Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_B16
         (587 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           31   0.021
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    31   0.028
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     26   1.0  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   5.5  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   5.5  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 31.5 bits (68), Expect = 0.021
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 362 WHEVKNQDGSSYYWNTITSETTWEQPDE 445
           W E   Q+G +YY N  T  T W +P E
Sbjct: 167 WEERSAQNGRTYYVNHYTKTTQWSRPTE 194



 Score = 24.6 bits (51), Expect = 2.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 334 TGHNFWVAFITSISPQHLVY 275
           T H F V F+ +I+P+HL Y
Sbjct: 578 TIHFFPVLFLAAINPEHLSY 597



 Score = 23.8 bits (49), Expect = 4.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +2

Query: 380 QDGSSYYWNTITSETTWEQP 439
           Q G  Y+++  T ++TW  P
Sbjct: 338 QQGQVYFYHIPTKQSTWHDP 357


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 31.1 bits (67), Expect = 0.028
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 38  YCEFCKCWFADNKVST-SFHENGKKHKDKVQEHISKLSKKSAK 163
           YC++C  +   +  S    H  G+KHKD V+ +  K  ++ A+
Sbjct: 5   YCDYCDTYLTHDSPSVRKTHCTGRKHKDNVKFYYQKWMEEQAQ 47


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +2

Query: 230 YIKDVQNNADLTSQNINQMLGGDGSNKSNPKIVASEIGTKSE 355
           Y+K VQN      + I    GG+ SNK+  K  A E G K E
Sbjct: 390 YVKLVQNQFGRKPRIIRSDQGGEYSNKALRKFCADE-GIKME 430


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 363 QIGSDLVPISLATIFGLLLLLP 298
           ++G  +VP+ L  +  LLL+LP
Sbjct: 12  RLGRRMVPLGLLGVTALLLILP 33


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -3

Query: 363 QIGSDLVPISLATIFGLLLLLP 298
           ++G  +VP+ L  +  LLL+LP
Sbjct: 12  RLGRRMVPLGLLGVTALLLILP 33


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,673
Number of Sequences: 2352
Number of extensions: 9983
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56347938
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)