Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_A13
         (477 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.32 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   2.9  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        21   6.8  
AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin prot...    21   6.8  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.4 bits (53), Expect = 0.32
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 17  PSQRLNHHQQSACSAQIARRPQ 82
           P Q+L+HHQ +   AQ   +PQ
Sbjct: 810 PHQQLHHHQSTHPQAQAQAQPQ 831


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 210 RVYRSLCPNEWVDKWDNQRAEGTFAGRI 293
           R++     NE VDK  N+RA G    +I
Sbjct: 376 RIFSPHEENESVDKHPNRRARGQLRTKI 403


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 178 AKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPSPVG 291
           A  TS AT S E +  +A ++ +         +PSP G
Sbjct: 29  ACTTSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTG 66


>AB073997-1|BAC76401.1|  124|Apis mellifera preprotachykinin
           protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -1

Query: 255 PTCRPTHWGRETCTLS*NSSMARIFRRELXGNGG 154
           PT      G+E  + S NS    IF+R L G  G
Sbjct: 31  PTGHQEMQGKEKNSASLNSENFGIFKRALMGFQG 64


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,874
Number of Sequences: 438
Number of extensions: 2078
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)