Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_B07
(445 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9) 32 0.19
SB_58341| Best HMM Match : Ribosomal_60s (HMM E-Value=8.4) 30 0.99
SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 29 1.3
SB_5821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_4644| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_61| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0) 28 3.0
SB_53354| Best HMM Match : zf-CCHC (HMM E-Value=0.72) 28 4.0
SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 5.3
SB_25796| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.3
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 27 5.3
SB_39349| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 5.3
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 6.2
SB_19076| Best HMM Match : HECT (HMM E-Value=0) 27 7.0
SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_31013| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.0
SB_33208| Best HMM Match : Pepsin-I3 (HMM E-Value=4.7) 27 9.2
SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_12735| Best HMM Match : PT (HMM E-Value=0.36) 27 9.2
SB_7686| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9)
Length = 560
Score = 32.3 bits (70), Expect = 0.19
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +2
Query: 170 AENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 298
A+++ DADDED+++ +D+ +DD I D + + + D
Sbjct: 290 ADDYVNSDADDEDINIGDDDADDDDIYGDDDDDINSDDDAADD 332
Score = 31.9 bits (69), Expect = 0.24
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 170 AENWGTEDADDEDVSVWEDNWEDDVIQDDFN 262
A+++ DADDED++ +D +DD I D+N
Sbjct: 164 ADDYVNSDADDEDINSDDDAADDDNINGDYN 194
Score = 31.1 bits (67), Expect = 0.43
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +2
Query: 182 GTEDADDEDVSVWEDNWEDDVIQDD 256
G +DADDED+++ +D+ DD I D
Sbjct: 397 GDDDADDEDINIGDDDAADDDIYGD 421
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 182 GTEDADDEDVSVWEDNWEDDVIQDD 256
G DADDED++ +D +DD+ DD
Sbjct: 60 GDYDADDEDINGGDD--DDDIYGDD 82
>SB_58341| Best HMM Match : Ribosomal_60s (HMM E-Value=8.4)
Length = 153
Score = 29.9 bits (64), Expect = 0.99
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 188 EDADDEDVSVWEDNWEDDVIQDDFN 262
+D DD++V +D+ EDDV+ DD++
Sbjct: 70 DDNDDDEVDDDDDDVEDDVLDDDYD 94
>SB_13207| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 2735
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 182 GTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQL 283
GTED + ED ED+ DD D N++ ++Q+
Sbjct: 1675 GTEDVEKEDTKKKEDDKADDESNDKGNRRRKRQI 1708
>SB_5821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 562
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 182 GTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 307
GTEDA E +SV ++ + Q Q++ +Q ++LKD +S
Sbjct: 487 GTEDAKSETLSVQDEELQGLQQQHALLQKMLEQQQQLKDLQS 528
>SB_4644| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 63
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = +2
Query: 173 ENWGTEDADDEDVSVWEDN--WEDDVIQDD 256
E G ED DD+D S ED+ + DDVI DD
Sbjct: 16 EYHGDEDDDDDDKSSKEDDEIYCDDVIDDD 45
>SB_61| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 188 EDADDEDVSVWEDNWEDDVIQDD 256
+D DD+D V +D+ +DDV+ DD
Sbjct: 13 DDDDDDDDDVDDDDDDDDVVDDD 35
>SB_36312| Best HMM Match : Ion_trans (HMM E-Value=0)
Length = 1283
Score = 28.3 bits (60), Expect = 3.0
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2
Query: 173 ENWGTEDADDEDVSVWEDNWEDDVIQDD 256
+ W ED DD+ W+D+ ED+ +D+
Sbjct: 1113 DKWEGEDEDDDIKESWDDDDEDEKKEDE 1140
>SB_53354| Best HMM Match : zf-CCHC (HMM E-Value=0.72)
Length = 298
Score = 27.9 bits (59), Expect = 4.0
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 197 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKD 298
D+ED +V ++ Q D ++Q++Q+L+KLKD
Sbjct: 6 DEEDGAVAPSATKNSQTQCDPDEQIQQRLQKLKD 39
>SB_30986| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 2682
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -1
Query: 232 PVVFPNRYIFIISVFCTPIFRRKFFELVILF*QTKVYFLFVSHY 101
P++ +R I CT + R FF V VY LF+ +Y
Sbjct: 281 PIITESRLISSARALCTLYYLRFFFSHVNCCLNPLVYLLFIENY 324
>SB_25796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 188 EDADDEDVSVWEDNWEDDVIQDD 256
+D DD+DV + +D+ +DDV DD
Sbjct: 76 DDVDDDDVDIGDDD-DDDVNDDD 97
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/40 (25%), Positives = 27/40 (67%)
Frame = +2
Query: 188 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 307
E+ D+E+ + E+++++D+ DD L ++ E++ ++K+
Sbjct: 1836 EEEDEEEDEIEEEDYDEDIGDDD--DDLEEEAEEVAERKA 1873
>SB_39349| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 1125
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = -1
Query: 232 PVVFPNRYIFIISVFCTPIFRRKFFELVILF*QTKVYFLFVSHY 101
P++ +R I CT + R FF V VY LF+ +Y
Sbjct: 1024 PIITESRLISSARALCTLYYLRFFFSHVNCCLNPLVYLLFIENY 1067
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 24.2 bits (50), Expect(2) = 6.2
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 221 EDNWEDDVIQDDFNQQLRQQLEKLKDQK 304
EDN +DDV DD + R +K K+ K
Sbjct: 7437 EDNDDDDVSDDDVSGDNRSGGKKNKESK 7464
Score = 21.0 bits (42), Expect(2) = 6.2
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2
Query: 185 TEDADDEDVS 214
TED DD+DVS
Sbjct: 7436 TEDNDDDDVS 7445
>SB_19076| Best HMM Match : HECT (HMM E-Value=0)
Length = 2018
Score = 27.1 bits (57), Expect = 7.0
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 182 GTEDADDEDVSVWEDNWEDD 241
G+ED +DED S +D ++DD
Sbjct: 1312 GSEDIEDEDCSRRDDEYDDD 1331
>SB_1298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1668
Score = 27.1 bits (57), Expect = 7.0
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = +2
Query: 188 EDADDEDVSVWEDNWEDDVIQDDFNQQLRQQLEKLKDQKS 307
ED +++ W+ ++D I+D FN++ + + K QK+
Sbjct: 1147 EDKFNKEHKAWKPVYKDTYIEDKFNKEHKAWMHKSDYQKN 1186
>SB_31013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 197 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 286
DDE +V D+ DDVI DD N + ++ E
Sbjct: 31 DDESKNVMNDH--DDVIDDDVNDETQEDKE 58
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 197 DDEDVSVWEDNWEDDVIQDDFNQQLRQQLE 286
DDE V D+ DDVI DD N + +++ E
Sbjct: 1258 DDESKDVMNDH--DDVIDDDVNDETQEEEE 1285
>SB_33208| Best HMM Match : Pepsin-I3 (HMM E-Value=4.7)
Length = 256
Score = 26.6 bits (56), Expect = 9.2
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +2
Query: 173 ENWGTEDADDEDVSVWEDNWEDDVIQDDFNQQLRQQ 280
+N G +D+D + + N +DD +DD N + +Q
Sbjct: 211 DNGGDGGGNDDDDDIGDGNDDDDEDKDDNNSPVNEQ 246
>SB_46386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 849
Score = 26.6 bits (56), Expect = 9.2
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +2
Query: 173 ENWGTEDAD-DEDVSVWEDNWEDDVIQDDF 259
E +G +D+D D+DV+ ++N +DD + DD+
Sbjct: 397 EGYGDDDSDIDDDVN--DNNDDDDYMMDDY 424
>SB_12735| Best HMM Match : PT (HMM E-Value=0.36)
Length = 1148
Score = 26.6 bits (56), Expect = 9.2
Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
Frame = +2
Query: 71 IFPYFNNHHSIMADKQKVDLGXXXXXXX--XXXXPAENWGTEDAD-DEDVSVWEDNWEDD 241
I+ + + + + D Q +D P E E+ D +EDV +W+DN E
Sbjct: 879 IYQHMRDEYGLTPDAQTLDSATADQAKEQDSATFPDEKSDGENVDIEEDVPLWKDNEEKQ 938
Query: 242 VIQ 250
Q
Sbjct: 939 EAQ 941
>SB_7686| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 82
Score = 26.6 bits (56), Expect = 9.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 182 GTEDADDEDVSVWEDNWEDDVIQDD 256
G +D DD+D V +D+ +D+ + DD
Sbjct: 46 GDDDDDDDDEDVDDDDDDDEDVDDD 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,163,931
Number of Sequences: 59808
Number of extensions: 172039
Number of successful extensions: 1769
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1614
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 871599479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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