Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_B06
(708 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 31 0.007
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 29 0.028
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 29 0.028
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 29 0.028
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 29 0.028
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 29 0.028
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 29 0.028
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 29 0.028
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 28 0.065
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 22 5.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 5.6
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 22 5.6
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 22 5.6
DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory pro... 21 9.8
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 21 9.8
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 21 9.8
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.007
Identities = 25/72 (34%), Positives = 33/72 (45%)
Frame = -2
Query: 332 PSDKSEVGARSFLVPRVMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNAR 153
P D S GA PR S PS ++ T+S T PL++ST G A S T+
Sbjct: 113 PQDLSTNGAP----PRSTPPLSTPSNSNATKSSGLTSPLSVSTSP---PGKPATSTTSQN 165
Query: 152 TSRPFLRAASTA 117
S P +ST+
Sbjct: 166 LSSPASSTSSTS 177
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 29.5 bits (63), Expect = 0.028
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = -2
Query: 332 PSDKSEVGARSFLVPRVMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNAR 153
P D S GA PR S PS ++ T+S T PL++ST G A S +
Sbjct: 113 PQDLSTNGAP----PRSTPPLSTPSNSNATKSSGLTSPLSVSTSP---PGKPATSTASQN 165
Query: 152 TSRPFLRAASTA 117
S P +ST+
Sbjct: 166 LSSPASSTSSTS 177
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 29.5 bits (63), Expect = 0.028
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = -2
Query: 332 PSDKSEVGARSFLVPRVMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNAR 153
P D S GA PR S PS ++ T+S T PL++ST G A S +
Sbjct: 113 PQDLSTNGAP----PRSTPPLSTPSNSNATKSSGLTSPLSVSTSP---PGKPATSTASQN 165
Query: 152 TSRPFLRAASTA 117
S P +ST+
Sbjct: 166 LSSPASSTSSTS 177
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 29.5 bits (63), Expect = 0.028
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = -2
Query: 332 PSDKSEVGARSFLVPRVMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNAR 153
P D S GA PR S PS ++ T+S T PL++ST G A S +
Sbjct: 113 PQDLSTNGAP----PRSTPPLSTPSNSNATKSSGLTSPLSVSTSP---PGKPATSTASQN 165
Query: 152 TSRPFLRAASTA 117
S P +ST+
Sbjct: 166 LSSPASSTSSTS 177
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 29.5 bits (63), Expect = 0.028
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = -2
Query: 332 PSDKSEVGARSFLVPRVMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNAR 153
P D S GA PR S PS ++ T+S T PL++ST G A S +
Sbjct: 113 PQDLSTNGAP----PRSTPPLSTPSNSNATKSSGLTSPLSVSTSP---PGKPATSTASQN 165
Query: 152 TSRPFLRAASTA 117
S P +ST+
Sbjct: 166 LSSPASSTSSTS 177
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 29.5 bits (63), Expect = 0.028
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = -2
Query: 332 PSDKSEVGARSFLVPRVMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNAR 153
P D S GA PR S PS ++ T+S T PL++ST G A S +
Sbjct: 69 PQDLSTNGAP----PRSTPPLSTPSNSNATKSSGLTSPLSVSTSP---PGKPATSTASQN 121
Query: 152 TSRPFLRAASTA 117
S P +ST+
Sbjct: 122 LSSPASSTSSTS 133
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 29.5 bits (63), Expect = 0.028
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = -2
Query: 332 PSDKSEVGARSFLVPRVMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNAR 153
P D S GA PR S PS ++ T+S T PL++ST G A S +
Sbjct: 113 PQDLSTNGAP----PRSTPPLSTPSNSNATKSSGLTSPLSVSTSP---PGKPATSTASQN 165
Query: 152 TSRPFLRAASTA 117
S P +ST+
Sbjct: 166 LSSPASSTSSTS 177
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 29.5 bits (63), Expect = 0.028
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = -2
Query: 332 PSDKSEVGARSFLVPRVMTTASVPSTASCTESGSRTFPLTISTLSLRCSGSFAGSRTNAR 153
P D S GA PR S PS ++ T+S T PL++ST G A S +
Sbjct: 113 PQDLSTNGAP----PRSTPPLSTPSNSNATKSSGLTSPLSVSTSP---PGKPATSTASQN 165
Query: 152 TSRPFLRAASTA 117
S P +ST+
Sbjct: 166 LSSPASSTSSTS 177
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 28.3 bits (60), Expect = 0.065
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = -2
Query: 332 PSDKSEVGARSFLVPRVMTTASVPSTASCTESGSRTFPLTIST 204
P D S GA PR S PS ++ T+S T PL++ST
Sbjct: 113 PQDLSTNGAP----PRSTPPLSTPSNSNATKSSGLTSPLSVST 151
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +2
Query: 620 WTRFPNPNTTRQPLASAMCPKNEGTYXRY 706
WT N P ++ C KN+ T Y
Sbjct: 11 WTNSFYQNYKTNPFLASDCDKNQNTEQNY 39
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 5.6
Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -2
Query: 236 GSRTFPLTISTLSLRC-SGSFAGSRTNAR-----TSRPFLRAASTAFKPITPVEPKITT 78
G+ + + + S RC GSF R+ R P + +P+TP P++TT
Sbjct: 961 GAVAWTIDLDDFSNRCCGGSFPLLRSLNRGLGLIPDNPSREDCTKPPEPVTPAPPQVTT 1019
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +2
Query: 620 WTRFPNPNTTRQPLASAMCPKNEGTYXRY 706
WT N P ++ C KN+ T Y
Sbjct: 11 WTNSFYQNYKTNPFLASDCDKNQNTEQNY 39
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 21.8 bits (44), Expect = 5.6
Identities = 9/29 (31%), Positives = 12/29 (41%)
Frame = +2
Query: 620 WTRFPNPNTTRQPLASAMCPKNEGTYXRY 706
WT N P ++ C KN+ T Y
Sbjct: 11 WTNSFYQNYKTNPFLASDCDKNQNTEHNY 39
>DQ855492-1|ABH88179.1| 251|Tribolium castaneum chemosensory
protein 6 protein.
Length = 251
Score = 21.0 bits (42), Expect = 9.8
Identities = 6/18 (33%), Positives = 10/18 (55%)
Frame = -3
Query: 682 LWAHCRCQWLPCSIWVRK 629
+W R W P +++RK
Sbjct: 97 IWEQLRAVWDPDDVFIRK 114
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 21.0 bits (42), Expect = 9.8
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 262 GTDAVVITLGTRNDLAPTSDLSEGTKN 342
G V++TL T + AP D T+N
Sbjct: 5 GLFCVLVTLATARNKAPLLDDGTRTRN 31
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.0 bits (42), Expect = 9.8
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +3
Query: 579 GQDHC*VRPRHIPSGRAFRTQIL 647
G+D C VR RHI Q++
Sbjct: 347 GEDQCDVRFRHITEITILTVQLI 369
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,436
Number of Sequences: 336
Number of extensions: 3303
Number of successful extensions: 21
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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