Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_B12
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_01_0585 - 5237547-5237930,5237995-5238072,5238163-5238405,523... 163 9e-41
01_01_0629 - 4738519-4738607,4738700-4738828,4738921-4739011,473... 163 1e-40
01_06_0551 + 30159789-30159946,30160509-30160629,30160714-301607... 159 1e-39
01_06_0670 + 31069976-31070073,31070461-31070581,31070669-310707... 159 3e-39
10_08_0551 + 18702081-18702251,18702328-18702424,18702533-187026... 123 1e-28
02_05_0228 - 27010982-27011272,27011401-27011506,27011616-270117... 117 1e-26
07_03_0474 + 18534071-18534238,18534349-18534445,18534992-185351... 95 6e-20
05_05_0165 + 22851863-22852566,22852811-22852964,22853112-228532... 31 0.87
08_01_0017 + 132109-132924 31 1.1
11_08_0005 + 27536091-27536761,27539697-27539890,27540097-275402... 30 2.0
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 30 2.0
03_06_0416 - 33780911-33781861 29 4.6
12_01_0725 + 6428572-6428817 28 8.1
>05_01_0585 -
5237547-5237930,5237995-5238072,5238163-5238405,
5238515-5238661,5238780-5238863,5238969-5239040,
5239153-5239248,5239345-5239410,5239537-5239642,
5239749-5239900,5240238-5240433,5240791-5240879
Length = 570
Score = 163 bits (397), Expect = 9e-41
Identities = 74/142 (52%), Positives = 101/142 (71%)
Frame = +2
Query: 68 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 247
SG L+ P NKG+AF+ ER + GLLPP + +QE Q + ++ Y PL +YI
Sbjct: 30 SGYTLLRDPRHNKGLAFSEAERDAHYLRGLLPPSIVSQELQEKKLMHNLRNYTVPLQRYI 89
Query: 248 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 427
+M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG +
Sbjct: 90 AMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKI 149
Query: 428 YDVLKNWPETDVRAIVVTDGER 493
+VLKNWPE ++ IVVTDGER
Sbjct: 150 LEVLKNWPERSIQVIVVTDGER 171
>01_01_0629 -
4738519-4738607,4738700-4738828,4738921-4739011,
4739103-4739177,4739529-4739618,4739742-4739840,
4739934-4739987,4740084-4740131,4740232-4740330,
4740458-4740541,4740650-4740721,4740812-4740907,
4741012-4741077,4741148-4741253,4741350-4741501,
4741634-4741708,4741792-4741912,4742968-4743209,
4743328-4743381
Length = 613
Score = 163 bits (396), Expect = 1e-40
Identities = 72/142 (50%), Positives = 105/142 (73%)
Frame = +2
Query: 68 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 247
SG L+ P NKG+AF+ +ER + GLLPP V +Q+ QV+ ++ +Y PL +Y+
Sbjct: 99 SGYTLLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVPLQRYM 158
Query: 248 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 427
+M L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++R+P+GL++++ DKG V
Sbjct: 159 AMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKV 218
Query: 428 YDVLKNWPETDVRAIVVTDGER 493
DVL+NWPE +++ IVVTDGER
Sbjct: 219 LDVLRNWPERNIQVIVVTDGER 240
>01_06_0551 +
30159789-30159946,30160509-30160629,30160714-30160788,
30160877-30161028,30161103-30161208,30161298-30161363,
30161623-30161694,30161849-30161932,30162108-30162206,
30162841-30162888,30162986-30163039,30163137-30163235,
30163321-30163410,30163503-30163580,30163699-30163773,
30163866-30163956,30164282-30164410,30164501-30164589
Length = 561
Score = 159 bits (387), Expect = 1e-39
Identities = 71/142 (50%), Positives = 101/142 (71%)
Frame = +2
Query: 68 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 247
SG + L+ P NKG+AF ER+ + GLLPP + +QE Q +I +Y+ PL KY+
Sbjct: 53 SGYNLLRDPRYNKGLAFNERERETHYLRGLLPPAIVSQELQERKIMHNIRQYQLPLQKYM 112
Query: 248 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 427
+M L + NE LFY+ + DNV E++P+VYTPTVG ACQK+G ++ RP+GL+I++ +KG +
Sbjct: 113 AMMDLQEGNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFSRPQGLYISLKEKGKI 172
Query: 428 YDVLKNWPETDVRAIVVTDGER 493
+VLKNWPE ++ IVVTDGER
Sbjct: 173 LEVLKNWPERSIQVIVVTDGER 194
>01_06_0670 +
31069976-31070073,31070461-31070581,31070669-31070743,
31070863-31071014,31071171-31071276,31071409-31071474,
31071562-31071657,31071764-31071835,31071925-31072008,
31072147-31072245,31072721-31072768,31072857-31072910,
31072991-31073089,31073182-31073271,31073371-31073448,
31073584-31073658,31073806-31073896,31074014-31074142,
31074235-31074323
Length = 573
Score = 159 bits (385), Expect = 3e-39
Identities = 70/142 (49%), Positives = 104/142 (73%)
Frame = +2
Query: 68 SGLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYENPLNKYI 247
SG L+ P NKG++FT +ER + GLLPP V +QE Q + ++ +++ PL +Y+
Sbjct: 33 SGHSLLRDPRHNKGLSFTEKERDAHYLRGLLPPVVLSQELQEKRLLQNVRQFQVPLQRYM 92
Query: 248 YLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHV 427
LM L +RNE LFY+ + DNV E++P+VYTPTVG ACQK+G ++RRP+GL+I++ +KG +
Sbjct: 93 ALMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGRI 152
Query: 428 YDVLKNWPETDVRAIVVTDGER 493
++L+NWPE ++ IVVTDGER
Sbjct: 153 LELLRNWPEKSIQVIVVTDGER 174
>10_08_0551 +
18702081-18702251,18702328-18702424,18702533-18702651,
18702757-18702924,18703296-18703424,18703659-18703719,
18703813-18703916,18704173-18704279,18704319-18704493,
18704657-18704770,18704883-18704966,18705536-18705608,
18705689-18705775,18705863-18705917,18706007-18706078,
18706470-18706532,18706640-18706754,18706844-18706915
Length = 621
Score = 123 bits (297), Expect = 1e-28
Identities = 65/151 (43%), Positives = 87/151 (57%), Gaps = 10/151 (6%)
Frame = +2
Query: 71 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVELCKLSIDRYEN------- 229
G D L P NK AF + ER LG+ GLLPPRV + E+Q + S E+
Sbjct: 46 GTDILHDPWFNKDTAFPMTERDRLGLRGLLPPRVMSFEQQYDRFINSFRSLEHNTRGEPD 105
Query: 230 ---PLNKYIYLMGLLDRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLF 400
L K+ L L DRNE L+YR + DN+ + PI+YTPTVGL C+ + ++RRPRG++
Sbjct: 106 TIVALAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCENYSGLFRRPRGMY 165
Query: 401 ITIHDKGHVYDVLKNWPETDVRAIVVTDGER 493
+ DKG + ++ NWP V IVVTDG R
Sbjct: 166 FSAKDKGEMMSMIYNWPAEKVDMIVVTDGSR 196
>02_05_0228 -
27010982-27011272,27011401-27011506,27011616-27011767,
27011919-27011930
Length = 186
Score = 117 bits (281), Expect = 1e-26
Identities = 46/76 (60%), Positives = 64/76 (84%)
Frame = +2
Query: 266 DRNEHLFYRFVADNVAEMMPIVYTPTVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKN 445
+R+E LFY+ + DNV E++P+VYTPTVG ACQK+G +YRRP+GL+I++ DKG + +VLKN
Sbjct: 5 ERSERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKDKGKILEVLKN 64
Query: 446 WPETDVRAIVVTDGER 493
WPE ++ IV+TDGER
Sbjct: 65 WPERSIQVIVITDGER 80
>07_03_0474 +
18534071-18534238,18534349-18534445,18534992-18535122,
18535191-18535286,18535459-18535464,18535521-18535688,
18535892-18536020,18536613-18536673,18536928-18537031,
18537137-18537220,18538433-18538461,18538506-18538617,
18539200-18539313,18539767-18539832,18540237-18540309,
18540396-18540482,18540710-18540764,18540869-18540940,
18541039-18541101,18541177-18541294,18541377-18541451
Length = 635
Score = 94.7 bits (225), Expect = 6e-20
Identities = 61/171 (35%), Positives = 87/171 (50%), Gaps = 10/171 (5%)
Frame = +2
Query: 11 ERDRIGLWGSGDGQPTSGLSGLDHLKHPGLNKGMAFTIEERQL------LGIHGLLPPRV 172
ERDR+GL G S +D P L F E + + L + P
Sbjct: 64 ERDRLGLRGLLPPNVVSSQQQIDRFT-PTLKYQYKFHSEIQHIDAKGLALNYLNISPAIC 122
Query: 173 KTQEEQVELCKLSIDRYEN--PLNKYIYLMGLLDRNEHLFYR--FVADNVAEMMPIVYTP 340
++ + V K + D + PL K+ L L DRNE ++Y+ + DN+ E PIVYTP
Sbjct: 123 ESSQYCVNADKYARDGPSDTYPLAKWRILNRLHDRNETMYYKAEVLIDNIEEHAPIVYTP 182
Query: 341 TVGLACQKFGLVYRRPRGLFITIHDKGHVYDVLKNWPETDVRAIVVTDGER 493
TVGL CQ + ++RRPRG++ + D+G + ++ NWP V IVVTDG R
Sbjct: 183 TVGLVCQNYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSR 233
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 71 GLDHLKHPGLNKGMAFTIEERQLLGIHGLLPPRVKTQEEQVE 196
G D L P N+G F++ ER LG+ GLLPP V + ++Q++
Sbjct: 45 GSDILHDPWFNRGTGFSMTERDRLGLRGLLPPNVVSSQQQID 86
>05_05_0165 +
22851863-22852566,22852811-22852964,22853112-22853261,
22853769-22853930,22854070-22854242,22854330-22854396,
22854556-22854722,22855216-22855374,22856187-22856276,
22856392-22856483,22856587-22856681,22857328-22857405,
22858364-22858459,22859132-22859206,22859290-22859381,
22859462-22859624,22859734-22859794,22860016-22860116,
22860567-22860614
Length = 908
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 108 PLLRPGCLRWSRPERPL--VGCPSPEPHNPIRSRSIS 4
PL PGC R R R L + PSP P + RS+S+S
Sbjct: 22 PLRSPGCRRRRRRGRVLSALSSPSPSPSSASRSQSVS 58
>08_01_0017 + 132109-132924
Length = 271
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = -3
Query: 243 YLLSGFSYLSIESLHSSTCSSC 178
YL +GFS+ S +S HSSTCS C
Sbjct: 84 YLSAGFSFASRDS-HSSTCSCC 104
>11_08_0005 +
27536091-27536761,27539697-27539890,27540097-27540255,
27540385-27541493
Length = 710
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 322 ANCVHSDGWPGLSEVRACVPPTKGPLHHDPR*GTCIRCS*ELAGDGRPR-HCCNRRRTLT 498
AN + DG+ + E + + G HD G +C GDG+ C+ + +
Sbjct: 279 ANATNGDGYLYIDECKEPDRCSTGSRCHDTEGGYYCKCRFPRRGDGKINGKGCHLPKDIV 338
Query: 499 LTKHTANNVIFLVY 540
+T T VIFLV+
Sbjct: 339 VTLATVCIVIFLVF 352
>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
Length = 514
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = -3
Query: 144 PKS*RSSMVKAMPLLRPGCLRWSRPERPLVG-CPSPEPHNPIRS 16
P+S SS K +PL RP SRPE P S P P S
Sbjct: 217 PQSSHSSYSKILPLFRPKSNSRSRPESPAASDAASQTPFRPTES 260
>03_06_0416 - 33780911-33781861
Length = 316
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = -1
Query: 398 RGPLVGGTQARTSDRPGQPSECTQLASFQPRYPRRNGRTDAHCGPRAP 255
R P GGT +R + P P+ P P R GR PRAP
Sbjct: 17 RSPTAGGTPSRLAVAPPSPTTPQCAIPASPHTPGR-GRAPPPATPRAP 63
>12_01_0725 + 6428572-6428817
Length = 81
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = -3
Query: 132 RSSMVKAMPLLRP-GCLRWSRPERPLVGCPSPEP-HNP 25
R+ V+ P++ P GC R E CP+P P H+P
Sbjct: 44 RALQVRPSPVVEPSGCCSGHRSEAVASWCPNPTPCHDP 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,282,061
Number of Sequences: 37544
Number of extensions: 419744
Number of successful extensions: 1137
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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