Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_B11
(802 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical pr... 339 1e-93
D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1 pr... 334 4e-92
U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical p... 304 5e-83
U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical p... 304 5e-83
D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2 pr... 304 5e-83
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 29 3.9
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 29 3.9
AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical ... 29 5.1
Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical p... 28 6.8
Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical p... 28 6.8
Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical p... 28 6.8
Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical p... 28 6.8
Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical pr... 28 6.8
AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical... 28 6.8
AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical ... 28 6.8
AB011282-1|BAA24962.1| 210|Caenorhabditis elegans GAP-2-6 protein. 28 6.8
AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein. 28 6.8
AB011279-1|BAA24959.1| 594|Caenorhabditis elegans GAP-2-3 protein. 28 6.8
AB011278-1|BAA24958.1| 280|Caenorhabditis elegans GAP-2-2 protein. 28 6.8
Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 28 8.9
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 28 8.9
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 28 8.9
Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical p... 28 8.9
Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical pr... 28 8.9
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 8.9
AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical ... 28 8.9
>Z81115-1|CAB03291.1| 365|Caenorhabditis elegans Hypothetical
protein T05D4.1 protein.
Length = 365
Score = 339 bits (834), Expect = 1e-93
Identities = 162/239 (67%), Positives = 191/239 (79%)
Frame = +3
Query: 81 MSTYFQYPTPELQEELKXXAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 260
M++Y Q+ T ++EL+ A AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 261 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 440
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 441 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQS 620
E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A+ LARYASICQ
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLARYASICQQ 180
Query: 621 QRIVPIVEPEVLPDGEHDLXRAXKVTEVVLAAVYKALNDHHVYLEGTLLKPNMVTXGQS 797
+VPIVEPE+LPDGEH L R K+TE VL+ VY ALN+HHV+LEGTLLKPNMVT GQS
Sbjct: 181 NGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSGQS 239
>D83738-1|BAA12091.1| 366|Caenorhabditis elegans aldolase Ce1
protein.
Length = 366
Score = 334 bits (821), Expect = 4e-92
Identities = 161/240 (67%), Positives = 191/240 (79%), Gaps = 1/240 (0%)
Frame = +3
Query: 81 MSTYFQYPTPELQEELKXXAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYR 260
M++Y Q+ T ++EL+ A AIV P KGILAADESTG+M KRL IG+ENTEENRR+YR
Sbjct: 1 MASYSQFLTKAQEDELRSIANAIVTPGKGILAADESTGSMDKRLNSIGLENTEENRRKYR 60
Query: 261 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 440
QLLF++ A L++ ISGVI+FHET YQK DDG P +LL+++GIIPGIKVDKGVVP+ G+
Sbjct: 61 QLLFTAGADLNKYISGVIMFHETFYQKTDDGKPFTALLQEQGIIPGIKVDKGVVPMAGTI 120
Query: 441 DECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENA-NVLARYASICQ 617
E TTQGLDDL RCAQYKKDG FAKWRCV KI TPS A++E A N+ +RYASICQ
Sbjct: 121 GEGTTQGLDDLNARCAQYKKDGAQFAKWRCVHKISSTTPSVTALKEIASNLGSRYASICQ 180
Query: 618 SQRIVPIVEPEVLPDGEHDLXRAXKVTEVVLAAVYKALNDHHVYLEGTLLKPNMVTXGQS 797
+VPIVEPE+LPDGEH L R K+TE VL+ VY ALN+HHV+LEGTLLKPNMVT GQS
Sbjct: 181 QNGLVPIVEPEILPDGEHCLARGQKITETVLSYVYHALNEHHVFLEGTLLKPNMVTSGQS 240
>U13070-15|AAC46646.1| 366|Caenorhabditis elegans Hypothetical
protein F01F1.12a protein.
Length = 366
Score = 304 bits (746), Expect = 5e-83
Identities = 153/231 (66%), Positives = 177/231 (76%)
Frame = +3
Query: 105 TPELQEELKXXAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 284
T ++EL A IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 285 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 464
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 465 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 644
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 645 PEVLPDGEHDLXRAXKVTEVVLAAVYKALNDHHVYLEGTLLKPNMVTXGQS 797
PEVL DGEHDL RA KVTE VLA VYKAL DHHVYLEGTLLKPNMVT GQS
Sbjct: 192 PEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQS 242
>U13070-14|AAM22057.1| 259|Caenorhabditis elegans Hypothetical
protein F01F1.12b protein.
Length = 259
Score = 304 bits (746), Expect = 5e-83
Identities = 153/231 (66%), Positives = 177/231 (76%)
Frame = +3
Query: 105 TPELQEELKXXAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 284
T ++EL A IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 285 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 464
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 465 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 644
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 645 PEVLPDGEHDLXRAXKVTEVVLAAVYKALNDHHVYLEGTLLKPNMVTXGQS 797
PEVL DGEHDL RA KVTE VLA VYKAL DHHVYLEGTLLKPNMVT GQS
Sbjct: 192 PEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQS 242
>D83739-1|BAA12092.1| 366|Caenorhabditis elegans aldolase Ce2
protein.
Length = 366
Score = 304 bits (746), Expect = 5e-83
Identities = 153/231 (66%), Positives = 177/231 (76%)
Frame = +3
Query: 105 TPELQEELKXXAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEENRRRYRQLLFSSDA 284
T ++EL A IV KGILAADESTGT+GKRL I +EN E NR++YRQLLF++
Sbjct: 13 TQAQKDELHQIALKIVQDGKGILAADESTGTIGKRLDAINLENNETNRQKYRQLLFTTPN 72
Query: 285 VLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 464
L+++ISGVIL+ ET +Q D G LL K+GI+PGIK+D GVVPL G+ E TTQGL
Sbjct: 73 -LNQHISGVILYEETFHQSTDKGEKFTDLLIKQGIVPGIKLDLGVVPLAGTIGEGTTQGL 131
Query: 465 DDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVE 644
D LA+R A +KK GC FAKWRCVL IG +TPS+ + ENANVLARYASICQ+ +VPIVE
Sbjct: 132 DKLAERAAAFKKGGCGFAKWRCVLNIGTHTPSHLGMLENANVLARYASICQANGLVPIVE 191
Query: 645 PEVLPDGEHDLXRAXKVTEVVLAAVYKALNDHHVYLEGTLLKPNMVTXGQS 797
PEVL DGEHDL RA KVTE VLA VYKAL DHHVYLEGTLLKPNMVT GQS
Sbjct: 192 PEVLCDGEHDLARAQKVTEQVLAFVYKALADHHVYLEGTLLKPNMVTPGQS 242
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 29.1 bits (62), Expect = 3.9
Identities = 35/151 (23%), Positives = 58/151 (38%)
Frame = +2
Query: 224 RGEHRGEPSSLSPTPIQL*RCALREHLRCDPVPRDPLPEG*RWNASGLPAGEEGHHPRHQ 403
+G R + ++ PT Q+ + + + + VPR P P P+ G HP Q
Sbjct: 140 QGASREQGNAHQPTAGQIPQSSNQPAQQTHNVPRMPQP----LQQVPHPSPVRGSHPAAQ 195
Query: 404 GRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPLVPSYPGKR 583
Q RI + + P P ++ V+ + Q+ +A R + P R
Sbjct: 196 QVQNAPQ--RIPQHVPMPQGVAPHQVIQQVRAPNIGASQMVQQAPSRGH---TGAAPASR 250
Query: 584 *CARPLRLHLSEPAHRADCRARSLT*WRARP 676
+P+ LH H+A + T R RP
Sbjct: 251 MAQQPVPLHQGVAPHQAAPQTIQQTPARGRP 281
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.1 bits (62), Expect = 3.9
Identities = 35/151 (23%), Positives = 58/151 (38%)
Frame = +2
Query: 224 RGEHRGEPSSLSPTPIQL*RCALREHLRCDPVPRDPLPEG*RWNASGLPAGEEGHHPRHQ 403
+G R + ++ PT Q+ + + + + VPR P P P+ G HP Q
Sbjct: 140 QGASREQGNAHQPTAGQIPQSSNQPAQQTHNVPRMPQP----LQQVPHPSPVRGSHPAAQ 195
Query: 404 GRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALRAEDRPQHPLVPSYPGKR 583
Q RI + + P P ++ V+ + Q+ +A R + P R
Sbjct: 196 QVQNAPQ--RIPQHVPMPQGVAPHQVIQQVRAPNIGASQMVQQAPSRGH---TGAAPASR 250
Query: 584 *CARPLRLHLSEPAHRADCRARSLT*WRARP 676
+P+ LH H+A + T R RP
Sbjct: 251 MAQQPVPLHQGVAPHQAAPQTIQQTPARGRP 281
>AF016439-1|AAB65898.3| 721|Caenorhabditis elegans Hypothetical
protein R02F11.2 protein.
Length = 721
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -2
Query: 546 GRSSARNATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 439
GR N G RPS +G AG RP GWC+++
Sbjct: 253 GRPRPGNGGGGGGVRPSNSGCDAGWRRFNRPSGGWCVKV 291
>Z46266-16|CAD44094.1| 1088|Caenorhabditis elegans Hypothetical
protein ZK899.8h protein.
Length = 1088
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/98 (24%), Positives = 32/98 (32%)
Frame = +2
Query: 353 NASGLPAGEEGHHPRHQGRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALR 532
NA G P ++P G RI + P P + V + L +
Sbjct: 106 NAYGFPIVPPANNPSDSSASG-----RIANLLSRPFRSNPLKRTKSVSKMEKSLAEANQH 160
Query: 533 AEDRPQHPLVPSYPGKR*CARPLRLHLSEPAHRADCRA 646
+ R PS P R HLS+PA RA
Sbjct: 161 SLHRVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRA 198
>Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/98 (24%), Positives = 32/98 (32%)
Frame = +2
Query: 353 NASGLPAGEEGHHPRHQGRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALR 532
NA G P ++P G RI + P P + V + L +
Sbjct: 155 NAYGFPIVPPANNPSDSSASG-----RIANLLSRPFRSNPLKRTKSVSKMEKSLAEANQH 209
Query: 533 AEDRPQHPLVPSYPGKR*CARPLRLHLSEPAHRADCRA 646
+ R PS P R HLS+PA RA
Sbjct: 210 SLHRVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRA 247
>Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/98 (24%), Positives = 32/98 (32%)
Frame = +2
Query: 353 NASGLPAGEEGHHPRHQGRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALR 532
NA G P ++P G RI + P P + V + L +
Sbjct: 277 NAYGFPIVPPANNPSDSSASG-----RIANLLSRPFRSNPLKRTKSVSKMEKSLAEANQH 331
Query: 533 AEDRPQHPLVPSYPGKR*CARPLRLHLSEPAHRADCRA 646
+ R PS P R HLS+PA RA
Sbjct: 332 SLHRVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRA 369
>Z46266-11|CAA86417.1| 1170|Caenorhabditis elegans Hypothetical
protein ZK899.8b protein.
Length = 1170
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/98 (24%), Positives = 32/98 (32%)
Frame = +2
Query: 353 NASGLPAGEEGHHPRHQGRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALR 532
NA G P ++P G RI + P P + V + L +
Sbjct: 188 NAYGFPIVPPANNPSDSSASG-----RIANLLSRPFRSNPLKRTKSVSKMEKSLAEANQH 242
Query: 533 AEDRPQHPLVPSYPGKR*CARPLRLHLSEPAHRADCRA 646
+ R PS P R HLS+PA RA
Sbjct: 243 SLHRVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRA 280
>Z37979-7|CAD44150.1| 1088|Caenorhabditis elegans Hypothetical
protein ZK899.8h protein.
Length = 1088
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/98 (24%), Positives = 32/98 (32%)
Frame = +2
Query: 353 NASGLPAGEEGHHPRHQGRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALR 532
NA G P ++P G RI + P P + V + L +
Sbjct: 106 NAYGFPIVPPANNPSDSSASG-----RIANLLSRPFRSNPLKRTKSVSKMEKSLAEANQH 160
Query: 533 AEDRPQHPLVPSYPGKR*CARPLRLHLSEPAHRADCRA 646
+ R PS P R HLS+PA RA
Sbjct: 161 SLHRVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRA 198
>Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/98 (24%), Positives = 32/98 (32%)
Frame = +2
Query: 353 NASGLPAGEEGHHPRHQGRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALR 532
NA G P ++P G RI + P P + V + L +
Sbjct: 155 NAYGFPIVPPANNPSDSSASG-----RIANLLSRPFRSNPLKRTKSVSKMEKSLAEANQH 209
Query: 533 AEDRPQHPLVPSYPGKR*CARPLRLHLSEPAHRADCRA 646
+ R PS P R HLS+PA RA
Sbjct: 210 SLHRVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRA 247
>Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/98 (24%), Positives = 32/98 (32%)
Frame = +2
Query: 353 NASGLPAGEEGHHPRHQGRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALR 532
NA G P ++P G RI + P P + V + L +
Sbjct: 277 NAYGFPIVPPANNPSDSSASG-----RIANLLSRPFRSNPLKRTKSVSKMEKSLAEANQH 331
Query: 533 AEDRPQHPLVPSYPGKR*CARPLRLHLSEPAHRADCRA 646
+ R PS P R HLS+PA RA
Sbjct: 332 SLHRVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRA 369
>Z37979-2|CAA86035.1| 1170|Caenorhabditis elegans Hypothetical
protein ZK899.8b protein.
Length = 1170
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/98 (24%), Positives = 32/98 (32%)
Frame = +2
Query: 353 NASGLPAGEEGHHPRHQGRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALR 532
NA G P ++P G RI + P P + V + L +
Sbjct: 188 NAYGFPIVPPANNPSDSSASG-----RIANLLSRPFRSNPLKRTKSVSKMEKSLAEANQH 242
Query: 533 AEDRPQHPLVPSYPGKR*CARPLRLHLSEPAHRADCRA 646
+ R PS P R HLS+PA RA
Sbjct: 243 SLHRVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRA 280
>AL132952-11|CAB61148.1| 136|Caenorhabditis elegans Hypothetical
protein Y51H4A.16 protein.
Length = 136
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +3
Query: 399 IKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKKDGCHFAKWRCVLKIGRNTPSYQAIQE 578
++V + V L + E T + L LAQ+ ++ +D W+C+ G +T + ++I+E
Sbjct: 22 VRVVERAVALHKNSKEKTNEKL--LAQKSGKWARDAESRNTWKCIRAPGAHTHTGESIKE 79
Query: 579 N 581
+
Sbjct: 80 S 80
>AC024775-8|AAK68458.1| 347|Caenorhabditis elegans Hypothetical
protein Y41D4A.8 protein.
Length = 347
Score = 28.3 bits (60), Expect = 6.8
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 348 DGTPLVSLLEKKGII--PGIKVDKGVVPLFGSEDECT 452
D +PLVS+L G+I P + + VPLF ED CT
Sbjct: 10 DPSPLVSVL---GLIKSPDLMIGSTEVPLFEEEDMCT 43
>AB011282-1|BAA24962.1| 210|Caenorhabditis elegans GAP-2-6 protein.
Length = 210
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/98 (24%), Positives = 32/98 (32%)
Frame = +2
Query: 353 NASGLPAGEEGHHPRHQGRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALR 532
NA G P ++P G RI + P P + V + L +
Sbjct: 28 NAYGFPIVPPANNPSDSSASG-----RIANLLSRPFRSNPLKRTKSVSKMEKSLAEANQH 82
Query: 533 AEDRPQHPLVPSYPGKR*CARPLRLHLSEPAHRADCRA 646
+ R PS P R HLS+PA RA
Sbjct: 83 SLHRVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRA 120
>AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein.
Length = 1120
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/98 (24%), Positives = 32/98 (32%)
Frame = +2
Query: 353 NASGLPAGEEGHHPRHQGRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALR 532
NA G P ++P G RI + P P + V + L +
Sbjct: 155 NAYGFPIVPPANNPSDSSASG-----RIANLLSRPFRSNPLKRTKSVSKMEKSLAEANQH 209
Query: 533 AEDRPQHPLVPSYPGKR*CARPLRLHLSEPAHRADCRA 646
+ R PS P R HLS+PA RA
Sbjct: 210 SLHRVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRA 247
>AB011279-1|BAA24959.1| 594|Caenorhabditis elegans GAP-2-3 protein.
Length = 594
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/98 (24%), Positives = 32/98 (32%)
Frame = +2
Query: 353 NASGLPAGEEGHHPRHQGRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALR 532
NA G P ++P G RI + P P + V + L +
Sbjct: 277 NAYGFPIVPPANNPSDSSASG-----RIANLLSRPFRSNPLKRTKSVSKMEKSLAEANQH 331
Query: 533 AEDRPQHPLVPSYPGKR*CARPLRLHLSEPAHRADCRA 646
+ R PS P R HLS+PA RA
Sbjct: 332 SLHRVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRA 369
>AB011278-1|BAA24958.1| 280|Caenorhabditis elegans GAP-2-2 protein.
Length = 280
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/98 (24%), Positives = 32/98 (32%)
Frame = +2
Query: 353 NASGLPAGEEGHHPRHQGRQGCRPAVRIRRRMHHPGSGRPRPALRPVQEGRLPLRQVALR 532
NA G P ++P G RI + P P + V + L +
Sbjct: 188 NAYGFPIVPPANNPSDSSASG-----RIANLLSRPFRSNPLKRTKSVSKMEKSLAEANQH 242
Query: 533 AEDRPQHPLVPSYPGKR*CARPLRLHLSEPAHRADCRA 646
+ R PS P R HLS+PA RA
Sbjct: 243 SLHRVDASNTPSRDSSLYAQPPARRHLSQPAREGSLRA 280
>Z82053-1|CAB04834.1| 233|Caenorhabditis elegans Hypothetical
protein T26E3.1 protein.
Length = 233
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 3/33 (9%)
Frame = -2
Query: 528 NATWRSGSRPSCTGRSAGR---GRPDPGWCIRL 439
N G RP+ G AG RP+ GWC+R+
Sbjct: 48 NGNGNGGGRPTNGGCDAGWRRFNRPNGGWCVRV 80
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 228 ENTEENRRRYRQLLFSSDA 284
E TEEN +RY QL+ SD+
Sbjct: 798 EQTEENEKRYEQLVSESDS 816
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 228 ENTEENRRRYRQLLFSSDA 284
E TEEN +RY QL+ SD+
Sbjct: 784 EQTEENEKRYEQLVSESDS 802
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3
Query: 228 ENTEENRRRYRQLLFSSDA 284
E TEEN +RY QL+ SD+
Sbjct: 784 EQTEENEKRYEQLVSESDS 802
>Z49908-11|CAA90104.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 541 SAATPPRTKLSRKTLMCSPATPPSVRASASC-RLSSPKSYLMASTTXTA 684
S+ P T S T +P+TPP +S+S SSP + ST TA
Sbjct: 45 SSNQPMSTVTSSTTSPITPSTPPRASSSSSMFAASSPSAAATYSTVTTA 93
>Z49070-5|CAA88872.2| 355|Caenorhabditis elegans Hypothetical
protein T09F3.1 protein.
Length = 355
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 541 SAATPPRTKLSRKTLMCSPATPPSVRASASC-RLSSPKSYLMASTTXTA 684
S+ P T S T +P+TPP +S+S SSP + ST TA
Sbjct: 45 SSNQPMSTVTSSTTSPITPSTPPRASSSSSMFAASSPSAAATYSTVTTA 93
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 27.9 bits (59), Expect = 8.9
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = -1
Query: 502 SFLYWAQRWARSSRPWVVHSSSDPNSGTTPLSTLMPGMMPFFSSRETRGVPSSA 341
S L +Q +S P VV SSS +S T ST+ P +S + PS++
Sbjct: 450 STLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTS 503
>AL117193-9|CAB60302.2| 737|Caenorhabditis elegans Hypothetical
protein Y105C5A.15 protein.
Length = 737
Score = 27.9 bits (59), Expect = 8.9
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +1
Query: 544 AATPPRTKLSRKTLMCSPATPPSVRASASCRLSSP 648
A P + L+R+TL C+PA P + A C SP
Sbjct: 682 AQFPTLSSLARRTL-CTPAIAPKTQFDARCASVSP 715
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,356,739
Number of Sequences: 27780
Number of extensions: 419437
Number of successful extensions: 1406
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1401
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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