Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_P24
(344 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 84 3e-17
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 80 4e-16
Z81030-5|CAB02709.1| 324|Caenorhabditis elegans Hypothetical pr... 30 0.51
U41271-3|AAP31439.1| 577|Caenorhabditis elegans Hypothetical pr... 29 0.89
U41271-2|AAA82444.3| 713|Caenorhabditis elegans Hypothetical pr... 29 0.89
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 29 1.2
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 29 1.2
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 28 1.6
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 27 2.7
U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical pr... 27 2.7
U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical pr... 27 2.7
Z75955-6|CAB00120.1| 451|Caenorhabditis elegans Hypothetical pr... 26 6.3
AF036704-5|AAB88558.2| 360|Caenorhabditis elegans Hypothetical ... 26 6.3
Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical pr... 26 8.3
Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical pr... 26 8.3
Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical pr... 26 8.3
Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical pr... 26 8.3
U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical pr... 26 8.3
L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical pr... 26 8.3
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr... 26 8.3
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 83.8 bits (198), Expect = 3e-17
Identities = 38/51 (74%), Positives = 44/51 (86%)
Frame = -1
Query: 242 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 90
M S ELACVY+ALIL DD+VA+TGEKI+T+LKAA V+ EPYWPGLFAK L
Sbjct: 1 MASNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPYWPGLFAKAL 51
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 80.2 bits (189), Expect = 4e-16
Identities = 37/51 (72%), Positives = 43/51 (84%)
Frame = -1
Query: 242 MVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDL 90
M S ELACVY+ALIL DD+VA+TGEKI+T+LKAA V+ EP WPGLFAK L
Sbjct: 1 MASNQELACVYAALILQDDEVAITGEKIATLLKAANVEFEPNWPGLFAKAL 51
>Z81030-5|CAB02709.1| 324|Caenorhabditis elegans Hypothetical
protein C01G10.7 protein.
Length = 324
Score = 29.9 bits (64), Expect = 0.51
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = -1
Query: 254 SKLKMVSKAELACVYSALILVDDDVAVTGEKISTILKAAAVDVEPYWPGLFAKDLG 87
S KM+ K + S ++ ++D VA+T + + + AAA+D PY L ++LG
Sbjct: 34 SNQKMLDKVPMMQADSVVLELEDGVALTAKADARVRAAAALDKLPYHT-LACQELG 88
>U41271-3|AAP31439.1| 577|Caenorhabditis elegans Hypothetical
protein C46H3.2b protein.
Length = 577
Score = 29.1 bits (62), Expect = 0.89
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 106 CSPKTLEGINVP*PDHRHRLWSGCCSGRLVERQP 5
C+P L + + PDHR +L S S +++++ P
Sbjct: 231 CTPADLLSLGIKNPDHRKKLMSDIHSWKIIDQWP 264
>U41271-2|AAA82444.3| 713|Caenorhabditis elegans Hypothetical
protein C46H3.2a protein.
Length = 713
Score = 29.1 bits (62), Expect = 0.89
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 106 CSPKTLEGINVP*PDHRHRLWSGCCSGRLVERQP 5
C+P L + + PDHR +L S S +++++ P
Sbjct: 367 CTPADLLSLGIKNPDHRKKLMSDIHSWKIIDQWP 400
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical protein
R03E1.1 protein.
Length = 1043
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 17 HQSAGAAPTPEPMSVIRSRHIDAFQGLWRTDLANMALHLQPPLSRWWKFSHQLRQHHHP 193
H AA +P+ +I D F +WR +AL ++ + WW+ ++R H+ P
Sbjct: 893 HSQIRAAFSPDGRHIICGSE-DKFVYIWRASDTTVALSVRKDRNSWWE---RVRTHNAP 947
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +2
Query: 17 HQSAGAAPTPEPMSVIRSRHIDAFQGLWRTDLANMALHLQPPLSRWWKFSHQLRQHHHP 193
H AA +P+ +I D F +WR +AL ++ + WW+ ++R H+ P
Sbjct: 893 HSQIRAAFSPDGRHIICGSE-DKFVYIWRASDTTVALSVRKDRNSWWE---RVRTHNAP 947
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/64 (29%), Positives = 28/64 (43%)
Frame = -3
Query: 252 KTKNGVKS*ISMCLLCSHPGG**CCRNW*ENFHHLESGGCRCRAILARSVRQRPWKASMC 73
K N S S+C +C+H G W E + GC CR RS + + KA +
Sbjct: 5007 KDYNESFSQFSICNICNHGGHVNHIATWFETEKYCPVAGCDCRC--QRSKQTKHLKARLR 5064
Query: 72 RDLI 61
R ++
Sbjct: 5065 RHML 5068
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 139 AAFKMVEIFSPVTATSSSTRMRAE*THANSAFDTIFS 249
A M EIFSPV++T+ R + S +DTI S
Sbjct: 2794 AGIPMDEIFSPVSSTADGNRRFSNFYEDRSGWDTIGS 2830
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +1
Query: 139 AAFKMVEIFSPVTATSSSTRMRAE*THANSAFDTIFS 249
A M EIFSPV++T+ R + S +DTI S
Sbjct: 2794 AGIPMDEIFSPVSSTADGNRRFSNFYEDRSGWDTIGS 2830
>U41532-4|AAK68320.1| 767|Caenorhabditis elegans Hypothetical
protein F11D5.3b protein.
Length = 767
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 78 LMPSKVFGEQTWPIWLYIYSRR 143
+ PSK++ EQ P W Y SRR
Sbjct: 724 MCPSKLYNEQILPCWNYESSRR 745
>U41532-3|AAK68319.1| 797|Caenorhabditis elegans Hypothetical
protein F11D5.3a protein.
Length = 797
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +3
Query: 78 LMPSKVFGEQTWPIWLYIYSRR 143
+ PSK++ EQ P W Y SRR
Sbjct: 754 MCPSKLYNEQILPCWNYESSRR 775
>Z75955-6|CAB00120.1| 451|Caenorhabditis elegans Hypothetical
protein R07B7.11 protein.
Length = 451
Score = 26.2 bits (55), Expect = 6.3
Identities = 8/32 (25%), Positives = 21/32 (65%)
Frame = -1
Query: 239 VSKAELACVYSALILVDDDVAVTGEKISTILK 144
+S+ + C++SA +++ +D+ + G+ +LK
Sbjct: 265 ISQFTVWCIWSAPLIMSNDLRIIGDSFKDVLK 296
>AF036704-5|AAB88558.2| 360|Caenorhabditis elegans Hypothetical
protein ZK185.1 protein.
Length = 360
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 220 ANSAFDTIFSFERASCRRP*LKREQARLSSDNK 318
A++++ IFSF + R +KRE AR S + +
Sbjct: 190 ASTSYTIIFSFHKVDKARRRIKREMARKSLERR 222
>Z75552-8|CAD54158.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 25.8 bits (54), Expect = 8.3
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 34 STHSR----ADVGDQVTAH*CLPRSLANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRM 201
STHS A T L S + PG S+S + + K ++ VTA SSS+
Sbjct: 615 STHSLDAAIAAAASNSTMQNLLTVSYGSNPGPLDSSSNSESMKTIKKSFTVTAASSSSLP 674
Query: 202 RAE 210
AE
Sbjct: 675 LAE 677
>Z75552-7|CAA99943.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 25.8 bits (54), Expect = 8.3
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 34 STHSR----ADVGDQVTAH*CLPRSLANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRM 201
STHS A T L S + PG S+S + + K ++ VTA SSS+
Sbjct: 620 STHSLDAAIAAAASNSTMQNLLTVSYGSNPGPLDSSSNSESMKTIKKSFTVTAASSSSLP 679
Query: 202 RAE 210
AE
Sbjct: 680 LAE 682
>Z75539-5|CAD54134.1| 939|Caenorhabditis elegans Hypothetical
protein F28C1.3b protein.
Length = 939
Score = 25.8 bits (54), Expect = 8.3
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 34 STHSR----ADVGDQVTAH*CLPRSLANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRM 201
STHS A T L S + PG S+S + + K ++ VTA SSS+
Sbjct: 615 STHSLDAAIAAAASNSTMQNLLTVSYGSNPGPLDSSSNSESMKTIKKSFTVTAASSSSLP 674
Query: 202 RAE 210
AE
Sbjct: 675 LAE 677
>Z75539-4|CAA99846.3| 944|Caenorhabditis elegans Hypothetical
protein F28C1.3a protein.
Length = 944
Score = 25.8 bits (54), Expect = 8.3
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
Frame = +1
Query: 34 STHSR----ADVGDQVTAH*CLPRSLANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRM 201
STHS A T L S + PG S+S + + K ++ VTA SSS+
Sbjct: 620 STHSLDAAIAAAASNSTMQNLLTVSYGSNPGPLDSSSNSESMKTIKKSFTVTAASSSSLP 679
Query: 202 RAE 210
AE
Sbjct: 680 LAE 682
>U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical
protein D1005.1 protein.
Length = 1106
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +2
Query: 23 SAGAAPTPEPMSVIRSRHIDAFQGLWRTD 109
+A A PT P++ + + +F+GL+ D
Sbjct: 468 AANATPTEHPLTTAQQNKLKSFRGLFEDD 496
>L13200-2|ABE73330.1| 810|Caenorhabditis elegans Hypothetical
protein ZK1236.3b protein.
Length = 810
Score = 25.8 bits (54), Expect = 8.3
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 22 VGRSSTHSRADVGDQVTAH*CLPRSLANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRM 201
+GR + DQV H + R + RP G++ST++ + TATSS
Sbjct: 738 IGRPVVDRKKKSIDQVMNH--IHRMHSQRPPSMGNSSTSSEASSTSPTNAATATSSPASN 795
Query: 202 R 204
R
Sbjct: 796 R 796
>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical protein
ZK1236.3a protein.
Length = 1000
Score = 25.8 bits (54), Expect = 8.3
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 22 VGRSSTHSRADVGDQVTAH*CLPRSLANRPGQYGSTSTAAAFKMVEIFSPVTATSSSTRM 201
+GR + DQV H + R + RP G++ST++ + TATSS
Sbjct: 928 IGRPVVDRKKKSIDQVMNH--IHRMHSQRPPSMGNSSTSSEASSTSPTNAATATSSPASN 985
Query: 202 R 204
R
Sbjct: 986 R 986
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,785,135
Number of Sequences: 27780
Number of extensions: 184182
Number of successful extensions: 481
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 451081596
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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