Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_B15
(738 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 149 2e-36
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 145 2e-35
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 145 2e-35
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 135 4e-32
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 132 3e-31
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 126 2e-29
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 111 7e-25
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 110 9e-25
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 106 2e-23
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 105 3e-23
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 103 2e-22
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 103 2e-22
U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical pr... 61 9e-10
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 40 0.001
AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical ... 39 0.003
AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical ... 32 0.37
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 29 2.6
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 29 2.6
AL117207-15|CAB60407.2| 476|Caenorhabditis elegans Hypothetical... 29 2.6
AB049441-1|BAB15803.1| 450|Caenorhabditis elegans CeCHK2 protein. 29 2.6
AB041996-1|BAB20578.1| 476|Caenorhabditis elegans Ce-CDS-1 prot... 29 2.6
AF016414-4|AAG24021.2| 230|Caenorhabditis elegans Serpentine re... 28 6.0
AF016414-3|AAW88405.1| 329|Caenorhabditis elegans Serpentine re... 28 6.0
Z99281-3|CAB16508.1| 482|Caenorhabditis elegans Hypothetical pr... 28 7.9
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 149 bits (362), Expect = 2e-36
Identities = 81/211 (38%), Positives = 124/211 (58%), Gaps = 1/211 (0%)
Frame = +2
Query: 83 MAVQAPCIQLHAGXPLPXVALGTGRGTAKXSDSIXXVRQAVYWAIEAGYRHIDTAAVYQD 262
M+ + P L G +P + LGT + T + ++ +R AV AGYRHIDTA +YQ+
Sbjct: 1 MSSKVPIFTLSNGVLMPSIGLGTWQMTGEEGKTV--IRNAVL----AGYRHIDTATLYQN 54
Query: 263 EEQVGQGIAEAIANGLVTREELFVTTKLWNDKHARDQVVPALQESLKKLGLDYIDLYLIH 442
E Q+G +AE A G++ RE++F+TTK + + A D V AL+ SLK+L LDY+DLYL H
Sbjct: 55 EHQIGDALAELFAEGILKREDIFITTKAFCHEVAPDVVEEALRNSLKRLRLDYVDLYLAH 114
Query: 443 FPIATKPDDS-PDNIDYLETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVIN 619
P +TK D S ++ + W+G + LGL ++IGVSNFN +QI R+++ + +
Sbjct: 115 IPASTKDDGSFRSDVKVEDIWRGFEKVYGLGLTKAIGVSNFNESQIVRIMNIQKVPIHAS 174
Query: 620 QIEVNPTNTQEPLXAHCXSLGIAVMAYSPFG 712
Q+E++ Q+ C I + AY+ G
Sbjct: 175 QLELHLYLPQKAHRELCKKHNILITAYATLG 205
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 145 bits (352), Expect = 2e-35
Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 11/214 (5%)
Frame = +2
Query: 104 IQLHAGXPLPXVALGTGRGTAKXSDSIXXVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQG 283
++L++G +P + LGT + +K + V A+ A+ AGYRHID A VYQ++++VG+
Sbjct: 5 LKLNSGYSIPAIGLGTWQ--SKPGE----VAAAIKTAVAAGYRHIDCAHVYQNQKEVGEA 58
Query: 284 IAEAIANGLVTREELFVTTKLWNDKHARDQVVPALQESLKKLGLDYIDLYLIHFP--IAT 457
+ E + G V REELF+T+K+WN H+ + + L L L Y+DL LIH+P A
Sbjct: 59 LKEILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAE 118
Query: 458 KPDDSP---------DNIDYLETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRP 610
+ P ++DYLETW+ + A++ G RSIG+SNF +QI R+ + ++P
Sbjct: 119 GAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKP 178
Query: 611 VINQIEVNPTNTQEPLXAHCXSLGIAVMAYSPFG 712
Q+E++P TQ L C GI V+ YSP G
Sbjct: 179 ACLQVELHPYFTQVKLREFCKEKGIVVVGYSPLG 212
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 145 bits (352), Expect = 2e-35
Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 11/214 (5%)
Frame = +2
Query: 104 IQLHAGXPLPXVALGTGRGTAKXSDSIXXVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQG 283
++L++G +P + LGT + +K + V A+ A+ AGYRHID A VYQ++++VG+
Sbjct: 5 LKLNSGYSIPAIGLGTWQ--SKPGE----VAAAIKTAVAAGYRHIDCAHVYQNQKEVGEA 58
Query: 284 IAEAIANGLVTREELFVTTKLWNDKHARDQVVPALQESLKKLGLDYIDLYLIHFP--IAT 457
+ E + G V REELF+T+K+WN H+ + + L L L Y+DL LIH+P A
Sbjct: 59 LKEILDEGKVKREELFITSKVWNTFHSEAKAHENIDIILSDLQLSYVDLMLIHWPQGYAE 118
Query: 458 KPDDSP---------DNIDYLETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRP 610
+ P ++DYLETW+ + A++ G RSIG+SNF +QI R+ + ++P
Sbjct: 119 GAELFPAGENGKMRYSDVDYLETWKAFEAAQKAGKCRSIGLSNFTHSQIQRVWDAAEVKP 178
Query: 611 VINQIEVNPTNTQEPLXAHCXSLGIAVMAYSPFG 712
Q+E++P TQ L C GI V+ YSP G
Sbjct: 179 ACLQVELHPYFTQVKLREFCKEKGIVVVGYSPLG 212
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 135 bits (326), Expect = 4e-32
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 2/212 (0%)
Frame = +2
Query: 83 MAVQAPCIQLHAGXPLPXVALGTGRGTAKXSDSIXXVRQAVYWAIEAGYRHIDTAAVYQD 262
M+ I+L G +P + LGT + S V AV A++AGYR IDTA+VYQ+
Sbjct: 1 MSSATASIKLSNGVEMPVIGLGTWQS------SPAEVITAVKTAVKAGYRLIDTASVYQN 54
Query: 263 EEQVGQGIAEAIANGLVTREELFVTTKLWNDKHARDQVVPALQESLKKLGLDYIDLYLIH 442
EE +G I E + G+V REELF+TTK W + A ++ L+ESLKKL L+Y+DLYL H
Sbjct: 55 EEAIGTAIKELLEEGVVKREELFITTKAWTHELAPGKLEGGLRESLKKLQLEYVDLYLAH 114
Query: 443 FPIATKPDDSPDNIDYLE-TWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVIN 619
P A D S +E W+ + GLA+++GVSN+N QI+R ++ + PV N
Sbjct: 115 MPAAFNDDMSEHIASPVEDVWRQFDAVYKAGLAKAVGVSNWNNDQISRALALG-LTPVHN 173
Query: 620 -QIEVNPTNTQEPLXAHCXSLGIAVMAYSPFG 712
Q+E++ Q C I+V +Y+ G
Sbjct: 174 SQVELHLYFPQHDHVDFCKKHNISVTSYATLG 205
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 132 bits (318), Expect = 3e-31
Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 16/218 (7%)
Frame = +2
Query: 95 APCIQLHAGXPLPXVALGTGRGTAKXSDSIXXVRQAVYWAIEAGYRHIDTAAVYQDEEQV 274
A + L++G +P + G GT + ++ R V A+EAGYRHID+A ++++E+V
Sbjct: 4 ADTVTLNSGYEMPVI----GYGTWQLPKNLAAER--VRDALEAGYRHIDSALSFKNQEEV 57
Query: 275 GQGIAEAIANGLVTREELFVTTKLWNDKHARDQVVPALQESLKKLGLDYIDLYLIHFPIA 454
GI + V REELF+++K+WN H+R++ + + E L+ Y+DL +IH+P
Sbjct: 58 AAGIKDWCKIRKVRREELFLSSKIWNTYHSRNRCMQQIDEMLEIFETTYMDLIVIHWPFG 117
Query: 455 TKPDDSP----------------DNIDYLETWQGMQDARQLGLARSIGVSNFNATQITRL 586
D+ P ++DYLETW+ ++DA + G RSIG++NFN Q+ ++
Sbjct: 118 WAEDEPPGERGLWPRGANGKMRYSDVDYLETWKALEDAHRSGKIRSIGLANFNIGQVEQV 177
Query: 587 VSNSYIRPVINQIEVNPTNTQEPLXAHCXSLGIAVMAY 700
+ I+P + Q+E+NP QE + C GI + A+
Sbjct: 178 WTKGLIKPAVLQVEMNPFLDQEEIRQFCREKGIILTAF 215
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 126 bits (304), Expect = 2e-29
Identities = 75/215 (34%), Positives = 118/215 (54%), Gaps = 12/215 (5%)
Frame = +2
Query: 104 IQLHAGXPLPXVALGTGRGTAKXSDSIXXVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQG 283
I L+ G LP LGT + K + +A A++AGYR IDTA +YQ+E +G+
Sbjct: 6 IPLNTGAQLPLFGLGTWQ--VKDEAELTVALRA---ALDAGYRLIDTAHLYQNEHIIGKV 60
Query: 284 IAEAIANGLVTREELFVTTKLWNDKHARDQVVPALQESLKKLGLDYIDLYLIHFPIATKP 463
+ E I++G + RE++FVT+KL HA + V ++ LK L L+YIDLYLIH P K
Sbjct: 61 LHEYISSGKLKREDIFVTSKLPFTAHAPEDVPKCVESQLKALQLEYIDLYLIHCPFPFKH 120
Query: 464 DD------------SPDNIDYLETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIR 607
+ + I +++TW+ ++ + G +++GVSNF+ Q+ L + ++
Sbjct: 121 QEGSFAPLMENGELAVTEIAHIDTWRALEKLYKEGKLKALGVSNFSCNQLQALYDAAEVK 180
Query: 608 PVINQIEVNPTNTQEPLXAHCXSLGIAVMAYSPFG 712
P Q+E + Q+ L A C LG+ V AY+P G
Sbjct: 181 PANQQVECHIYWPQQELRALCKKLGVTVTAYAPLG 215
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 111 bits (266), Expect = 7e-25
Identities = 61/176 (34%), Positives = 100/176 (56%), Gaps = 2/176 (1%)
Frame = +2
Query: 191 VRQAVYWAIEAGYRHIDTAAVYQDEEQVGQGIAEAI-ANGLVTREELFVTTKLWNDKHAR 367
+RQ + + GYR IDTA VY +E ++G+ + + + ANGL RE++++T+KL
Sbjct: 27 LRQVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGL-KREDIWITSKLAPSNAGV 85
Query: 368 DQVVPALQESLKKLGLDYIDLYLIHFPIATKPDDSPDNIDY-LETWQGMQDARQLGLARS 544
+ +++ESL L ++Y+DL LIH+P ++ ++P N +E+W M + G RS
Sbjct: 86 KKARESIEESLSNLKVEYLDLLLIHWPGSSLKSENPANKKLRVESWNVMCEMMAEGKLRS 145
Query: 545 IGVSNFNATQITRLVSNSYIRPVINQIEVNPTNTQEPLXAHCXSLGIAVMAYSPFG 712
+GVSNF + L +S + P +NQ+E +P Q+ L +C I AYS G
Sbjct: 146 VGVSNFEICHLEELKKDSNVVPAVNQVEYHPHFHQDDLVKYCNENNIHFQAYSSLG 201
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 110 bits (265), Expect = 9e-25
Identities = 63/202 (31%), Positives = 113/202 (55%), Gaps = 3/202 (1%)
Frame = +2
Query: 107 QLHAGXPLPXVALGTGRGTAKXSDSIXXVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQGI 286
+L++G +P V GT + T + V A+ A+ AGYR DTA Y +E+++G+ +
Sbjct: 14 KLNSGYNIPFVGFGTYKVTGEN------VPPAIDAALTAGYRMFDTAKYYLNEKELGEAL 67
Query: 287 AEAIANGLVTREELFVTTKLWND-KHARDQVVPALQESLKKLGLDYIDLYLIHFPIATKP 463
+ ++R ++F+T+K + + K+ R+ ++ESL+ L DYID+YL+H+P
Sbjct: 68 KILLPKHGLSRSDVFLTSKFFPESKNCREACRGFVEESLQSLQTDYIDMYLVHYPKPNDS 127
Query: 464 D-DSPDNIDYLE-TWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVNP 637
D D +N +Y + ++ +++A+ G RSIGVSN+ + L + + + P NQ+E +P
Sbjct: 128 DNDDVNNAEYRKIAYEVLEEAKAAGKVRSIGVSNYEIVHLEELKTYAKVPPCANQLEYHP 187
Query: 638 TNTQEPLXAHCXSLGIAVMAYS 703
+ PL +C I A+S
Sbjct: 188 HFARIPLQKYCKEKNIFFQAFS 209
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 106 bits (254), Expect = 2e-23
Identities = 68/203 (33%), Positives = 103/203 (50%), Gaps = 3/203 (1%)
Frame = +2
Query: 104 IQLHAGXPLPXVALGTGRGTAKXSDSIXXVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQG 283
I+L+ G P + LGT + D + V A A+ AGYR DTA VY +E+++G
Sbjct: 3 IKLNTGYDCPLIGLGTYK---IIGDQVLPVLDA---ALTAGYRLFDTAKVYNNEKEIGDA 56
Query: 284 IAEAIANGLVTREELFVTTKLWNDKHARDQVVPALQESLKKLGLDYIDLYLIHFPIA-TK 460
+ + + RE++F+TTK+ + + V + ESL L YID+YLIH+P +
Sbjct: 57 LEILLPKHNLKREDIFITTKM--HPNTVENVKKLVDESLSLLKTSYIDMYLIHYPKSFDY 114
Query: 461 PDDSPDNIDY-LETWQGMQDARQLGLARSIGVSNFNATQITRLVS-NSYIRPVINQIEVN 634
D P N + TW + + + G RS+GVS+F + L P NQ+E +
Sbjct: 115 GDQDPMNKTLRIATWNDLWECKNAGKIRSVGVSSFEIRHLEELKDLGKNFPPCCNQVEYH 174
Query: 635 PTNTQEPLXAHCXSLGIAVMAYS 703
P T+E L +C S GI A+S
Sbjct: 175 PHFTREELKNYCKSEGIFFQAFS 197
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 105 bits (252), Expect = 3e-23
Identities = 72/204 (35%), Positives = 104/204 (50%), Gaps = 1/204 (0%)
Frame = +2
Query: 98 PCIQLHAGXPLPXVALGTGRGTAKXSDSIXXVRQAVYWAIEAGYRHIDTAAVYQDEEQVG 277
P L +P + LGT D++ ++ + GYR IDTA Y E+Q+G
Sbjct: 3 PTTVLSNNVEMPLIGLGTTHSGGYYHDAV------LHSIKKCGYRLIDTAKRYGVEKQLG 56
Query: 278 QGIAEAIANGLVTREELFVTTKLWNDKHARDQVVPALQESLKKLGLDYIDLYLIHFPIAT 457
A+ N V REE+F++TKLW D+V A Q S +KL DY+D+Y+IH P
Sbjct: 57 I----AVKNCSVPREEMFLSTKLW-PVDCGDEVYNAFQTSCEKLQTDYLDMYMIHMP--Q 109
Query: 458 KPDDSPDNIDYLE-TWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVN 634
PD + + E TW+ M+ + RSIGVSN++ + L+ + I P NQ+E++
Sbjct: 110 LPDWIVNQKETKEKTWRQMELLYEDEHVRSIGVSNYSIEDLDELLEFASILPHANQVELH 169
Query: 635 PTNTQEPLXAHCXSLGIAVMAYSP 706
P Q L +C LGI M Y P
Sbjct: 170 PWFHQADLKNYCDELGILTMGYCP 193
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 103 bits (246), Expect = 2e-22
Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 5/200 (2%)
Frame = +2
Query: 119 GXPLPXVALGTGRGTAKXSDSIXXVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQGIAEAI 298
G +P + LG R + + ++ A+++GYR DTA +Y++E +G + + +
Sbjct: 17 GYEMPKIGLGISRIETQQDLDV-----SIEAALKSGYRQFDTANLYKNETFLGNSLKKYL 71
Query: 299 ANGLVTREELFVTTKLWN-DKHARDQVVPALQESLKKLGLDYIDLYLIHFPI---ATKPD 466
+TRE++F+TTK+ +++ ++ L SL L DY+DL LIH+P D
Sbjct: 72 PQFGLTREDVFITTKVRTLNENTVEETEKQLANSLATLQTDYVDLLLIHYPRDRDTGNDD 131
Query: 467 DSPDNIDYLE-TWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVNPTN 643
D N + WQ ++ A++ G RSIGVSN+ + + + IRPV+NQ E P
Sbjct: 132 DYEINKSRRKIVWQTLEKAKESGRVRSIGVSNYEVYHLVEMFEYAKIRPVLNQYEYQPYL 191
Query: 644 TQEPLXAHCXSLGIAVMAYS 703
T+ L C I V +YS
Sbjct: 192 TRPTLKKFCDLNNIVVQSYS 211
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 103 bits (246), Expect = 2e-22
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 4/206 (1%)
Frame = +2
Query: 107 QLHAGXPLPXVALGTGRGTAKXSDSIXXVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQGI 286
+L G +P +ALGT AK V +A ++ GYR DTA Y++E+ +G +
Sbjct: 3 KLKNGQEIPKLALGTYE--AKGDQLFAAVDEA----LKVGYRSFDTAKYYENEKDLGLAL 56
Query: 287 AEAIANGLVTREELFVTTKL--WNDKHARDQVVPALQESLKKLGLDYIDLYLIHFPIATK 460
+ + E++++T+K+ ++ K+A + + + ESL+ L Y+DL L+H+P
Sbjct: 57 KTLLPRHNICSEDIYLTSKVFPYSSKNAAELIRKDVNESLELLDRKYLDLVLVHYPRPLD 116
Query: 461 PDDSPDNIDYL--ETWQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVN 634
+D +N +TW ++ G RSIGVSN+ I + S I P +NQIE +
Sbjct: 117 TEDLNENNKMYRKDTWIALEKLHAEGKIRSIGVSNYEPHHIEEMRSYITIEPQVNQIEYH 176
Query: 635 PTNTQEPLXAHCXSLGIAVMAYSPFG 712
P ++ L A+C I A+SP G
Sbjct: 177 PHFQRKVLRAYCNKNEILFQAFSPLG 202
>U39654-1|AAA80407.2| 131|Caenorhabditis elegans Hypothetical
protein C56G3.2 protein.
Length = 131
Score = 60.9 bits (141), Expect = 9e-10
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Frame = +2
Query: 347 WNDKHARDQVVPALQESLKKLGLDYIDLYLIHFPIATKPDDSPDNIDYLE-TWQGMQDAR 523
W ++ A ++ AL++SLKKL L+Y+DLYL H P A D S +E W+
Sbjct: 53 WTNELAPGRLEGALRDSLKKLHLEYVDLYLAHMPTAFSDDMSQKIESSVEDIWRQFDAVY 112
Query: 524 QLGLARSIGVSNFNATQI 577
+ GLA+++GVSN+N QI
Sbjct: 113 KAGLAKAVGVSNWNNDQI 130
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 59.3 bits (137), Expect = 3e-09
Identities = 34/75 (45%), Positives = 46/75 (61%)
Frame = +2
Query: 128 LPXVALGTGRGTAKXSDSIXXVRQAVYWAIEAGYRHIDTAAVYQDEEQVGQGIAEAIANG 307
+P V LGT + A+ V AV A++ GY IDTA+ Y +EE +G I E IA G
Sbjct: 56 MPAVGLGTWQSNAED------VISAVKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEG 109
Query: 308 LVTREELFVTTKLWN 352
+V RE+LF+TTK+ N
Sbjct: 110 VVKREDLFITTKVPN 124
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 40.3 bits (90), Expect = 0.001
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 14/186 (7%)
Frame = +2
Query: 47 LXITFTRLLHAAMAVQAPCIQLHAGXPLPXVALGTGRGT-----AKXSDSIXXVRQAVYW 211
L +T+ H AV+ + G + +G G DSI + V
Sbjct: 66 LPVTYIPRFHDESAVRRMNYRQIPGTDIRMSKIGFGAAAIGGMFGNVEDSIIKI---VET 122
Query: 212 AIEAGYRHIDTAAVYQDEEQVGQGIAEAIANGLVTREELFVTTKLWNDK--HAR------ 367
AI+ G +IDT Y + +A++ + R+ +++TK+ + +AR
Sbjct: 123 AIKQGINYIDTGYWYSQSRSESI-LGKALSK--IPRKAYYISTKVGRFELDYARTFDFRA 179
Query: 368 DQVVPALQESLKKLGLDYIDLYLIHFPIATKPDDSP-DNIDYLETWQGMQDARQLGLARS 544
D+++ +L SLK+L L YID+ + A D +P ++I ET Q ++ A+ G R
Sbjct: 180 DKILESLTNSLKRLQLTYIDICYVQIHDA---DFAPNESIVLYETLQALEMAKSSGKIRH 236
Query: 545 IGVSNF 562
IG++ +
Sbjct: 237 IGLTGY 242
>AC006627-8|AAK85458.1| 276|Caenorhabditis elegans Hypothetical
protein E01A2.1 protein.
Length = 276
Score = 39.1 bits (87), Expect = 0.003
Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Frame = +2
Query: 317 REELFVTTKLWN---DKHARDQVVPALQESLKKLGLDYIDLYLIHFPIATKPDDSPDNID 487
R+E+ +T K++ D DQ V +L+E LK ++ + L + + +N
Sbjct: 78 RDEIKITMKVFLSAWDVQQIDQAVTSLKEQLKTKDIEVLILSFPELDLIDGESEEDENNR 137
Query: 488 YLET----WQGMQDARQLGLARSIGVSNFNATQITRLVSNSYIRPVINQIEVN 634
+ E + M+ + SIGVS+F+A Q+ ++ + ++P IN + ++
Sbjct: 138 WFEKVKPLYTYMEKLVETSEIASIGVSDFSARQLKTIIDHFDVKPSINHVRLD 190
>AC024751-4|AAK21505.1| 425|Caenorhabditis elegans Hypothetical
protein Y18H1A.1 protein.
Length = 425
Score = 32.3 bits (70), Expect = 0.37
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 341 KLW--NDKHARDQVVPALQESLKKLGLDYIDLYLIHFPI 451
K W N K + + PAL +L KLG DY+++ L+ P+
Sbjct: 147 KTWKSNPKFNQSEDFPALDSNLVKLGKDYVNISLVDVPL 185
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 504 KACRTRGSWVWPGPLEYPTSTLRRSR 581
KA RG W WP P+ Y S RR +
Sbjct: 680 KAEEKRGDWKWPIPISYRDSEHRRKK 705
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 504 KACRTRGSWVWPGPLEYPTSTLRRSR 581
KA RG W WP P+ Y S RR +
Sbjct: 680 KAEEKRGDWKWPIPISYRDSEHRRKK 705
>AL117207-15|CAB60407.2| 476|Caenorhabditis elegans Hypothetical
protein Y60A3A.12 protein.
Length = 476
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Frame = +2
Query: 410 GLDYIDLYLIHFPIATKPDDSPDNIDYLETWQGMQDARQLGLARSIGVSNFNA---TQIT 580
G+ IDL HF DD+P N ++ Q A+ +GL R I F+ T+
Sbjct: 55 GISSIDLADDHFVCGRGSDDAPTNFNF------SQVAKDVGLYRFISKIQFSIDRDTETR 108
Query: 581 RLVSNSYIR--PVINQIEVNPTNTQEPLXAHCXSLGIAVM 694
R+ + + R ++NQ + ++E + S+GI +
Sbjct: 109 RIYLHDHSRNGTLVNQEMIGKGLSRELMNGDLISIGIPAL 148
>AB049441-1|BAB15803.1| 450|Caenorhabditis elegans CeCHK2 protein.
Length = 450
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Frame = +2
Query: 410 GLDYIDLYLIHFPIATKPDDSPDNIDYLETWQGMQDARQLGLARSIGVSNFNA---TQIT 580
G+ IDL HF DD+P N ++ Q A+ +GL R I F+ T+
Sbjct: 29 GISSIDLADDHFVCGRGSDDAPTNFNF------SQVAKDVGLYRFISKIQFSIDRDTETR 82
Query: 581 RLVSNSYIR--PVINQIEVNPTNTQEPLXAHCXSLGIAVM 694
R+ + + R ++NQ + ++E + S+GI +
Sbjct: 83 RIYLHDHSRNGTLVNQEMIGKGLSRELMNGDLISIGIPAL 122
>AB041996-1|BAB20578.1| 476|Caenorhabditis elegans Ce-CDS-1
protein.
Length = 476
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Frame = +2
Query: 410 GLDYIDLYLIHFPIATKPDDSPDNIDYLETWQGMQDARQLGLARSIGVSNFNA---TQIT 580
G+ IDL HF DD+P N ++ Q A+ +GL R I F+ T+
Sbjct: 55 GISSIDLADDHFVCGRGSDDAPTNFNF------SQVAKDVGLYRFISKIQFSIDRDTETR 108
Query: 581 RLVSNSYIR--PVINQIEVNPTNTQEPLXAHCXSLGIAVM 694
R+ + + R ++NQ + ++E + S+GI +
Sbjct: 109 RIYLHDHSRNGTLVNQEMIGKGLSRELMNGDLISIGIPAL 148
>AF016414-4|AAG24021.2| 230|Caenorhabditis elegans Serpentine
receptor, class h protein210, isoform a protein.
Length = 230
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 542 TWPDPAAARPACLARFPDSRCY 477
T PD A A PA L R P RC+
Sbjct: 158 TTPDQAVAGPAILQRLPTLRCF 179
>AF016414-3|AAW88405.1| 329|Caenorhabditis elegans Serpentine
receptor, class h protein210, isoform b protein.
Length = 329
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2
Query: 542 TWPDPAAARPACLARFPDSRCY 477
T PD A A PA L R P RC+
Sbjct: 158 TTPDQAVAGPAILQRLPTLRCF 179
>Z99281-3|CAB16508.1| 482|Caenorhabditis elegans Hypothetical
protein Y57G11C.6 protein.
Length = 482
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +2
Query: 341 KLW--NDKHARDQVVPALQESLKKLGLDYIDLYLIHFPI 451
K W N K+ + + PAL +L K+ DY+++ + P+
Sbjct: 204 KTWKANSKYNQSEDFPALDSNLLKVEKDYVNISRVEIPL 242
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,793,412
Number of Sequences: 27780
Number of extensions: 328477
Number of successful extensions: 890
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -