014940-5|AAB63937.1| 203|Caenorhabditis elegans Suppressor/en... 91 8e-19
Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical pr... 81 6e-16
AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical ... 57 2e-08
U40417-1|AAA81411.1| 114|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical pr... 29 4.7
AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPas... 29 4.7
AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical... 29 4.7
Z92815-5|CAH10781.1| 313|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81547-6|CAB04462.2| 313|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z75544-2|CAC42316.1| 480|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z75544-1|CAA99881.1| 476|Caenorhabditis elegans Hypothetical pr... 28 6.3
U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with... 28 6.3
U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with... 28 6.3
AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans nonsense-medi... 28 6.3
AF040653-3|ABS83855.1| 390|Caenorhabditis elegans Hypothetical ... 28 6.3
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 28 8.3
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 28 8.3
U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 28 8.3
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 28 8.3
AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical... 28 8.3
AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin ... 28 8.3
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 28 8.3
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 28 8.3
>AF039713-7|AAB96722.1| 203|Caenorhabditis elegans Hypothetical
protein F57B10.5 protein.
Length = 203
Score = 210 bits (513), Expect = 8e-55
Identities = 101/198 (51%), Positives = 131/198 (66%), Gaps = 1/198 (0%)
Frame = +2
Query: 116 LITIINGVLSKSVELTFELPDSAEXCFYQTMDKDTAASLEYQVISGGQYDVSVKIEAPNR 295
+++ I L S+ELTFELPD+A CFY+ + KD E+QV++GG YDV + IE PN
Sbjct: 6 IVSSILVALGLSIELTFELPDNANQCFYEDLKKDVDTVFEFQVVTGGHYDVDLIIEDPNG 65
Query: 296 QIIYQQEKMQYDSHQFTALASGDYKVCFSNEFSTFSHKLVYMELNVGPEQPL-PGVGDHA 472
+++Y+ K QYDS F A G YK CFSNEFSTFSHK+VYM+ G + L V A
Sbjct: 66 KVLYKDTKKQYDSINFKAEVEGTYKACFSNEFSTFSHKIVYMDWQFGDQNALHAAVTQGA 125
Query: 473 TVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKVFWWSMGETLAIVCVA 652
+TQLE A I L I D+QTHHRLREA GRKRAE+LNE+V WS+G++ +V +
Sbjct: 126 HAMTQLENYAVAIGDKLRTIDDYQTHHRLREATGRKRAEELNERVMIWSLGQSAVVVFIG 185
Query: 653 FTQVMILKNFFSDKPTLY 706
QV +LK+FF+DK T Y
Sbjct: 186 IGQVFLLKSFFNDKRTRY 203
>AF014940-5|AAB63937.1| 203|Caenorhabditis elegans
Suppressor/enhancer of lin-12 protein9 protein.
Length = 203
Score = 91.1 bits (216), Expect = 8e-19
Identities = 53/170 (31%), Positives = 77/170 (45%), Gaps = 3/170 (1%)
Frame = +2
Query: 185 EXCFYQTMDKDTAASLEYQVISGGQYDVSVKIEAPNRQIIYQQEKMQYDSHQFTALASGD 364
E CF+ + T L ++V GG D+ VKI P+ + IY+ E+ F A G
Sbjct: 28 EQCFFDRLTSGTKMGLMFEVAEGGFLDIDVKITGPDNKEIYKGERESSGKFTFAAHMDGV 87
Query: 365 YKVCFSNEFSTFSHKLVYMELNV-GPEQPLPG--VGDHATVLTQLETSAEEIHSALNRII 535
Y CF N+ ST + K V + + P Q PG A +LE E+ SAL +
Sbjct: 88 YTYCFGNKMSTMTPKAVMFTVEITEPHQQAPGAAANQDAADNAKLEEMVRELSSALMSVK 147
Query: 536 DHQTHHRLREAQGRKRAEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFF 685
Q + +RE R E+ N +V W+ E +V + Q+ LK FF
Sbjct: 148 HEQEYMEVRERVHRNINENTNSRVVMWAAFEAFVLVGMTVGQIFYLKRFF 197
>Z68316-4|CAA92683.1| 234|Caenorhabditis elegans Hypothetical
protein K08E4.6 protein.
Length = 234
Score = 81.4 bits (192), Expect = 6e-16
Identities = 64/219 (29%), Positives = 108/219 (49%), Gaps = 24/219 (10%)
Frame = +2
Query: 107 FTXLITII----NGVLSKSVELTFELPDSAEXCFYQTMD--KDTAASLEYQVISGGQYDV 268
FT +IT+I +L + T E+P CF+Q +D K ++YQVI GG D+
Sbjct: 4 FTNIITVILLITPFILCGEYDFTVEVPAGKFQCFFQPVDLAKHKTLEVDYQVIDGG--DL 61
Query: 269 SVKIEAPNRQIIYQQEKMQYD-SHQFTALASGDYKVCFSNEFSTFSHKLVYMELNVG--- 436
++ + I +Q++++ D SH+ GDY+VCF N FS S K+V+ E+ +
Sbjct: 62 NINFMILHGANILKQDQLKVDGSHRIELNQPGDYQVCFDNSFSYQSRKVVFFEIFLFDAH 121
Query: 437 ---PEQPLPGV----GDHATVLTQLETSAEEIH-------SALNRIIDHQTHHRLREAQG 574
E L + D + + +L + +E H + LN++ HQ R EA+
Sbjct: 122 GNLDEADLSAMARTDSDLSAKMNELGVTIDEFHRRANGIKNNLNKVEYHQALLRAHEARD 181
Query: 575 RKRAEDLNEKVFWWSMGETLAIVCVAFTQVMILKNFFSD 691
R ++V +WS+ TL +V VA QV ++++ F +
Sbjct: 182 RAVMSANFDRVTFWSVVHTLVMVGVAGVQVFMIRSLFEE 220
>AL117207-7|CAB60397.1| 211|Caenorhabditis elegans Hypothetical
protein Y60A3A.9 protein.
Length = 211
Score = 56.8 bits (131), Expect = 2e-08
Identities = 41/192 (21%), Positives = 87/192 (45%), Gaps = 13/192 (6%)
Frame = +2
Query: 158 LTFELPDSAEXCFYQTMDKDTAASLEYQV------ISG-GQYD---VSVKIEAPNRQIIY 307
L F + ++ + CF + + +T + Y+V G G Y + V+++ P ++I
Sbjct: 17 LYFHIAETEKKCFIEEIPDETMVTGNYKVQLYDPNTKGYGDYPNIGMHVEVKDPEDKVIL 76
Query: 308 QQEKMQYDSHQFTALASGDYKVC-FSNEFSTFS--HKLVYMELNVGPEQPLPGVGDHATV 478
+ FT+ G++ +C +SN + F+ V++++ G
Sbjct: 77 SKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDIQAGDHAQDYAQIAQKDK 136
Query: 479 LTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKVFWWSMGETLAIVCVAFT 658
L +L+ ++ +++I Q + R RE + R+ +E N +VF+WS+ + + +
Sbjct: 137 LNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSESTNSRVFYWSIAQVVVLAITGAW 196
Query: 659 QVMILKNFFSDK 694
Q+ L+ FF K
Sbjct: 197 QMRHLRGFFEAK 208
>U40417-1|AAA81411.1| 114|Caenorhabditis elegans Hypothetical
protein T08A9.6 protein.
Length = 114
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 142 KNTINYCN*XCKXKRSRKHFSINXKTFKXTKRFEDARL 29
K +I++CN K + +F+ FK T +FED RL
Sbjct: 74 KKSISFCNNGQKNRPLTFNFTSKRAVFKRTVKFEDLRL 111
>Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical
protein K11D9.2b protein.
Length = 1004
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3
Query: 387 SLLKHTL*SPDARAVNWCESYCIFS 313
S++KHT PD RAVN + C+FS
Sbjct: 188 SVIKHTDSVPDPRAVNQDKKNCLFS 212
>Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical
protein K11D9.2a protein.
Length = 1059
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3
Query: 387 SLLKHTL*SPDARAVNWCESYCIFS 313
S++KHT PD RAVN + C+FS
Sbjct: 188 SVIKHTDSVPDPRAVNQDKKNCLFS 212
>AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPase
protein.
Length = 1059
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3
Query: 387 SLLKHTL*SPDARAVNWCESYCIFS 313
S++KHT PD RAVN + C+FS
Sbjct: 188 SVIKHTDSVPDPRAVNQDKKNCLFS 212
>AC024801-12|AAF59643.4| 569|Caenorhabditis elegans Hypothetical
protein Y50D7A.8 protein.
Length = 569
Score = 28.7 bits (61), Expect = 4.7
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Frame = +2
Query: 347 ALASGDYKVCFSNEFSTFSHKLVYMELNVGPEQPLPGVGDHATVLTQLETS----AEEIH 514
A A Y+ NE ++H+ +L V PE G D V TQ++ + AE
Sbjct: 142 AAARSRYQRMTENERRVYNHRRRLKQLGVDPEH---GTNDVEGVRTQMKQANAKKAEAAR 198
Query: 515 SALNRIIDHQT---HHRLREAQGRKRAED 592
+R+ Q +HR EA R+R E+
Sbjct: 199 QRYHRMTPEQKRDYNHRRTEAFRRRRHEE 227
>Z92815-5|CAH10781.1| 313|Caenorhabditis elegans Hypothetical
protein F53F8.2 protein.
Length = 313
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/107 (21%), Positives = 44/107 (41%)
Frame = +2
Query: 8 IVICQSMQSRILKSFCXFKGFXINAKMFXAPLXFTXLITIINGVLSKSVELTFELPDSAE 187
+++ ++ S+ L+S C I F L FT +I + ++ +P + E
Sbjct: 25 LMVLVTLHSKNLRSIC---NMLICVCCFCDLLLFTDIIAFV---------VSMFIPITQE 72
Query: 188 XCFYQTMDKDTAASLEYQVISGGQYDVSVKIEAPNRQIIYQQEKMQY 328
CFY + D A + D + + AP R + + E+ +Y
Sbjct: 73 FCFYINIPADFGAFASNACVLAVGIDRLIAVAAPTRYKMLEHERYKY 119
>Z83116-6|CAB05565.2| 302|Caenorhabditis elegans Hypothetical
protein M01B2.7 protein.
Length = 302
Score = 28.3 bits (60), Expect = 6.3
Identities = 15/58 (25%), Positives = 25/58 (43%)
Frame = +2
Query: 173 PDSAEXCFYQTMDKDTAASLEYQVISGGQYDVSVKIEAPNRQIIYQQEKMQYDSHQFT 346
P + E CFY ++ D A + D + + AP R + + E+ +Y Q T
Sbjct: 68 PSTQEFCFYISIPADFGAFASNACVLAIGIDRLIAVAAPTRYKLLENERYKYLFLQMT 125
>Z81547-6|CAB04462.2| 313|Caenorhabditis elegans Hypothetical
protein F53F8.2 protein.
Length = 313
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/107 (21%), Positives = 44/107 (41%)
Frame = +2
Query: 8 IVICQSMQSRILKSFCXFKGFXINAKMFXAPLXFTXLITIINGVLSKSVELTFELPDSAE 187
+++ ++ S+ L+S C I F L FT +I + ++ +P + E
Sbjct: 25 LMVLVTLHSKNLRSIC---NMLICVCCFCDLLLFTDIIAFV---------VSMFIPITQE 72
Query: 188 XCFYQTMDKDTAASLEYQVISGGQYDVSVKIEAPNRQIIYQQEKMQY 328
CFY + D A + D + + AP R + + E+ +Y
Sbjct: 73 FCFYINIPADFGAFASNACVLAVGIDRLIAVAAPTRYKMLEHERYKY 119
>Z75544-2|CAC42316.1| 480|Caenorhabditis elegans Hypothetical
protein K02A11.1b protein.
Length = 480
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 109 KXKRSRKHFSINXKTFKXTKRFEDARLHRLTNDNCH 2
+ +R R HF+ + + T R + A + RL NDN +
Sbjct: 47 RPRRQRLHFAAEVELLEATCRADYAEVERLLNDNAN 82
>Z75544-1|CAA99881.1| 476|Caenorhabditis elegans Hypothetical
protein K02A11.1a protein.
Length = 476
Score = 28.3 bits (60), Expect = 6.3
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -2
Query: 109 KXKRSRKHFSINXKTFKXTKRFEDARLHRLTNDNCH 2
+ +R R HF+ + + T R + A + RL NDN +
Sbjct: 47 RPRRQRLHFAAEVELLEATCRADYAEVERLLNDNAN 82
>U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform a
protein.
Length = 2322
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/116 (19%), Positives = 52/116 (44%)
Frame = +2
Query: 326 YDSHQFTALASGDYKVCFSNEFSTFSHKLVYMELNVGPEQPLPGVGDHATVLTQLETSAE 505
++SH+ D + FS++ + H M + P+ G+G+ + +++ +
Sbjct: 198 FNSHEKNFELLIDTVMRFSDQLNEKPHLAEEMVRIIRPDIKKNGLGNMRELKKRMKLTMA 257
Query: 506 EIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKVFWWSMGETLAIVCVAFTQVMIL 673
+ A ++ + +T+ + E + +L E WS + IVC F +++IL
Sbjct: 258 LVKMAKSQKMLEETNQMISEM-----SIELEENGGKWSSASLITIVCDVFNELLIL 308
>U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform b
protein.
Length = 2019
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/116 (19%), Positives = 52/116 (44%)
Frame = +2
Query: 326 YDSHQFTALASGDYKVCFSNEFSTFSHKLVYMELNVGPEQPLPGVGDHATVLTQLETSAE 505
++SH+ D + FS++ + H M + P+ G+G+ + +++ +
Sbjct: 198 FNSHEKNFELLIDTVMRFSDQLNEKPHLAEEMVRIIRPDIKKNGLGNMRELKKRMKLTMA 257
Query: 506 EIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKVFWWSMGETLAIVCVAFTQVMIL 673
+ A ++ + +T+ + E + +L E WS + IVC F +++IL
Sbjct: 258 LVKMAKSQKMLEETNQMISEM-----SIELEENGGKWSSASLITIVCDVFNELLIL 308
>AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans
nonsense-mediated mRNA decay proteinSMG-1 protein.
Length = 2322
Score = 28.3 bits (60), Expect = 6.3
Identities = 23/116 (19%), Positives = 52/116 (44%)
Frame = +2
Query: 326 YDSHQFTALASGDYKVCFSNEFSTFSHKLVYMELNVGPEQPLPGVGDHATVLTQLETSAE 505
++SH+ D + FS++ + H M + P+ G+G+ + +++ +
Sbjct: 198 FNSHEKNFELLIDTVMRFSDQLNEKPHLAEEMVRIIRPDIKKNGLGNMRELKKRMKLTMA 257
Query: 506 EIHSALNRIIDHQTHHRLREAQGRKRAEDLNEKVFWWSMGETLAIVCVAFTQVMIL 673
+ A ++ + +T+ + E + +L E WS + IVC F +++IL
Sbjct: 258 LVKMAKSQKMLEETNQMISEM-----SIELEENGGKWSSASLITIVCDVFNELLIL 308
>AF040653-3|ABS83855.1| 390|Caenorhabditis elegans Hypothetical
protein K05F6.4 protein.
Length = 390
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 415 VYGTKCWTGAASSWCRRSCNCSYTVGDICRRNSFCTQQNH 534
++ T W+ A C RS + S + D R + FCT +H
Sbjct: 18 IFNTLPWSAIAVHPCLRSWHSSNSGADSKRADVFCTTHSH 57
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 440 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 589
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 440 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 589
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical
protein B0507.7 protein.
Length = 380
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/69 (23%), Positives = 34/69 (49%)
Frame = +2
Query: 401 SHKLVYMELNVGPEQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRK 580
S++ +E N ++ L + ++ Q++ + + L +I D +T H+L A G
Sbjct: 126 SNENTVLEKNSQEKKKLEKQDPNKFIIRQMDKDLKNKINKLRKITD-ETEHKLELANGLS 184
Query: 581 RAEDLNEKV 607
+ D N+K+
Sbjct: 185 KYADKNQKI 193
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 440 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 589
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 440 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 589
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical
protein JC8.10c protein.
Length = 502
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 440 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 589
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin
UNC-26C protein.
Length = 502
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 440 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 589
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 440 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 589
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +2
Query: 440 EQPLPGVGDHATVLTQLETSAEEIHSALNRIIDHQTHHRLREAQGRKRAE 589
EQP VG H L ETS H L+++ + GRK E
Sbjct: 255 EQPGVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGEFAIVNLLGRKEGE 304
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,692,596
Number of Sequences: 27780
Number of extensions: 317047
Number of successful extensions: 1056
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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