Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P11_pT_P21
         (665 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46787-10|CAA86749.1|  154|Caenorhabditis elegans Hypothetical p...    60   1e-09
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    29   3.0  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    29   3.0  
U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in bl...    27   9.1  
AF099002-3|AAO91691.1|  570|Caenorhabditis elegans Hypothetical ...    27   9.1  
AF099002-2|AAC68740.2|  556|Caenorhabditis elegans Hypothetical ...    27   9.1  
AF099002-1|AAK68587.1|  559|Caenorhabditis elegans Hypothetical ...    27   9.1  

>Z46787-10|CAA86749.1|  154|Caenorhabditis elegans Hypothetical
           protein C16C10.11 protein.
          Length = 154

 Score = 60.5 bits (140), Expect = 1e-09
 Identities = 29/67 (43%), Positives = 38/67 (56%)
 Frame = -1

Query: 533 GMFSGGGSSEXXXXXXXXXXXQTYNQYQGQPAQGPCAWEIKQFLECAQQQHDLSLCDGFN 354
           GMF+GGGSS                Q  G     PC +E +QF++CAQ Q D+SLC+GFN
Sbjct: 86  GMFTGGGSSHAEQAPAAAAAPAGAPQASGYSQ--PCEFEWRQFVDCAQNQSDVSLCNGFN 143

Query: 353 EALRQCK 333
           +  +QCK
Sbjct: 144 DIFKQCK 150


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
            F53B7.5b protein.
          Length = 2892

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -3

Query: 660  SIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 550
            ++ P   ++ST+AA        + W  W +C   CGSCG
Sbjct: 2796 TLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
            F53B7.5a protein.
          Length = 3095

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -3

Query: 660  SIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 550
            ++ P   ++ST+AA        + W  W +C   CGSCG
Sbjct: 2796 TLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
            protein F53B7.5b protein.
          Length = 2892

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -3

Query: 660  SIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 550
            ++ P   ++ST+AA        + W  W +C   CGSCG
Sbjct: 2796 TLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
            protein F53B7.5a protein.
          Length = 3095

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = -3

Query: 660  SIDPGYDSSSTSAALAIRADGCHGW--WRSCRIGCGSCG 550
            ++ P   ++ST+AA        + W  W +C   CGSCG
Sbjct: 2796 TLAPAATTTSTAAASDCSTSTWNAWQEWSTCTETCGSCG 2834


>U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 10 protein.
          Length = 375

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = -1

Query: 464 YNQYQGQPAQGPCAWEIKQ---FLECAQQQHDLSLC 366
           Y Q Q  PAQ PCA + +Q      CA  Q D   C
Sbjct: 51  YTQVQQAPAQDPCACQPQQQQPACNCAPVQQDPCAC 86


>AF099002-3|AAO91691.1|  570|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1c protein.
          Length = 570

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -3

Query: 195 YFDYQTSTLSNLRHLPSSYYF*CKRKFCFP 106
           Y D   S+  NL H PS YYF    K C P
Sbjct: 440 YADVYASSCYNLVHYPSFYYFRAPMK-CMP 468


>AF099002-2|AAC68740.2|  556|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1a protein.
          Length = 556

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -3

Query: 195 YFDYQTSTLSNLRHLPSSYYF*CKRKFCFP 106
           Y D   S+  NL H PS YYF    K C P
Sbjct: 426 YADVYASSCYNLVHYPSFYYFRAPMK-CMP 454


>AF099002-1|AAK68587.1|  559|Caenorhabditis elegans Hypothetical
           protein Y71H10B.1b protein.
          Length = 559

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -3

Query: 195 YFDYQTSTLSNLRHLPSSYYF*CKRKFCFP 106
           Y D   S+  NL H PS YYF    K C P
Sbjct: 429 YADVYASSCYNLVHYPSFYYFRAPMK-CMP 457


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,614,151
Number of Sequences: 27780
Number of extensions: 238275
Number of successful extensions: 555
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 554
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)