Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P12_F_A03
(564 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme... 67 9e-12
Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical pr... 50 9e-07
Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical pr... 40 0.001
U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical pr... 34 0.061
Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical pr... 33 0.19
U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a... 33 0.19
Z70718-4|CAA94672.1| 225|Caenorhabditis elegans Hypothetical pr... 27 9.3
AC006723-3|AAF59427.1| 881|Caenorhabditis elegans Hypothetical ... 27 9.3
>AF003140-9|AAB54171.1| 86|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 1 protein.
Length = 86
Score = 66.9 bits (156), Expect = 9e-12
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = +2
Query: 2 LLXLSAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIA 181
LL L A FKQ TVG + + PG+ LKGKAK+ AW + G +K+DAQKAY+ +VE LIA
Sbjct: 24 LLKLYALFKQGTVGD-NTTDKPGMFDLKGKAKWSAWDEKKGLAKDDAQKAYVALVEELIA 82
Query: 182 SIG 190
G
Sbjct: 83 KYG 85
>Z46794-8|CAA86779.1| 385|Caenorhabditis elegans Hypothetical
protein R06F6.9 protein.
Length = 385
Score = 50.4 bits (115), Expect = 9e-07
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = +2
Query: 5 LXLSAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIA 181
L L FKQAT G PG++ G+AK+DAW+ L G ++++A+ Y ++V GLI+
Sbjct: 49 LQLYGLFKQATAGDVQ-GKRPGMMDFVGRAKYDAWNTLKGQTQDEARANYAKLVGGLIS 106
>Z68004-6|CAA91987.2| 116|Caenorhabditis elegans Hypothetical
protein F47B10.7 protein.
Length = 116
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/55 (30%), Positives = 36/55 (65%)
Frame = +2
Query: 23 FKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIASI 187
FKQA++G + + PG+ ++ + K+D+W +L G S+++A++ YI+ + + I
Sbjct: 37 FKQASIGDVN-TDRPGIFSIIERKKWDSWKELEGVSQDEAKERYIKALNDMFDKI 90
>Z92826-2|CAB07319.1| 266|Caenorhabditis elegans Hypothetical
protein C18D11.2 protein.
Length = 266
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/68 (35%), Positives = 38/68 (55%)
Frame = +2
Query: 5 LXLSAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIAS 184
L A FKQAT G D P ++G K++AW+KL + ++A++AY++ + I
Sbjct: 28 LNFYALFKQATHGKCD-LPKPSFYDIQGVYKWNAWNKLDNMTMDEAKQAYVDSIVQKIRE 86
Query: 185 IGLKE*KT 208
+ KE KT
Sbjct: 87 V-QKEYKT 93
>U27312-8|AAZ32809.1| 219|Caenorhabditis elegans Hypothetical
protein F26A1.15 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.061
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 80 LKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGL 175
+ G K+ AW+K G +KE+A + Y+E V+ L
Sbjct: 157 INGNEKWHAWNKCRGLTKEEASEQYVEAVQKL 188
>Z81120-7|CAB03343.2| 274|Caenorhabditis elegans Hypothetical
protein T12D8.3 protein.
Length = 274
Score = 32.7 bits (71), Expect = 0.19
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +2
Query: 23 FKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIEIVEGLIAS 184
+KQA G AD P + KF++W + S+ A +AY E++ L S
Sbjct: 58 YKQAVEGPADSKKGPYWFETVARKKFNSWLANSQMSRSRAMEAYCELMAQLDTS 111
>U00063-1|AAK18960.1| 146|Caenorhabditis elegans Acyl-coenzyme a
binding proteinprotein 4 protein.
Length = 146
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +2
Query: 5 LXLSAHFKQATVGAADPANSPGLLALKGKAKFDAWHKLAGTSKEDAQKAYIE 160
L + + +KQAT G D P ++ + K++AW++L + +A+ Y+E
Sbjct: 33 LQMYSLYKQATSGKCDTIQ-PYFFQIEQRMKWNAWNQLGNMDEAEAKAQYVE 83
>Z70718-4|CAA94672.1| 225|Caenorhabditis elegans Hypothetical
protein C04G2.5 protein.
Length = 225
Score = 27.1 bits (57), Expect = 9.3
Identities = 14/66 (21%), Positives = 26/66 (39%)
Frame = +2
Query: 188 GLKE*KT*FSMMQEHDNFHYRVYYINTRDFSHHHRASDFFDAIFILHFCLKCFFFKNTNS 367
GLK K + + + Y + + + +A + F F+ FC + KN
Sbjct: 82 GLKIHKMVHNFIPSRKQGYLGYYNFDVKSYEESEKARNLFPTDFVDAFCCQHLLGKNEQE 141
Query: 368 Y*FHKI 385
+ FH +
Sbjct: 142 FVFHAV 147
>AC006723-3|AAF59427.1| 881|Caenorhabditis elegans Hypothetical
protein Y19D10B.4 protein.
Length = 881
Score = 27.1 bits (57), Expect = 9.3
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Frame = -1
Query: 129 EVPASLCQASNLALPFKARR---PGLLAGSAAPTVACLKWA--DKXR 4
E+ A L NL P + PG + G + C +WA DK R
Sbjct: 20 EISAQLANCQNLGTPINSTDCLCPGFVDGRLCENIKCQRWAVPDKNR 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,489,941
Number of Sequences: 27780
Number of extensions: 208612
Number of successful extensions: 528
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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