Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_B13
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   4.8  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.4  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.4  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   8.4  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
 Frame = +2

Query: 422 NQKLLQHHC---YVNCPLKL*VTAYHIIFYHILSLKSLYQHCVFIVEIYIYLCY 574
           N+  L+H+    +VN    + +   +  F  I+ LKS+ +  +  +EIY    Y
Sbjct: 89  NEPKLRHYLIFIFVNVFFWVIILMSNYAFTRIILLKSVLEIVIIDIEIYSQFLY 142


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 99  QLSVQVAASXSPKSGQPVVVHYTGTLTHGKKFDSS 203
           QL+V+ AA+   K G P      G  T+G+ F  S
Sbjct: 307 QLNVEHAANLWVKLGTPKEKLVIGMPTYGRTFTLS 341


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = -3

Query: 333 RKHSQESRLIWHAHLQTSLPHPHPSHGLLQIFR 235
           + H+    +IW   +   L    P +GLL++ +
Sbjct: 342 KDHNMAGLMIWTVDMDDFLGLCGPKNGLLEVIK 374


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 375 LIFDVELLRLE*IQFVTKNYYNIIVMSIAL*NSKSQLITL 494
           L   VE  R E I F+T+  Y+   + +AL       ITL
Sbjct: 42  LALGVERTRSELIPFLTETIYDEDEVLLALAEQLGSFITL 81


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,815
Number of Sequences: 336
Number of extensions: 3848
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)