Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P11_pT_P22
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 221 4e-58
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 221 4e-58
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 221 4e-58
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 221 4e-58
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 221 4e-58
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 221 4e-58
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 221 4e-58
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 221 4e-58
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 221 4e-58
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 215 3e-56
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 210 7e-55
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 118 3e-27
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 107 7e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 90 9e-19
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 83 2e-16
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 77 9e-15
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 55 4e-08
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 55 4e-08
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical... 29 3.2
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 7.3
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 9.6
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 9.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 221 bits (539), Expect = 4e-58
Identities = 101/108 (93%), Positives = 105/108 (97%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
GMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KI
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 328
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 252
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 221 bits (539), Expect = 4e-58
Identities = 101/108 (93%), Positives = 105/108 (97%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
GMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KI
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 328
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 252
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 221 bits (539), Expect = 4e-58
Identities = 101/108 (93%), Positives = 105/108 (97%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
GMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KI
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 328
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 252
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 221 bits (539), Expect = 4e-58
Identities = 101/108 (93%), Positives = 105/108 (97%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
GMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KI
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 328
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 252
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 221 bits (539), Expect = 4e-58
Identities = 101/108 (93%), Positives = 105/108 (97%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
GMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KI
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 328
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 252
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 221 bits (539), Expect = 4e-58
Identities = 101/108 (93%), Positives = 105/108 (97%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
GMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KI
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 328
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 252
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 221 bits (539), Expect = 4e-58
Identities = 101/108 (93%), Positives = 105/108 (97%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
GMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KI
Sbjct: 225 GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 284
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 252
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 285 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 221 bits (539), Expect = 4e-58
Identities = 101/108 (93%), Positives = 105/108 (97%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
GMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KI
Sbjct: 255 GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 314
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 252
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 315 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 221 bits (539), Expect = 4e-58
Identities = 101/108 (93%), Positives = 105/108 (97%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
GMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KI
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 328
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 252
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 329 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 215 bits (524), Expect = 3e-56
Identities = 100/108 (92%), Positives = 104/108 (96%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
GMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRMQKEITALAP T+KI
Sbjct: 269 GMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP-TMKI 327
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 252
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 210 bits (512), Expect = 7e-55
Identities = 96/108 (88%), Positives = 101/108 (93%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
GME GIHET Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRMQKEI LAPST+KI
Sbjct: 268 GMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRMQKEIQHLAPSTMKI 327
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 252
KIIAPPERKYSVWIGGSILASLSTFQQMWISK+EYDESGP IVHRKCF
Sbjct: 328 KIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 118 bits (284), Expect = 3e-27
Identities = 53/108 (49%), Positives = 75/108 (69%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
G E G+ V SIMKCDVD+R+ LY+N V+SGGTT++ G DR+ E+ +AP+ KI
Sbjct: 267 GTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRLLGEMRKIAPADGKI 326
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRKCF 252
+I A ER WIGGSI+ASL TF++MW+ K+EY++ G +H++ F
Sbjct: 327 RISASQERNSLTWIGGSIVASLDTFRKMWLGKKEYEDMGASAMHKRFF 374
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 107 bits (256), Expect = 7e-24
Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Frame = -1
Query: 521 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPP---ERKYSVWIG 351
D+DIR L++N ++GG ++ G +R+ + P TIK+++ A P ERKY WIG
Sbjct: 344 DIDIRPTLFSNVTVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIG 403
Query: 350 GSILASLSTFQQMWISKEEYDESGPGIVHRKC 255
GSIL SL TFQQMW+SK EYDESG IV +KC
Sbjct: 404 GSILGSLGTFQQMWVSKAEYDESGKSIVEKKC 435
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 90.2 bits (214), Expect = 9e-19
Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 13/111 (11%)
Frame = -1
Query: 572 MESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-------- 417
+E G+ E ++ I D+D R D Y + V+SGGTTMYPG+ R++KE+ L
Sbjct: 273 VEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRLEKELKQLYLDRVLHG 332
Query: 416 ---APSTIKIKIIAPPERKYSVWIGGSILASL--STFQQMWISKEEYDESG 279
A KI+I APP RK+ V++GG++LA+L Q W+SK+EY+E G
Sbjct: 333 NTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLMKDRDQDFWVSKKEYEEGG 383
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 82.6 bits (195), Expect = 2e-16
Identities = 31/94 (32%), Positives = 65/94 (69%)
Frame = -1
Query: 575 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 396
G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGIA+++++E++ + P+TI
Sbjct: 446 GLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLEQELSTVVPNTIHT 505
Query: 395 KIIAPPERKYSVWIGGSILASLSTFQQMWISKEE 294
++ P R + ++G I+AS STF+ IS ++
Sbjct: 506 QVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 77.0 bits (181), Expect = 9e-15
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 16/112 (14%)
Frame = -1
Query: 557 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALA------------ 414
I +T+ I +C +D+R+ LY N V+SGG+TM+ A ++Q+++ L+
Sbjct: 303 ISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKLQRDVKRLSDGRLQMSETLSG 362
Query: 413 ----PSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 270
P I +++I+ ++Y+VW GGS+LAS S F Q+ +K EY E GP I
Sbjct: 363 GRLKPKPIDVQVISHKMQRYAVWFGGSMLASTSEFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 54.8 bits (126), Expect = 4e-08
Identities = 27/104 (25%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Frame = -1
Query: 572 MESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 393
++ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ +
Sbjct: 284 IDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLN 343
Query: 392 I---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 270
+ + P+ W G L L+ + WI+++++DE G +
Sbjct: 344 VSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 54.8 bits (126), Expect = 4e-08
Identities = 27/104 (25%), Positives = 57/104 (54%), Gaps = 3/104 (2%)
Frame = -1
Query: 572 MESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKIK 393
++ CG+ E V SI +C +R L N ++ GG++ +PG +R+++E+ ++ P+ +
Sbjct: 284 IDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERLEREVRSMLPAEYGLN 343
Query: 392 I---IAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 270
+ + P+ W G L L+ + WI+++++DE G +
Sbjct: 344 VSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDERGDSL 383
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 48.0 bits (109), Expect = 5e-06
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Frame = -1
Query: 545 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL-APSTIKIKIIAP---- 381
++ + KC +D+RK L+ N +++GG + PG+ R+++EI + + KI +I
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQF 253
Query: 380 PERK----YSVWIGGSILASL-STFQQMWISKEEY 291
E K + W+G S+L SL T ++ ++ EE+
Sbjct: 254 SEIKNTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = -3
Query: 558 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 415
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>AF100306-10|AAC68926.1| 798|Caenorhabditis elegans Hypothetical
protein T24C4.7 protein.
Length = 798
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 459 PRYRRQDAEGDHRPRALDHQDQDHRSPREEVLR 361
P+YRRQ L Q Q HR PRE +L+
Sbjct: 181 PKYRRQVMHCSKSEHKLVLQTQKHRLPRERMLK 213
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 7.3
Identities = 17/66 (25%), Positives = 21/66 (31%)
Frame = -3
Query: 534 HHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMD 355
HH H G H H HH P + E H P H + H +P +
Sbjct: 432 HHHAPAHH--GHHESHGHG---HHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGHHGE 486
Query: 354 RWIHPG 337
H G
Sbjct: 487 HGTHHG 492
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 417 RALDHQDQDHRSPREEVLRMDRW 349
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 417 RALDHQDQDHRSPREEVLRMDRW 349
R +D D + R EE++R DRW
Sbjct: 134 RFVDVNDNEIREANEEIIRKDRW 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,521,686
Number of Sequences: 27780
Number of extensions: 222452
Number of successful extensions: 699
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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