Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_B15
         (738 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   3.4  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   7.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   7.9  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 521 RQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVN 634
           R + L + IGV  F++      VSN+   P++++   N
Sbjct: 41  RDVELIKQIGVKEFDSFHDHVSVSNTNTEPLLSEALTN 78


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
          protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/12 (41%), Positives = 7/12 (58%)
 Frame = +3

Query: 57 PSHVCCTQQWRC 92
          P H  C + W+C
Sbjct: 33 PHHTSCDKYWKC 44


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
          protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 5/12 (41%), Positives = 7/12 (58%)
 Frame = +3

Query: 57 PSHVCCTQQWRC 92
          P H  C + W+C
Sbjct: 33 PHHTSCDKYWKC 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,526
Number of Sequences: 336
Number of extensions: 3415
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)