Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_A20
         (603 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY442331-1|AAS01604.1|  469|Homo sapiens zinc finger protein ZNF...    30   7.2  
AY442330-1|AAS01603.1|  522|Homo sapiens zinc finger protein ZNF...    30   7.2  

>AY442331-1|AAS01604.1|  469|Homo sapiens zinc finger protein
           ZNF468.2 protein.
          Length = 469

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 23/80 (28%), Positives = 32/80 (40%)
 Frame = +2

Query: 158 PSTHXXXXXXXXXXXXXLIQQRYKNELLFSFKCFLDC*HHFYGFNSKSVLKKS*IIQINL 337
           P TH             L+ Q++  E+    K F +C   F  FN  S+LKK  II +  
Sbjct: 131 PKTHISNKYGNNSLHSSLLTQKW--EVHMREKSF-ECIQSFKSFNCSSLLKKHQIIHLEE 187

Query: 338 K*VVQCFCARE*SYKAYKHC 397
           K      C +  + K Y  C
Sbjct: 188 KQCKCDVCGKVFNQKRYLAC 207


>AY442330-1|AAS01603.1|  522|Homo sapiens zinc finger protein
           ZNF468.1 protein.
          Length = 522

 Score = 29.9 bits (64), Expect = 7.2
 Identities = 23/80 (28%), Positives = 32/80 (40%)
 Frame = +2

Query: 158 PSTHXXXXXXXXXXXXXLIQQRYKNELLFSFKCFLDC*HHFYGFNSKSVLKKS*IIQINL 337
           P TH             L+ Q++  E+    K F +C   F  FN  S+LKK  II +  
Sbjct: 184 PKTHISNKYGNNSLHSSLLTQKW--EVHMREKSF-ECIQSFKSFNCSSLLKKHQIIHLEE 240

Query: 338 K*VVQCFCARE*SYKAYKHC 397
           K      C +  + K Y  C
Sbjct: 241 KQCKCDVCGKVFNQKRYLAC 260


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,195,819
Number of Sequences: 237096
Number of extensions: 1480375
Number of successful extensions: 6181
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6181
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)