Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_B17
(777 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase Ogm4|Schizo... 117 2e-27
SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase Ogm2|Schizo... 107 1e-24
SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase Ogm1|Schi... 80 3e-16
SPCC794.03 |||amino acid permease, unknown 13|Schizosaccharomyce... 29 0.98
SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase Ubp8|Schizos... 29 0.98
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 28 1.7
SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|ch... 27 4.0
SPAC25G10.08 |||translation initiation factor eIF3b |Schizosacch... 26 5.2
>SPBC16C6.09 |ogm4|oma4|protein O-mannosyltransferase
Ogm4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 778
Score = 117 bits (281), Expect = 2e-27
Identities = 62/179 (34%), Positives = 102/179 (56%), Gaps = 2/179 (1%)
Frame = +2
Query: 242 EVGDGAPAENETEKPELMLTNKMNHSPSRIYLQLKIDVIAIGLL-ILALCTRLYKLDEPR 418
E+ D ++N T K + + + + S + L+ K +A L+ +L+ TR + L+ P
Sbjct: 22 ELTDTKSSDNVTPKQKSPNSTEEDVSLNLKTLKAKKFKLAFVLITVLSFITRFWNLNLPG 81
Query: 419 HIVFDELHYGRYVSLYTKGVFFFDAHPPLGKQLLYLAGSIAGYDGNFTFDRIGTPYTDN- 595
+VFDE+H+G++ S Y +G +FFD HPP K LL L +AGYDG++ FD IG Y DN
Sbjct: 82 EVVFDEVHFGKFASYYLQGKYFFDLHPPFAKLLLALVAKLAGYDGHYLFDNIGDNYKDNG 141
Query: 596 VPVKALRLVPAVSGSFLVLITYFLMLELSLHQWTAILAALLVLLENCFLXQSRFMLLES 772
VP +R PA+ S + + + +M E I+++ LVL +N + + R +LL++
Sbjct: 142 VPYVTIRAWPALLSSLVPPVVFLIMKESGYDLLACIVSSSLVLFDNAHVTEGRLILLDA 200
>SPAPB1E7.09 |ogm2|oma2|protein O-mannosyltransferase
Ogm2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 739
Score = 107 bits (258), Expect = 1e-24
Identities = 59/182 (32%), Positives = 96/182 (52%)
Frame = +2
Query: 230 NSHREVGDGAPAENETEKPELMLTNKMNHSPSRIYLQLKIDVIAIGLLILALCTRLYKLD 409
+ H E+ D E E K + + Y+ L ++ + L ++A R++K+
Sbjct: 19 SKHSEIEDEVANEKEELKDATKSALGEVKTNKKYYI-LGYFLVPLLLTVIAGFVRVWKIA 77
Query: 410 EPRHIVFDELHYGRYVSLYTKGVFFFDAHPPLGKQLLYLAGSIAGYDGNFTFDRIGTPYT 589
+ +++DE H+G++ S Y K F+FD HPPLGK L +AG + GYDG+F F G Y
Sbjct: 78 DSNVVIWDEAHFGKFASYYLKHEFYFDVHPPLGKMLNAVAGKLVGYDGSFDFSS-GATYP 136
Query: 590 DNVPVKALRLVPAVSGSFLVLITYFLMLELSLHQWTAILAALLVLLENCFLXQSRFMLLE 769
+++ K +RL A G+ + + YF L + A L L+V L+N SRF+LL+
Sbjct: 137 EDLNYKFMRLWNAAFGTLCIPLVYFTALNFNYSFLAATLCTLMVALDNHLATISRFILLD 196
Query: 770 SI 775
S+
Sbjct: 197 SM 198
>SPAC22A12.07c |ogm1|oma1|protein O-mannosyltransferase
Ogm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 893
Score = 80.2 bits (189), Expect = 3e-16
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Frame = +2
Query: 353 VIAIGLLILALCTRLYKLDEPRHIVFDELHYGRYVSLYTKGVFFFDAHPPLGKQLLYLAG 532
V+ I L ++A C R +L P +VF+EL Y Y Y D +PPLGK L L
Sbjct: 35 VVVIFLTVVAFCVRAQRLMNPAKVVFEELRYYNYAVDYVNNKLLMDVYPPLGKLLFSLVA 94
Query: 533 SIAG--YDGNFTFDRIGTPYTDNVPVKALRLVPAVSGSFLVLITYFLMLELSLHQWTAIL 706
++ G Y+ N T D G Y ++RL + GS LV + Y + + + A L
Sbjct: 95 ALTGNKYELN-TLDEPGQQYPFTDVAYSMRLFTCLLGSLLVPLMYGTVYFPTKSKTAASL 153
Query: 707 AALLVLLENCFLXQSRFMLLE 769
AAL V+ +N + SR++++E
Sbjct: 154 AALFVIFDNGLITMSRYIMIE 174
>SPCC794.03 |||amino acid permease, unknown 13|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 554
Score = 28.7 bits (61), Expect = 0.98
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 414 LAILYLMNYIMEDMFHYILRVSFFLMLIHHLANSCYI*LVV 536
L + L+N+I F YI RVS ++L+ + N ++ + V
Sbjct: 186 LLVCVLLNFIPPKWFRYIFRVSVAVILLDFVLNMIWLPIAV 226
>SPAC13A11.04c |ubp8||ubiquitin C-terminal hydrolase
Ubp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 449
Score = 28.7 bits (61), Expect = 0.98
Identities = 21/59 (35%), Positives = 26/59 (44%)
Frame = -1
Query: 693 H*CKDSSSIKKYVIKTRKLPDTAGTSLRAFTGTLSVYGVPIRSKVKFPSYPAILPARYN 517
H C ++IK+ V KLP T L+ F I +V SYPA L RYN
Sbjct: 318 HSCGSKNAIKQLVFD--KLPPTICMQLKRFEQNNFAMSTKIDKQV---SYPAFLRMRYN 371
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 408 MNLAILYLMNYIMEDMFHYILRVSFFLMLIHHL 506
++LA ++NY+ + M + LR SF L+ HL
Sbjct: 786 ISLAAEAIINYVYQSMLNSELRESFLAFLLQHL 818
>SPCC320.03 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 867
Score = 26.6 bits (56), Expect = 4.0
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 248 PLLDGNYMFSPNNCTPEVL 192
P LDG+Y+ +P+N P V+
Sbjct: 287 PTLDGSYLSNPSNSNPAVM 305
>SPAC25G10.08 |||translation initiation factor eIF3b
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 725
Score = 26.2 bits (55), Expect = 5.2
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 161 RKINKLRKEVTEPQEYSYSEK 223
RK+N+L K + P E+S+ E+
Sbjct: 125 RKLNQLEKAFSTPDEFSFEER 145
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,031,536
Number of Sequences: 5004
Number of extensions: 63783
Number of successful extensions: 176
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 375345278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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