Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P12_F_A07
         (761 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical pr...    46   2e-05
U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical pr...    44   9e-05
AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical...    34   0.13 
AL032626-7|CAA21544.1|   79|Caenorhabditis elegans Hypothetical ...    30   1.6  
AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical ...    30   2.1  
Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical pr...    29   4.8  

>Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical
           protein F36G3.3 protein.
          Length = 141

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +3

Query: 168 QMGPKSVRYTCPSCRASIKTRVEYVSATKTHXXXXXXXXXXXXXXXXIPYCGKSCRNATH 347
           ++ P + +  CP CR  I TR + V    T                 +P+C +SC++  H
Sbjct: 67  RLEPHATKLQCPYCRMDIVTRTKSVYGLLTWIFFAALFLFGCWCCCFLPFCLRSCKDIIH 126

Query: 348 YCPNCSA 368
            CPNC A
Sbjct: 127 TCPNCRA 133


>U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical
           protein F16F9.1 protein.
          Length = 157

 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 24/82 (29%), Positives = 34/82 (41%)
 Frame = +3

Query: 123 GPTVPTQQFITVQAPQMGPKSVRYTCPSCRASIKTRVEYVSATKTHXXXXXXXXXXXXXX 302
           G   PT   +T   P     S   TC SC   + T  ++V  + T               
Sbjct: 68  GQPNPTVVIVTTPKPAPSFASYETTCYSCGKYVHTLPKFVIGSLT-WIVFILVLICFFPL 126

Query: 303 XXIPYCGKSCRNATHYCPNCSA 368
             +P+C  SC++A HYCP C+A
Sbjct: 127 AFVPFCLDSCKDAHHYCPRCNA 148


>AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical
           protein Y87G2A.19 protein.
          Length = 110

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +3

Query: 198 CPSCRASIKTRVEYVSATKTHXXXXXXXXXXXXXXXX----IPYCGKSCRNATHYCPNCS 365
           CP C+   +T + +V+   T+                    +P+C ++ ++A HYCP+C 
Sbjct: 38  CPRCKVHGETELRFVNGFFTYVSFFIILIFGFAILPLFFLWVPFCVETFKDAEHYCPSCR 97

Query: 366 A 368
           A
Sbjct: 98  A 98


>AL032626-7|CAA21544.1|   79|Caenorhabditis elegans Hypothetical
           protein Y37D8A.8 protein.
          Length = 79

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/55 (29%), Positives = 21/55 (38%)
 Frame = +3

Query: 198 CPSCRASIKTRVEYVSATKTHXXXXXXXXXXXXXXXXIPYCGKSCRNATHYCPNC 362
           CP CR ++ T VEY                       +  C    R+A H+CPNC
Sbjct: 17  CPRCRCTVVTVVEYEMGCFAWLIIILIIFVAFFLIYIL--CCIDIRDAIHHCPNC 69


>AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical
           protein Y37D8A.6 protein.
          Length = 132

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 22/84 (26%), Positives = 31/84 (36%), Gaps = 4/84 (4%)
 Frame = +3

Query: 123 GPTVPTQQ--FITVQAPQMGPKSVRYT--CPSCRASIKTRVEYVSATKTHXXXXXXXXXX 290
           GP    QQ   I +   +M P    YT  CP C  ++ TRVE      +           
Sbjct: 42  GPVYVVQQPQEIIIVGTKMAPSFEPYTEFCPRCNTNVCTRVERTMGFCSWTMLFLGLFVF 101

Query: 291 XXXXXXIPYCGKSCRNATHYCPNC 362
                   +C    +++ H CPNC
Sbjct: 102 FPLLCC--FCLDGFKDSRHSCPNC 123


>Z69664-4|CAA93517.1|  483|Caenorhabditis elegans Hypothetical
           protein K04D7.3 protein.
          Length = 483

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -1

Query: 392 LTDVAPDIRAAVRTVVCGVSAAFAAIRNA 306
           LT +AP    AV+T++CG SA   AI+ A
Sbjct: 131 LTSIAPKGLKAVQTMLCGTSANENAIKTA 159


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,224,747
Number of Sequences: 27780
Number of extensions: 286280
Number of successful extensions: 607
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 605
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)