Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_P24
(344 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 77 2e-14
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 77 2e-14
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 77 2e-14
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 77 2e-14
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 77 2e-14
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 76 3e-14
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 72 6e-13
X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane h... 33 0.18
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 33 0.18
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 33 0.18
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 33 0.18
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 33 0.18
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = -1
Query: 242 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 90
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = -1
Query: 242 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 90
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = -1
Query: 242 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 90
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = -1
Query: 242 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 90
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 76.6 bits (180), Expect = 2e-14
Identities = 34/51 (66%), Positives = 43/51 (84%)
Frame = -1
Query: 242 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 90
M S +ELAC+YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1 MASVSELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 76.2 bits (179), Expect = 3e-14
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = -1
Query: 242 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 90
M S +ELAC+YSAL+L DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1 MASVSELACIYSALVLHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 71.7 bits (168), Expect = 6e-13
Identities = 33/51 (64%), Positives = 42/51 (82%)
Frame = -1
Query: 242 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 90
M S +ELA +YSALIL DD+V VT +KI+ ++KAA V+VEP+WPGLFAK L
Sbjct: 1 MASVSELARIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKAL 51
>X62515-1|CAA44373.1| 4393|Homo sapiens Human basement membrane
heparan sulfate proteoglycan core protein protein.
Length = 4393
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = -1
Query: 218 CVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDLGRHQCAVT*SPTSALEW 39
C S + +D A + S L A V + P + L +C+ T SPT LEW
Sbjct: 1842 CTGSNMFAMDQGTATLHVQASGTLSAPVVSIHPPQLTVQPGQLAEFRCSATGSPTPTLEW 1901
Query: 38 VLLRPTGGAPA 6
P G PA
Sbjct: 1902 T-GGPGGQLPA 1911
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = -1
Query: 218 CVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDLGRHQCAVT*SPTSALEW 39
C S + +D A + S L A V + P + L +C+ T SPT LEW
Sbjct: 1840 CTGSNMFAMDQGTATLHVQASGTLSAPVVSIHPPQLTVQPGQLAEFRCSATGSPTPTLEW 1899
Query: 38 VLLRPTGGAPA 6
P G PA
Sbjct: 1900 T-GGPGGQLPA 1909
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = -1
Query: 218 CVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDLGRHQCAVT*SPTSALEW 39
C S + +D A + S L A V + P + L +C+ T SPT LEW
Sbjct: 1840 CTGSNMFAMDQGTATLHVQASGTLSAPVVSIHPPQLTVQPGQLAEFRCSATGSPTPTLEW 1899
Query: 38 VLLRPTGGAPA 6
P G PA
Sbjct: 1900 T-GGPGGQLPA 1909
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = -1
Query: 218 CVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDLGRHQCAVT*SPTSALEW 39
C S + +D A + S L A V + P + L +C+ T SPT LEW
Sbjct: 1840 CTGSNMFAMDQGTATLHVQASGTLSAPVVSIHPPQLTVQPGQLAEFRCSATGSPTPTLEW 1899
Query: 38 VLLRPTGGAPA 6
P G PA
Sbjct: 1900 T-GGPGGQLPA 1909
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 33.5 bits (73), Expect = 0.18
Identities = 22/71 (30%), Positives = 29/71 (40%)
Frame = -1
Query: 218 CVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDLGRHQCAVT*SPTSALEW 39
C S + +D A + S L A V + P + L +C+ T SPT LEW
Sbjct: 1819 CTGSNMFAMDQGTATLHVQASGTLSAPVVSIHPPQLTVQPGQLAEFRCSATGSPTPTLEW 1878
Query: 38 VLLRPTGGAPA 6
P G PA
Sbjct: 1879 T-GGPGGQLPA 1888
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,821,853
Number of Sequences: 237096
Number of extensions: 1227462
Number of successful extensions: 2359
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2359
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1968306988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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