Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_B13
(782 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 127 1e-29
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 120 1e-27
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 120 1e-27
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 99 2e-21
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 97 1e-20
02_05_0823 - 32036445-32036546,32036867-32036919,32037513-320375... 96 2e-20
06_03_1031 - 27018871-27018916,27018987-27019110,27019251-270193... 89 3e-18
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 87 1e-17
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 83 2e-16
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 81 7e-16
09_02_0288 + 6936867-6936879,6936965-6937038,6937445-6937588,693... 81 1e-15
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 69 3e-12
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42... 66 4e-11
01_05_0361 + 21377080-21377281,21378619-21378705,21379862-213801... 63 3e-10
01_05_0366 + 21419270-21419312,21420372-21420458,21420625-214209... 61 8e-10
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 58 6e-09
01_05_0367 + 21427130-21427136,21427733-21427822,21427927-214281... 49 4e-06
03_03_0065 + 14192725-14192813,14193004-14193088,14193971-141940... 48 1e-05
01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512... 42 4e-04
11_01_0294 + 2212807-2212876,2213664-2213843,2214505-2214594,221... 40 0.003
09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41... 40 0.003
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223... 39 0.005
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 39 0.005
07_01_0246 + 1809762-1809803,1810383-1810557,1810678-1810763,181... 34 0.15
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420... 33 0.19
11_04_0198 - 14751562-14751828,14751924-14752151 29 5.5
11_04_0199 - 14760005-14760265,14760361-14760594 28 7.3
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 28 7.3
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 127 bits (306), Expect = 1e-29
Identities = 58/100 (58%), Positives = 71/100 (71%)
Frame = +3
Query: 132 PKSGQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLT 311
P+SG V VHYTGTL G KFDSSRDRG PFKF +G+ EVI+GWDEG+ M GE+A T
Sbjct: 65 PESGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQGEVIKGWDEGIKTMKKGEQAVFT 124
Query: 312 CSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*IQFVTKN 431
P+ AYG+ G P IPPN+TL FDVELL ++ + K+
Sbjct: 125 VPPELAYGEAGSPPAIPPNATLRFDVELLSWASVKDICKD 164
Score = 57.6 bits (133), Expect = 1e-08
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Frame = +3
Query: 132 PKSGQPVVVHYTGTLTHGKKFDSS-RDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKL 308
P G V V + G L G F D +PF+FR + +VI G D V M GE A +
Sbjct: 298 PNDGAVVRVRFIGKLEDGTVFSKKGHDGDEPFEFRTDEEQVIEGLDRTVVTMKKGEVALV 357
Query: 309 TCSPDYAYGQ---QGHPGVIPPNSTLIFDVELLRLE 407
P +A+G + V+P NST+ ++VEL+ E
Sbjct: 358 RLPPQHAFGSTETKQDLAVVPANSTVWYEVELVSFE 393
Score = 46.8 bits (106), Expect = 2e-05
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 129 SPKSGQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKL 308
+PK V+V Y L G S+ G F + G + V M GE+ L
Sbjct: 180 NPKDLDEVLVKYEARLEDGTVV--SKSDGVEFAVKDGY--FCPALSKAVKTMKKGEKVLL 235
Query: 309 TCSPDYAYGQQGHP-----GVIPPNSTLIFDVELL 398
T P Y +G+QG P +PPN+TL D+ELL
Sbjct: 236 TVKPQYGFGEQGKPASGAEAAVPPNATLYVDLELL 270
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 120 bits (290), Expect = 1e-27
Identities = 55/100 (55%), Positives = 69/100 (69%)
Frame = +3
Query: 132 PKSGQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLT 311
P +G V VHYTGTL G KFDSSRDR PFKF +G+ +VI+GWD G+ M GE A T
Sbjct: 99 PDAGDEVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQGQVIKGWDLGIKTMKKGENAIFT 158
Query: 312 CSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*IQFVTKN 431
P+ AYG+ G P VIPPN+TL FDVEL+ E ++ + K+
Sbjct: 159 IPPELAYGEDGSPPVIPPNATLQFDVELISWESVKDICKD 198
Score = 58.0 bits (134), Expect = 8e-09
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Frame = +3
Query: 150 VVVHYTGTLTHGKKFDS-SRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDY 326
V V G L G F + D +PF+F+ + +V+ G D+ V M GE A +T P+Y
Sbjct: 354 VRVKLIGKLEDGTIFVTRGHDGDEPFEFKTDEDQVVEGLDKAVLSMKKGEVALVTIPPEY 413
Query: 327 AYGQ---QGHPGVIPPNSTLIFDVELLRLE 407
A+G + V+PPNST+ ++VEL+ +
Sbjct: 414 AFGSDETRQDLSVVPPNSTVYYEVELVSFD 443
Score = 41.1 bits (92), Expect = 0.001
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +3
Query: 228 FRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHP-----GVIPPNSTLIFDVE 392
+++ K + V M E+A LT P Y +G+QG P IPPN+TL ++E
Sbjct: 259 YKVLKGHFCPAISKAVKTMKKNEKALLTVKPQYGFGEQGRPAARDEAAIPPNATLHINLE 318
Query: 393 LL 398
L+
Sbjct: 319 LV 320
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 120 bits (289), Expect = 1e-27
Identities = 54/90 (60%), Positives = 65/90 (72%)
Frame = +3
Query: 129 SPKSGQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKL 308
+P+ G V VHYTGTL GKKFDSSRDRG PFKF++G+ +VI+GWD G+ M GE A
Sbjct: 60 TPEVGDEVEVHYTGTLLDGKKFDSSRDRGTPFKFKLGQGQVIKGWDLGIKTMKKGENAVF 119
Query: 309 TCSPDYAYGQQGHPGVIPPNSTLIFDVELL 398
T PD AYG+ G P IP ++TL FDVELL
Sbjct: 120 TIPPDLAYGESGSPPTIPASATLQFDVELL 149
Score = 66.9 bits (156), Expect = 2e-11
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Frame = +3
Query: 132 PKSGQPVVVHYTGTLTHGKKFDSS-RDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKL 308
P G V V TG L G F D +PF+F+ + EVI G D V M GE A +
Sbjct: 299 PNEGAVVKVKITGKLQDGTIFTKKGHDEPEPFEFKTDEEEVIDGIDRAVLNMKNGEVALV 358
Query: 309 TCSPDYAYG---QQGHPGVIPPNSTLIFDVELL 398
T P+YA+G + V+PPNST+I++VEL+
Sbjct: 359 TIPPEYAFGSTESKQDLAVVPPNSTVIYEVELV 391
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = +3
Query: 267 EGVAKMSVGERAKLTCSPDYAYGQQGHP-----GVIPPNSTLIFDVELL 398
+ V M E+ LT P Y +G+ G P G +PPN+TL+ ++EL+
Sbjct: 223 KAVKTMKKAEKVLLTVKPQYGFGENGRPAAGEEGAVPPNATLLVNLELV 271
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 99 bits (238), Expect = 2e-21
Identities = 44/86 (51%), Positives = 57/86 (66%)
Frame = +3
Query: 141 GQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 320
G + VHY G+LT G FDSS DRG PF+F +G +VI+GWD+G+ M VGE+ KL
Sbjct: 58 GDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGMCVGEKRKLKIPA 117
Query: 321 DYAYGQQGHPGVIPPNSTLIFDVELL 398
YG++G P IP +TLIFD EL+
Sbjct: 118 KMGYGERGSPPKIPGGATLIFDTELI 143
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 97.5 bits (232), Expect = 1e-20
Identities = 45/94 (47%), Positives = 56/94 (59%)
Frame = +3
Query: 117 AASXSPKSGQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGE 296
+ S G V VHY G LT G FDSS +RG P +F +G +VI+GWD+G+ M VGE
Sbjct: 141 SCSIQAHKGDRVKVHYRGKLTDGTDFDSSYERGDPIEFELGTGQVIKGWDQGILGMCVGE 200
Query: 297 RAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 398
+ KL YG QG P IP +TLIFD EL+
Sbjct: 201 KRKLKIPSKLGYGAQGSPPTIPGGATLIFDTELV 234
>02_05_0823 -
32036445-32036546,32036867-32036919,32037513-32037574,
32037804-32037837,32038144-32038231
Length = 112
Score = 96.3 bits (229), Expect = 2e-20
Identities = 49/102 (48%), Positives = 63/102 (61%), Gaps = 5/102 (4%)
Frame = +3
Query: 108 VQVAASXSPKSGQPVVVHYTGTLTHG---KKFDSSRDRGK-PFKFRIGKSEVIRGWDEGV 275
++ P GQ V VH TG KKF S++D G+ PF F IG+ VI+GWDEGV
Sbjct: 8 LKAGTGPKPVKGQKVTVHCTGFGKDNDLAKKFWSTKDAGQEPFSFNIGQGSVIKGWDEGV 67
Query: 276 AKMSVGERAKLTCSPDYAYGQQGHPG-VIPPNSTLIFDVELL 398
M VGE A++ C+PDYAYG G P I PNS L+F++E+L
Sbjct: 68 MTMQVGEVARIQCTPDYAYGASGFPAWGIRPNSVLVFEIEVL 109
>06_03_1031 -
27018871-27018916,27018987-27019110,27019251-27019311,
27019466-27019558,27019663-27020016
Length = 225
Score = 89.4 bits (212), Expect = 3e-18
Identities = 50/111 (45%), Positives = 62/111 (55%), Gaps = 14/111 (12%)
Frame = +3
Query: 114 VAASXSPKSGQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWD------EGV 275
V + + GQ + HYTG L G FDSS RGKP FR+G EVI+GWD EG+
Sbjct: 105 VGTGAAAEQGQLIKAHYTGRLEDGTVFDSSYKRGKPLTFRVGVGEVIKGWDQGIVGGEGI 164
Query: 276 AKMSVGERAKLTCSPDYAYGQQG------HPG--VIPPNSTLIFDVELLRL 404
M G + L P+ AYG +G P VIPPNSTL+FDVE+ R+
Sbjct: 165 PPMLAGGKRSLRLPPELAYGARGAGCRGWEPTSCVIPPNSTLLFDVEMFRV 215
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 87.4 bits (207), Expect = 1e-17
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Frame = +3
Query: 96 LQLSVQVAASXSPKSGQPVVVHYTGTLT-HGKKFDSSRDRGKPFKFRIGKSEVIRGWDEG 272
L +++ S + VHY GTL +G+ FD++ + F F IG+ VI+ WD
Sbjct: 106 LPRKIRIYKSIKASASTLSTVHYEGTLAENGEVFDTTHEDNSVFSFEIGEGTVIKAWDIA 165
Query: 273 VAKMSVGERAKLTCSPDYAYGQQGHPGVIPP---NSTLIFDVELL 398
V M VGE AK+TC P+YAYG G P IPP ++TL F+VEL+
Sbjct: 166 VKTMKVGEVAKITCKPEYAYGAAGSPPEIPPEVQSATLTFEVELI 210
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +3
Query: 129 SPKSGQPVV-VHYTGTLT-HGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERA 302
+P P+V VHY GTL +G+ FD++ + F F IG+ VI+ WD + M VGE A
Sbjct: 27 APTDSLPLVDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTMKVGEVA 86
Query: 303 KLTCSPDYAYGQQGHPGVIPPNSTLI 380
K+TC P+YAYG G P IPP S I
Sbjct: 87 KITCKPEYAYGSAGSPPEIPPKSVAI 112
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 81.4 bits (192), Expect = 7e-16
Identities = 42/86 (48%), Positives = 55/86 (63%)
Frame = +3
Query: 141 GQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 320
G+ V V Y G L +G FDS+ R + F FR+G EVI+GWD G+ M VG++ +LT P
Sbjct: 509 GKKVSVKYIGKLKNGTIFDSTVGR-RAFDFRLGIGEVIKGWDIGINGMRVGDKRRLTIPP 567
Query: 321 DYAYGQQGHPGVIPPNSTLIFDVELL 398
YG + G IP NSTL+FDVEL+
Sbjct: 568 SMGYGNK-RMGPIPQNSTLVFDVELV 592
>09_02_0288 +
6936867-6936879,6936965-6937038,6937445-6937588,
6937754-6937958,6938552-6938852,6938952-6939150,
6939393-6939477,6939554-6939595,6939676-6939724,
6939872-6939941,6940296-6940301
Length = 395
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/89 (41%), Positives = 58/89 (65%)
Frame = +3
Query: 138 SGQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCS 317
+G V + Y GTL GK +S+ KP+KF++G +VIRGWD G+ M VG++ KLT
Sbjct: 309 NGSKVSIKYVGTLQDGKIVESNVGE-KPYKFKLGAGKVIRGWDVGICGMRVGDKRKLTVP 367
Query: 318 PDYAYGQQGHPGVIPPNSTLIFDVELLRL 404
P YG + G +P NS++I+++EL+++
Sbjct: 368 PAMCYGSKA-IGEVPKNSSIIYEIELVKV 395
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 69.3 bits (162), Expect = 3e-12
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Frame = +3
Query: 108 VQVAASXSPKSGQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMS 287
++V SP G V +Y + +G+ FDSS ++G+P+ FR+G +VI+G DEG+ M
Sbjct: 153 IKVGEGPSPPIGFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMK 212
Query: 288 VGERAKLTCSPDYAY--GQQGHPG--VIPPNSTLIFDVELL 398
VG +L A+ G PG + P+S ++FDV LL
Sbjct: 213 VGGLRRLYIPGPLAFPKGLTSAPGRPRVAPSSPVMFDVNLL 253
>09_01_0022 +
426649-426663,427170-427420,427479-427577,428321-428473,
428893-429051,429146-429287,429460-429544,429629-429670,
429784-429832,430540-430639,431240-431287
Length = 380
Score = 65.7 bits (153), Expect = 4e-11
Identities = 36/89 (40%), Positives = 50/89 (56%)
Frame = +3
Query: 141 GQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 320
G+ V V Y L++G D + + KF++G EVI GWD G+ M VG +L P
Sbjct: 271 GKKVYVKYVCMLSNGDTVDPTGE-SSTCKFKLGAGEVISGWDLGIDGMRVGGIRRLGIPP 329
Query: 321 DYAYGQQGHPGVIPPNSTLIFDVELLRLE 407
YG G G IPPN+ L FD+ELL+++
Sbjct: 330 HLGYGDVGR-GNIPPNAWLNFDIELLKVK 357
>01_05_0361 +
21377080-21377281,21378619-21378705,21379862-21380134,
21380304-21380378,21380470-21380550,21380837-21381034,
21381145-21381234,21381310-21381467,21381619-21381741,
21381891-21382034,21382175-21382285,21382583-21382624,
21383043-21383261,21385319-21385627
Length = 703
Score = 62.9 bits (146), Expect = 3e-10
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Frame = +3
Query: 156 VHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYG 335
VH+TG G F S+R+ G P F +G+ V+RG+ V+ M GE+A T P+ A G
Sbjct: 68 VHFTGKRLDGTWFASTREDGVPLTFILGQENVMRGFSMAVSSMQAGEKAVFTIPPELA-G 126
Query: 336 QQGH-----PGVIPPNSTLIFDVELLRL 404
+ PG I PN L FD+EL+ L
Sbjct: 127 TKSRCPVDIPGNIAPNEALRFDIELISL 154
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Frame = +3
Query: 123 SXSPKSGQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERA 302
S P +V+Y L G S +F + + + V M+ GE A
Sbjct: 177 SDKPCDLDEALVNYNACLEDGMSVSMSEG----IEFNLAEGFFCPAFARAVETMTEGEEA 232
Query: 303 KLTCSPDYAYGQQGHPGV-----IPPNSTLIFDVELLRLE*IQFVTKN 431
L P+Y +G++G P + +PP++TL ++L+ + ++ + +N
Sbjct: 233 VLIVKPEYGFGERGRPSIGDEAGVPPDATLYVYLQLMSWKTVRHIGEN 280
>01_05_0366 +
21419270-21419312,21420372-21420458,21420625-21420900,
21421560-21421634,21421736-21421816,21422117-21422308,
21422756-21422772
Length = 256
Score = 61.3 bits (142), Expect = 8e-10
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Frame = +3
Query: 156 VHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYG 335
VH+TG L G +F SSR+ P +F +G+ +V+ G++ V+ M GE+A T
Sbjct: 15 VHFTGELVDGTQFVSSRENDIPERFILGQEDVMHGFNLAVSSMQPGEKAIFTIPSALTMT 74
Query: 336 QQGHPGV----IPPNSTLIFDVELLRL 404
+ G P IPPN TL F++EL+ +
Sbjct: 75 KAGSPASIPSNIPPNQTLRFEIELIAM 101
Score = 34.3 bits (75), Expect = 0.11
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = +3
Query: 150 VVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYA 329
V V Y L G +S + + +F + + V M GE A L P YA
Sbjct: 134 VFVKYDACLMDG----TSVSKSEGVEFSLTDGFFCPAFAHAVHTMKEGEEAVLIVKPKYA 189
Query: 330 YGQQGHP-----GVIPPNSTL 377
+G+QG P +PP++TL
Sbjct: 190 FGEQGRPSQGEEAAVPPDATL 210
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 58.4 bits (135), Expect = 6e-09
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Frame = +3
Query: 108 VQVAASXSPKSGQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVA--- 278
V+V P GQ + VHYT T G FDS+ RG+P R+G +++RG ++G++
Sbjct: 119 VEVGTGAQPPRGQLINVHYTARFTDGIVFDSTYKRGRPLTMRLGAGKILRGLEQGISGGG 178
Query: 279 ---KMSVGERAKLTCSPDYAYGQQ 341
M VG + KL AYG +
Sbjct: 179 GVPPMLVGGKRKLMIPATLAYGPE 202
>01_05_0367 +
21427130-21427136,21427733-21427822,21427927-21428105,
21429115-21429432,21430537-21430563
Length = 206
Score = 49.2 bits (112), Expect = 4e-06
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Frame = +3
Query: 168 GTLTHGKKFDSSRDRG--KPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAY--- 332
G L G FD R G +PF+F + + +VI G DE V M GE A+ T P +A+
Sbjct: 7 GKLQDGTVFDR-RGYGDDEPFEFVVDEGQVIDGLDESVMTMEEGEVAEFTIPPQHAFDAV 65
Query: 333 GQQGHP-GVIPPNSTLIFDVELL 398
G H +P N+T+++ +ELL
Sbjct: 66 GSDQHQFAFVPRNATVVYKIELL 88
>03_03_0065 +
14192725-14192813,14193004-14193088,14193971-14194040,
14194730-14194827,14194931-14195101,14196192-14196224,
14196762-14196820,14197143-14197190,14197399-14197480,
14198317-14198475,14199036-14199093,14199801-14199949,
14200403-14200503,14200574-14200643,14201088-14201147,
14201883-14201939,14202247-14202315,14202485-14202562,
14202996-14203097,14203203-14203274,14203361-14203648
Length = 665
Score = 47.6 bits (108), Expect = 1e-05
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Frame = +3
Query: 156 VHYTGTLTHGKK---FDSSRDR-GKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPD 323
VHY G L K +D+ D G+P +F G+ V G++ V M GE++ +TC PD
Sbjct: 333 VHYKGMLLDEPKSIFYDTRVDNHGEPLEFCSGEGLVPEGFEMCVRLMLPGEKSIVTCPPD 392
Query: 324 YAYGQQGH-PGVIPPNSTLIFDVELLRLE 407
+AY + P +P + + +++ELL E
Sbjct: 393 FAYDKFPRLPANVPEGAHVQWEIELLGFE 421
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Frame = +3
Query: 129 SPKSGQPVVVHYTGTLTHGKKFDSSR----DRGKPFKFRIGKSEVIRGWDEGVAKMSVGE 296
+P G V+VH T G +S+R +G P +F +GKS++I G+ EG M +GE
Sbjct: 52 TPAEGDQVIVHCTTRTIDGIIVNSTRREHGGKGVPLRFVLGKSKMILGFAEGFPTMLMGE 111
Query: 297 RA 302
A
Sbjct: 112 IA 113
Score = 31.5 bits (68), Expect = 0.78
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +3
Query: 183 GKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDY 326
GK+ S++ +P+ F IGKSEV +G + G+ M+ E+A + + Y
Sbjct: 226 GKELLPSKE--EPYFFTIGKSEVPKGLEMGIGSMAREEKAIIYVTSAY 271
>01_05_0359 +
21350580-21350829,21350990-21351064,21351156-21351236,
21352633-21352830,21352930-21353019,21353096-21353253,
21353350-21353472,21354989-21355096,21355530-21355826
Length = 459
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 150 VVVHYTGTLTHGKKFDSSRDRG-KPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDY 326
V V G L G FD +G +PF+F + + +V G +E V M GE + T P
Sbjct: 200 VGVRLIGKLHDGAVFDQRGHQGDEPFEFVVDEEQVSDGLEEAVLTMWEGEVSLFTIPPQC 259
Query: 327 AYGQQGHPGVIPPNSTLIFDVELL 398
Q V+PP S++ +++EL+
Sbjct: 260 LQDQHV---VVPPGSSVTYEIELV 280
Score = 33.5 bits (73), Expect = 0.19
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +3
Query: 273 VAKMSVGERAKLTCSPDYAYGQQGHPGVIP----PNSTLIFDVELLRL 404
V+ M GE+A T P+ A + P IP PN L FDVEL+ L
Sbjct: 3 VSSMQAGEKAVFTIPPELAGTKSRCPADIPANLPPNQALQFDVELISL 50
>11_01_0294 +
2212807-2212876,2213664-2213843,2214505-2214594,
2215054-2215238,2215399-2215521,2215593-2215745,
2216090-2216416
Length = 375
Score = 39.5 bits (88), Expect = 0.003
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +3
Query: 189 KFDSSRDRGKPFKFRIGKSEV-IRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGV--I 359
KF+ + P + IGK + + G GV M GERA L + YG++G +
Sbjct: 96 KFEDTWQEQHPIELVIGKEKKQMSGLGIGVGNMRSGERALLHVGWELGYGKEGSFSFPNV 155
Query: 360 PPNSTLIFDVELL 398
PP + L+++VEL+
Sbjct: 156 PPMADLLYEVELI 168
>09_01_0020 +
413723-413738,413867-413934,414849-415144,415275-415400,
415484-415566,416514-416628,416755-416847,416963-417021,
417609-417684,417812-417901,418050-418202,418294-418480,
418752-418839,419077-419125,419233-419329
Length = 531
Score = 39.5 bits (88), Expect = 0.003
Identities = 29/89 (32%), Positives = 41/89 (46%)
Frame = +3
Query: 141 GQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSP 320
G+ V V Y G L +G+ D + FR+G M VG + +LT P
Sbjct: 452 GKQVCVRYCGRLINGEVIDPTNLDDDTHTFRLG--------------MRVGGKRRLTIPP 497
Query: 321 DYAYGQQGHPGVIPPNSTLIFDVELLRLE 407
YG P IP NS L+++VELL ++
Sbjct: 498 AQGYGDVATPK-IPANSWLVYEVELLEVK 525
>12_01_0295 +
2235209-2235263,2236182-2236361,2236478-2236567,
2236947-2237131,2237200-2237358,2237437-2237589,
2237938-2238264
Length = 382
Score = 38.7 bits (86), Expect = 0.005
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Frame = +3
Query: 156 VHYTGTLTHGK-KFDSSRDRGKPFKFRIGKSEV-IRGWDEGVAKMSVGERAKLTCSPDYA 329
VHY + KF+ + + +GK + + G GV+ M GERA L + +
Sbjct: 79 VHYRAWVQGSSHKFEDTWQEQHSIELVLGKEKKEMTGLGIGVSNMRSGERALLHVNWELG 138
Query: 330 YGQQGHPGV--IPPNSTLIFDVELLRLE*IQFVTK 428
YG++G +PP + L+++VEL+ + ++ V +
Sbjct: 139 YGKEGSFSFPNVPPMADLVYEVELIGFDDVKEVPR 173
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 38.7 bits (86), Expect = 0.005
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Frame = +3
Query: 93 LLQLSVQVAASXSPKSGQPVVVHYTGTLTHGKKFDSSRDRGKPFKFRI----GKSEVI-- 254
LL ++V SPK GQ V+ HY G G++ DS+ +G R GK +I
Sbjct: 64 LLYEDIKVGTGNSPKDGQQVIFHYVGYNESGRRIDSTYIQGFEEGIRDMKPGGKRRIIIP 123
Query: 255 --RGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*IQFVTK 428
G + V K + + + +A G +FD+ELL ++ Q T
Sbjct: 124 PELGPPDTVGKALLKISSIIKIEDVFAGTLVGPSTFFSAKQFEVFDIELLAVQDCQRRTI 183
Query: 429 NYYNIIVMS 455
+Y+ +V S
Sbjct: 184 AFYSDVVCS 192
>07_01_0246 +
1809762-1809803,1810383-1810557,1810678-1810763,
1810871-1810921,1811003-1811146,1811299-1811343,
1811578-1811633,1811744-1811819,1811908-1812006
Length = 257
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 222 FKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNST 374
FKF+IG +VI ++E ++ M+ G ++ PD Y + + P +T
Sbjct: 173 FKFKIGSGQVIPAFEEAISDMAPGGVRRIIVPPDLGYPDNDYNKLGPKPTT 223
>01_05_0372 +
21541220-21541457,21541832-21541912,21542027-21542092,
21543050-21543178,21544619-21544674,21545451-21545732
Length = 283
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Frame = +3
Query: 282 MSVGERAKLTCSPDYAYGQQGHPGVIP----PNSTLIFDVELLRLE*IQFVTKN 431
M GERA T P A + G P IP P TL F++EL+ L I + +N
Sbjct: 1 MRPGERAIFTIPPKLAITKSGSPASIPSSIPPEQTLRFEIELISLFAITDILEN 54
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Frame = +3
Query: 273 VAKMSVGERAKLTCSPDYAYGQQGH-----PGVIPPNSTLIFDVEL 395
V M GE A P YA+G QG +PP++TL V+L
Sbjct: 112 VKTMREGEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATLYLYVQL 157
>11_04_0198 - 14751562-14751828,14751924-14752151
Length = 164
Score = 28.7 bits (61), Expect = 5.5
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 5/76 (6%)
Frame = +3
Query: 144 QPVVV-HYTGTLTH----GKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKL 308
QPV H TG + H SS D G + + G E I+ G K + ++ ++
Sbjct: 54 QPVKEEHKTGGILHRSGSSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGNKGNNQQQQQM 113
Query: 309 TCSPDYAYGQQGHPGV 356
+ AYGQQGH G+
Sbjct: 114 MGNTGGAYGQQGHAGM 129
>11_04_0199 - 14760005-14760265,14760361-14760594
Length = 164
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Frame = +3
Query: 159 HYTGTLTH----GKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKMSVGERAKLTCSPDY 326
H TG + H SS D G + + G E I+ G K + ++ ++ +
Sbjct: 62 HKTGGILHRSGSSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGNKGNNHQQQQMMGNTGG 121
Query: 327 AYGQQGHPGV 356
AYGQQGH G+
Sbjct: 122 AYGQQGHAGM 131
>08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +3
Query: 273 VAKMSVGERAKLTCSPDYAYGQQGHPGVIPPNSTL 377
+AK+ VGE + CSP+ +Y + H GVI +T+
Sbjct: 922 LAKLEVGEFCSV-CSPNCSYLTRKHLGVIASRATM 955
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,124,453
Number of Sequences: 37544
Number of extensions: 352243
Number of successful extensions: 777
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 755
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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