Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_A18
         (514 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113429-1|AAM29434.1|  112|Drosophila melanogaster RE23864p pro...   149   3e-36
AE014134-1484|AAF52660.1|  112|Drosophila melanogaster CG13393-P...   149   3e-36
BT021292-1|AAX33440.1|  416|Drosophila melanogaster RE27549p pro...    28   8.5  
AE013599-3395|AAF46845.1|  416|Drosophila melanogaster CG5821-PA...    28   8.5  

>AY113429-1|AAM29434.1|  112|Drosophila melanogaster RE23864p
           protein.
          Length = 112

 Score =  149 bits (360), Expect = 3e-36
 Identities = 68/104 (65%), Positives = 78/104 (75%)
 Frame = +1

Query: 70  MSSLTAVIPKLYQAXXXXXXXXXXIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFI 249
           M  L++VI K Y            ++D YL YI LT +IQF YCCLVGTFPFNSFLSGFI
Sbjct: 1   MVELSSVISKFYNDYVQNTPKKLKLVDIYLGYILLTGIIQFVYCCLVGTFPFNSFLSGFI 60

Query: 250 STVSCFVLGVCLRLQVNPENKNEFQGLSAERGFADFIFAHLVLH 381
           STVSCFVL VCLRLQ NP+NK+ F G+S ERGFADFIFAH++LH
Sbjct: 61  STVSCFVLAVCLRLQANPQNKSVFAGISPERGFADFIFAHVILH 104


>AE014134-1484|AAF52660.1|  112|Drosophila melanogaster CG13393-PA
           protein.
          Length = 112

 Score =  149 bits (360), Expect = 3e-36
 Identities = 68/104 (65%), Positives = 78/104 (75%)
 Frame = +1

Query: 70  MSSLTAVIPKLYQAXXXXXXXXXXIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFI 249
           M  L++VI K Y            ++D YL YI LT +IQF YCCLVGTFPFNSFLSGFI
Sbjct: 1   MVELSSVISKFYNDYVQNTPKKLKLVDIYLGYILLTGIIQFVYCCLVGTFPFNSFLSGFI 60

Query: 250 STVSCFVLGVCLRLQVNPENKNEFQGLSAERGFADFIFAHLVLH 381
           STVSCFVL VCLRLQ NP+NK+ F G+S ERGFADFIFAH++LH
Sbjct: 61  STVSCFVLAVCLRLQANPQNKSVFAGISPERGFADFIFAHVILH 104


>BT021292-1|AAX33440.1|  416|Drosophila melanogaster RE27549p
           protein.
          Length = 416

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 365 ANMKSAKPRSALSPWNSFLFSGLTCSRRHTPRTKQLTVDIKPLKKELNGKVPTRQQ 198
           A+ + A+P  A+  +   L +  +    H P   +L +D    + +LNG++PTR Q
Sbjct: 62  ADGEKAQPAPAVQKYMQELMTERSRMENHFPLAVKL-IDEALERVQLNGRIPTRDQ 116


>AE013599-3395|AAF46845.1|  416|Drosophila melanogaster CG5821-PA
           protein.
          Length = 416

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -3

Query: 365 ANMKSAKPRSALSPWNSFLFSGLTCSRRHTPRTKQLTVDIKPLKKELNGKVPTRQQ 198
           A+ + A+P  A+  +   L +  +    H P   +L +D    + +LNG++PTR Q
Sbjct: 62  ADGEKAQPAPAVQKYMQELMTERSRMENHFPLAVKL-IDEALERVQLNGRIPTRDQ 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,801,120
Number of Sequences: 53049
Number of extensions: 338831
Number of successful extensions: 754
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1867000320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)