Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_A08
         (801 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040594-1|AAH40594.1|  586|Homo sapiens zinc finger protein 92 ...    38   0.056
BC036439-1|AAH36439.1|  517|Homo sapiens zinc finger protein 92 ...    38   0.056
AK091618-1|BAC03708.1|  586|Homo sapiens protein ( Homo sapiens ...    38   0.056

>BC040594-1|AAH40594.1|  586|Homo sapiens zinc finger protein 92
           protein.
          Length = 586

 Score = 37.5 bits (83), Expect = 0.056
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
 Frame = +1

Query: 487 LFRHLLQYNNIHSFQYSYVKDDQFGMSNFNWKVGNSNYQILRTGCFPYIKYHCSRKKAED 666
           +   L Q+  IH+ +YSY K ++ G + FNW    + ++I+ TG  PY    C +     
Sbjct: 184 MLSQLTQHKKIHTREYSY-KCEECGKA-FNWSSTLTKHKIIHTGEKPYKCEECGKAFNRS 241

Query: 667 LNMSDKFMRIIKVANLGIPCLLYGLA---ATQLIRHEELVHTSXGP 795
            N++    +II        C   G A   ++ L +H+  +HT   P
Sbjct: 242 SNLTKH--KIIHTGEKPYKCEECGKAFNRSSTLTKHKR-IHTEEKP 284


>BC036439-1|AAH36439.1|  517|Homo sapiens zinc finger protein 92
           protein.
          Length = 517

 Score = 37.5 bits (83), Expect = 0.056
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
 Frame = +1

Query: 487 LFRHLLQYNNIHSFQYSYVKDDQFGMSNFNWKVGNSNYQILRTGCFPYIKYHCSRKKAED 666
           +   L Q+  IH+ +YSY K ++ G + FNW    + ++I+ TG  PY    C +     
Sbjct: 115 MLSQLTQHKKIHTREYSY-KCEECGKA-FNWSSTLTKHKIIHTGEKPYKCEECGKAFNRS 172

Query: 667 LNMSDKFMRIIKVANLGIPCLLYGLA---ATQLIRHEELVHTSXGP 795
            N++    +II        C   G A   ++ L +H+  +HT   P
Sbjct: 173 SNLTKH--KIIHTGEKPYKCEECGKAFNRSSTLTKHKR-IHTEEKP 215


>AK091618-1|BAC03708.1|  586|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34299 fis, clone FEBRA2006372, moderately
           similar to ZINC FINGER PROTEIN 85. ).
          Length = 586

 Score = 37.5 bits (83), Expect = 0.056
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
 Frame = +1

Query: 487 LFRHLLQYNNIHSFQYSYVKDDQFGMSNFNWKVGNSNYQILRTGCFPYIKYHCSRKKAED 666
           +   L Q+  IH+ +YSY K ++ G + FNW    + ++I+ TG  PY    C +     
Sbjct: 184 MLSQLTQHKKIHTREYSY-KCEECGKA-FNWSSTLTKHKIIHTGEKPYKCEECGKAFNRS 241

Query: 667 LNMSDKFMRIIKVANLGIPCLLYGLA---ATQLIRHEELVHTSXGP 795
            N++    +II        C   G A   ++ L +H+  +HT   P
Sbjct: 242 SNLTKH--KIIHTGEKPYKCEECGKAFNRSSTLTKHKR-IHTEEKP 284


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,267,840
Number of Sequences: 237096
Number of extensions: 2124657
Number of successful extensions: 2593
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2593
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)