Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_B09
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical p...   177   1e-44
Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical pr...   175   2e-44
CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical ...    31   0.98 
Z74031-2|CAA98454.2|  568|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z70310-6|CAE17904.1|  293|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical
           protein T05G5.10 protein.
          Length = 195

 Score =  177 bits (430), Expect = 1e-44
 Identities = 84/140 (60%), Positives = 107/140 (76%), Gaps = 2/140 (1%)
 Frame = +3

Query: 111 TFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPST 290
           TFP QCSALRKN  VM++GRPCKIVEMSTSKTGKHGHAKVH+V IDIF  KK EDICPST
Sbjct: 55  TFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPST 114

Query: 291 HNMDVPHVKREDYQLTDISDDGYLTLM-ADNGDLREDLKIPDGDLGTQLRTDFDSGK-EL 464
           HNMDVP VKR +Y L  I +DG+ +LM  ++ +L++DLK+P+GDLG  +R   +  +  +
Sbjct: 115 HNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPEGDLGNTIREALEKDEGSV 173

Query: 465 LCTVLKSCGEECVIAVKANT 524
           L  V+ +CGEE ++  K +T
Sbjct: 174 LVQVVAACGEEAILGYKIST 193


>Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical
           protein F54C9.1 protein.
          Length = 161

 Score =  175 bits (427), Expect = 2e-44
 Identities = 85/140 (60%), Positives = 106/140 (75%), Gaps = 2/140 (1%)
 Frame = +3

Query: 111 TFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPST 290
           TFP QCSALRKN  VM+KGRPCKIVEMSTSKTGKHGHAKVH+V IDIF  KK EDICPST
Sbjct: 21  TFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPST 80

Query: 291 HNMDVPHVKREDYQLTDISDDGYLTLM-ADNGDLREDLKIPDGDLGTQLRTDFDSGK-EL 464
           HNMDVP VKR +Y L  I DDGY +LM  ++ + ++DLK+PD +LG Q+R  ++  +  +
Sbjct: 81  HNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLPDTELGQQIRDAYEKDEGSV 139

Query: 465 LCTVLKSCGEECVIAVKANT 524
           L  V+ + GEE ++  K +T
Sbjct: 140 LVQVVSAIGEEAILGWKVST 159


>CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical
           protein K09E10.2 protein.
          Length = 695

 Score = 31.1 bits (67), Expect = 0.98
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
 Frame = +3

Query: 294 NMDVPHVKREDYQLTDI--SDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD-FDSGKEL 464
           N  +P +K++ Y L     ++ GY+  +   GDL+   KI D      LR D ++ G+  
Sbjct: 573 NKFIPFIKKKLYILDSFPRANSGYIARVP--GDLKNGKKIEDISKA-MLRPDGYERGRLR 629

Query: 465 LCTVLKSCGEEC 500
              ++K CG++C
Sbjct: 630 HAALVKECGDKC 641


>Z74031-2|CAA98454.2|  568|Caenorhabditis elegans Hypothetical
           protein F32D8.2 protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
 Frame = +3

Query: 249 IFNGKKYEDICPSTHNMDVPHVKREDYQLT------DISDDGYLTLMADN-GDLREDLK 404
           IF   + ED+   T +    H+ R + ++       D+S DGYLTL + N  DL  D++
Sbjct: 74  IFFPNEDEDVFGLTPDKSKQHIVRGECKINELNEKVDLSSDGYLTLRSKNTNDLPSDIR 132


>Z70310-6|CAE17904.1|  293|Caenorhabditis elegans Hypothetical
           protein R11A8.8 protein.
          Length = 293

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +3

Query: 354 GYLTLMADNGDLREDLKIPDGDLGTQLRTDFDSGKELLC 470
           GYL      GD ++++K+ +G    Q+ +D D  K   C
Sbjct: 251 GYLPQQPKKGDKKKNIKLKEGRTEHQIVSDIDPAKLRAC 289


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,339,460
Number of Sequences: 27780
Number of extensions: 387513
Number of successful extensions: 978
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)